RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 PDCD6IPQ8WUM4 868 aaKnown RBP13.7□□□□□ -0.22
TCF3-220ENST00000611869 ITGA11Q9UKX5 1188 aa13.7□□□□□ -0.22
TCF3-220ENST00000611869 PRG3Q9Y2Y8 225 aaPredicted RBP13.7□□□□□ -0.22
TCF3-220ENST00000611869 AHDC1Q5TGY3 1603 aaPredicted RBP13.7□□□□□ -0.22
TCF3-220ENST00000611869 A0A0B4J269 797 aa13.7□□□□□ -0.22
TCF3-220ENST00000611869 E5RJQ4 531 aa13.7□□□□□ -0.22
TCF3-220ENST00000611869 EPHB2P29323 1055 aa13.7□□□□□ -0.22
TCF3-220ENST00000611869 BCAT1P54687 386 aa13.7□□□□□ -0.22
TCF3-220ENST00000611869 EPHB1P54762 984 aa13.7□□□□□ -0.22
TCF3-220ENST00000611869 MYLK4Q86YV6 388 aaPredicted RBP13.7□□□□□ -0.22
TCF3-220ENST00000611869 LRRC57Q8N9N7 239 aa13.7□□□□□ -0.22
TCF3-220ENST00000611869 SKA2Q8WVK7 121 aaPredicted RBP13.7□□□□□ -0.22
TCF3-220ENST00000611869 ALKBH8Q96BT7 664 aaKnown RBP13.7□□□□□ -0.22
TCF3-220ENST00000611869 ZBTB10Q96DT7 871 aa13.7□□□□□ -0.22
TCF3-220ENST00000611869 BTBD7Q9P203 1132 aa13.7□□□□□ -0.22
TCF3-220ENST00000611869 ARHGAP28Q9P2N2 729 aa13.7□□□□□ -0.22
TCF3-220ENST00000611869 SNRPAP09012 282 aaKnown RBP13.7□□□□□ -0.22
TCF3-220ENST00000611869 FLT3P36888 993 aa13.7□□□□□ -0.22
TCF3-220ENST00000611869 THPOP40225 353 aa13.7□□□□□ -0.22
TCF3-220ENST00000611869 KPNA2P52292 529 aaKnown RBP13.7□□□□□ -0.22
TCF3-220ENST00000611869 PDK1Q15118 436 aa13.7□□□□□ -0.22
TCF3-220ENST00000611869 LRRC6Q86X45 466 aa13.7□□□□□ -0.22
TCF3-220ENST00000611869 RNF135Q8IUD6 432 aa13.7□□□□□ -0.22
TCF3-220ENST00000611869 PARP9Q8IXQ6 854 aa13.7□□□□□ -0.22
TCF3-220ENST00000611869 NDUFAF2Q8N183 169 aa13.7□□□□□ -0.22
TCF3-220ENST00000611869 ATP5HO75947 161 aa13.7□□□□□ -0.22
TCF3-220ENST00000611869 PAMP19021 973 aa13.7□□□□□ -0.22
TCF3-220ENST00000611869 TNFRSF8P28908 595 aa13.7□□□□□ -0.22
TCF3-220ENST00000611869 ADSSP30520 456 aa13.7□□□□□ -0.22
TCF3-220ENST00000611869 ELF1P32519 619 aa13.7□□□□□ -0.22
TCF3-220ENST00000611869 ZNF268Q14587 947 aaPredicted RBP13.7□□□□□ -0.22
TCF3-220ENST00000611869 KCNV2Q8TDN2 545 aa13.7□□□□□ -0.22
TCF3-220ENST00000611869 HASPINQ8TF76 798 aa13.7□□□□□ -0.22
TCF3-220ENST00000611869 AP4E1Q9UPM8 1137 aa13.7□□□□□ -0.22
TCF3-220ENST00000611869 USH1CQ9Y6N9 552 aa13.7□□□□□ -0.22
TCF3-220ENST00000611869 SPECC1L-ADORA2AF8WAN1 911 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 USP2O75604 605 aaPredicted RBP13.69□□□□□ -0.22
TCF3-220ENST00000611869 APOEP02649 317 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 HMBSP08397 361 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 ETS1P14921 441 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 HOXD13P35453 343 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 TPD52P55327 224 aaPredicted RBP13.69□□□□□ -0.22
TCF3-220ENST00000611869 TAS2R40P59535 323 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 OVGP1Q12889 678 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 ACVR2BQ13705 512 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 ARHGEF6Q15052 776 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 PRAMEF19Q5SWL8 479 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 PWWP2AQ96N64 755 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 SP110Q9HB58 689 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 PCDH9Q9HC56 1237 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 NINJ2Q9NZG7 142 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 BCAP29Q9UHQ4 241 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 DNALI1O14645 258 aaPredicted RBP13.69□□□□□ -0.22
TCF3-220ENST00000611869 ASS1P00966 412 aaKnown RBP13.69□□□□□ -0.22
TCF3-220ENST00000611869 SSTR1P30872 391 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 ZNF280AP59817 542 aaPredicted RBP13.69□□□□□ -0.22
TCF3-220ENST00000611869 TAF11Q15544 211 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 MAP3K21Q5TCX8 1036 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 SLC27A1Q6PCB7 646 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 DENND5BQ6ZUT9 1274 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 RFX8Q6ZV50 586 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 KATNAL2Q8IYT4 538 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 FAM111AQ96PZ2 611 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 VCXQ9H320 206 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 UMODL1Q5DID0 1318 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 SMAPO00193 183 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 DHX15O43143 795 aaKnown RBP13.69□□□□□ -0.22
TCF3-220ENST00000611869 CST3P01034 146 aaPredicted RBP13.69□□□□□ -0.22
TCF3-220ENST00000611869 RGS2P41220 211 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 MDH1BQ5I0G3 518 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 DUPD1Q68J44 220 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 GMLQ99445 158 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 ST6GALNAC4Q9H4F1 302 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 DONSONQ9NYP3 566 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 TNFSF13BQ9Y275 285 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 NR2E1Q9Y466 385 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 ZNF536O15090 1300 aa13.69□□□□□ -0.22
TCF3-220ENST00000611869 C3orf70A6NLC5 250 aaPredicted RBP13.68□□□□□ -0.22
TCF3-220ENST00000611869 DRP2Q13474 957 aa13.68□□□□□ -0.22
TCF3-220ENST00000611869 C15orf59Q2T9L4 293 aaPredicted RBP13.68□□□□□ -0.22
TCF3-220ENST00000611869 PAFAH2Q99487 392 aa13.68□□□□□ -0.22
TCF3-220ENST00000611869 PPCSQ9HAB8 311 aa13.68□□□□□ -0.22
TCF3-220ENST00000611869 CTNNAL1Q9UBT7 734 aa13.68□□□□□ -0.22
TCF3-220ENST00000611869 PCYOX1Q9UHG3 505 aa13.68□□□□□ -0.22
TCF3-220ENST00000611869 TCRBV7S2A1N4TA0A589 114 aa13.68□□□□□ -0.22
TCF3-220ENST00000611869 KPNA7A9QM74 516 aa13.68□□□□□ -0.22
TCF3-220ENST00000611869 SPAG6O75602 509 aa13.68□□□□□ -0.22
TCF3-220ENST00000611869 PAEPP09466 180 aa13.68□□□□□ -0.22
TCF3-220ENST00000611869 PDK2Q15119 407 aa13.68□□□□□ -0.22
TCF3-220ENST00000611869 RAB44Q7Z6P3 723 aaPredicted RBP13.68□□□□□ -0.22
TCF3-220ENST00000611869 EIF1ADQ8N9N8 165 aaKnown RBP13.68□□□□□ -0.22
TCF3-220ENST00000611869 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.68□□□□□ -0.224e-7■■■□□ 18.8
TCF3-220ENST00000611869 TFB1MQ8WVM0 346 aaKnown RBP13.68□□□□□ -0.22
TCF3-220ENST00000611869 NOP53Q9NZM5 478 aaKnown RBP13.68□□□□□ -0.22
TCF3-220ENST00000611869 CFAP73A6NFT4 308 aa13.68□□□□□ -0.22
TCF3-220ENST00000611869 DDX3YO15523 660 aaKnown RBP13.68□□□□□ -0.22
TCF3-220ENST00000611869 TADA2AO75478 443 aa13.68□□□□□ -0.22
TCF3-220ENST00000611869 RECQL4O94761 1208 aa13.68□□□□□ -0.22
TCF3-220ENST00000611869 OR1G1P47890 313 aa13.68□□□□□ -0.22
TCF3-220ENST00000611869 MAP3K7CLP57077 242 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms