RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 RPL7AP62424 266 aaKnown RBP11.21□□□□□ -0.61
PCDHGC3-202ENST00000611950 RNASELQ05823 741 aaKnown RBP11.21□□□□□ -0.61
PCDHGC3-202ENST00000611950 XRCC4Q13426 336 aa11.21□□□□□ -0.61
PCDHGC3-202ENST00000611950 DRP2Q13474 957 aa11.21□□□□□ -0.61
PCDHGC3-202ENST00000611950 SKIV2LQ15477 1246 aaKnown RBP11.21□□□□□ -0.61
PCDHGC3-202ENST00000611950 P3H1Q32P28 736 aa11.21□□□□□ -0.61
PCDHGC3-202ENST00000611950 IZUMO3Q5VZ72 239 aa11.21□□□□□ -0.61
PCDHGC3-202ENST00000611950 MCOLN2Q8IZK6 566 aa11.21□□□□□ -0.61
PCDHGC3-202ENST00000611950 KIFAP3Q92845 792 aa11.21□□□□□ -0.61
PCDHGC3-202ENST00000611950 NDNQ99608 321 aa11.21□□□□□ -0.61
PCDHGC3-202ENST00000611950 SLCO1B3Q9NPD5 702 aa11.21□□□□□ -0.61
PCDHGC3-202ENST00000611950 MRGBPQ9NV56 204 aa11.21□□□□□ -0.61
PCDHGC3-202ENST00000611950 CIDEBQ9UHD4 219 aa11.21□□□□□ -0.61
PCDHGC3-202ENST00000611950 LNPEPQ9UIQ6 1025 aa11.21□□□□□ -0.61
PCDHGC3-202ENST00000611950 GGA2Q9UJY4 613 aa11.21□□□□□ -0.61
PCDHGC3-202ENST00000611950 MKI67P46013 3256 aaKnown RBP11.21□□□□□ -0.62
PCDHGC3-202ENST00000611950 WDR91A4D1P6 747 aa11.21□□□□□ -0.62
PCDHGC3-202ENST00000611950 ALDH5A1P51649 535 aaPredicted RBP11.21□□□□□ -0.62
PCDHGC3-202ENST00000611950 PLCB3Q01970 1234 aa11.21□□□□□ -0.62
PCDHGC3-202ENST00000611950 CYP24A1Q07973 514 aa11.21□□□□□ -0.62
PCDHGC3-202ENST00000611950 DNAJC3Q13217 504 aa11.21□□□□□ -0.62
PCDHGC3-202ENST00000611950 BAATQ14032 418 aaPredicted RBP11.21□□□□□ -0.62
PCDHGC3-202ENST00000611950 SLC17A8Q8NDX2 589 aa11.21□□□□□ -0.62
PCDHGC3-202ENST00000611950 ZNF570Q96NI8 536 aa11.21□□□□□ -0.62
PCDHGC3-202ENST00000611950 FNBP1Q96RU3 617 aa11.21□□□□□ -0.62
PCDHGC3-202ENST00000611950 DCLK3Q9C098 648 aa11.21□□□□□ -0.62
PCDHGC3-202ENST00000611950 PCSK1NQ9UHG2 260 aa11.21□□□□□ -0.62
PCDHGC3-202ENST00000611950 NAALADL1Q9UQQ1 740 aa11.21□□□□□ -0.62
PCDHGC3-202ENST00000611950 PCDHB4Q9Y5E5 795 aa11.21□□□□□ -0.62
PCDHGC3-202ENST00000611950 SRRM3A6NNA2 597 aaPredicted RBP11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 RASA4BC9J798 803 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 RASA4O43374 803 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 TTC4O95801 387 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 GAS8O95995 478 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 KRT16P08779 473 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 IVDP26440 423 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 JAK3P52333 1124 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 TXNRD3NBQ6F5E7 133 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 ANKMY2Q8IV38 441 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 FITM2Q8N6M3 262 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 ACMSDQ8TDX5 336 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 KLHL29Q96CT2 875 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 ATG4CQ96DT6 458 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 TMEM237Q96Q45 408 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 TIPINQ9BVW5 301 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 EIF2AQ9BY44 585 aaKnown RBP11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 NSRP1Q9H0G5 558 aaKnown RBP11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 LRRC19Q9H756 370 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 DOCK5Q9H7D0 1870 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 SAYSD1Q9NPB0 183 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 ATAD3AQ9NVI7 634 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 ACAD8Q9UKU7 415 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 KIAA1257Q9ULG3 409 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 COQ4Q9Y3A0 265 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 USP15Q9Y4E8 981 aaPredicted RBP11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 SQORQ9Y6N5 450 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 LRRIQ4A6NIV6 560 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 ASAP2O43150 1006 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 HLA-DRAP01903 254 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 LIG4P49917 911 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 GPC3P51654 580 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 NCALDP61601 193 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 SNRPFP62306 86 aaKnown RBP11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 KRT76Q01546 638 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 GAD2Q05329 585 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 KCTD2Q14681 263 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 CYP1B1Q16678 543 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 MUM1Q2TAK8 710 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 LACTB2Q53H82 288 aaPredicted RBP11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 SCARA5Q6ZMJ2 495 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 ARHGAP18Q8N392 663 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 AGAP11Q8TF27 550 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 RUNDC3BQ96NL0 473 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 RBM15Q96T37 977 aaKnown RBP eCLIP11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 MOV10L1Q9BXT6 1211 aaKnown RBP11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 ALG13Q9NP73 1137 aaKnown RBP11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 ANKEF1Q9NU02 776 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 ADAM22Q9P0K1 906 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 UVRAGQ9P2Y5 699 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 ZNF180Q9UJW8 692 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 ZNF148Q9UQR1 794 aa11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 KIAA0100Q14667 2235 aaKnown RBP11.2□□□□□ -0.62
PCDHGC3-202ENST00000611950 DPPA5A6NC42 116 aa11.19□□□□□ -0.62
PCDHGC3-202ENST00000611950 VWA5AO00534 786 aa11.19□□□□□ -0.62
PCDHGC3-202ENST00000611950 FSCN2O14926 492 aa11.19□□□□□ -0.62
PCDHGC3-202ENST00000611950 STBD1O95210 358 aa11.19□□□□□ -0.62
PCDHGC3-202ENST00000611950 UBL4AP11441 157 aa11.19□□□□□ -0.62
PCDHGC3-202ENST00000611950 BTF3P20290 206 aaKnown RBP11.19□□□□□ -0.62
PCDHGC3-202ENST00000611950 SFNP31947 248 aa11.19□□□□□ -0.62
PCDHGC3-202ENST00000611950 NRLP54845 237 aa11.19□□□□□ -0.62
PCDHGC3-202ENST00000611950 NOP14P78316 857 aaKnown RBP11.19□□□□□ -0.62
PCDHGC3-202ENST00000611950 PKN2Q16513 984 aaKnown RBP11.19□□□□□ -0.62
PCDHGC3-202ENST00000611950 BCL2A1Q16548 175 aa11.19□□□□□ -0.62
PCDHGC3-202ENST00000611950 SMTNL2Q2TAL5 461 aa11.19□□□□□ -0.62
PCDHGC3-202ENST00000611950 ALKBH2Q6NS38 261 aa11.19□□□□□ -0.62
PCDHGC3-202ENST00000611950 PCGF5Q86SE9 256 aa11.19□□□□□ -0.62
PCDHGC3-202ENST00000611950 NLRX1Q86UT6 975 aa11.19□□□□□ -0.62
PCDHGC3-202ENST00000611950 GIPC2Q8TF65 315 aa11.19□□□□□ -0.62
PCDHGC3-202ENST00000611950 DDX27Q96GQ7 796 aaKnown RBP11.19□□□□□ -0.62
PCDHGC3-202ENST00000611950 FBXL18Q96ME1 805 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms