RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 E5RJQ4 531 aa12.49□□□□□ -0.41
SRRT-213ENST00000611405 CD48P09326 243 aa12.49□□□□□ -0.41
SRRT-213ENST00000611405 PDGFRAP16234 1089 aa12.49□□□□□ -0.41
SRRT-213ENST00000611405 CYP4F22Q6NT55 531 aa12.49□□□□□ -0.41
SRRT-213ENST00000611405 C2orf69Q8N8R5 385 aa12.49□□□□□ -0.41
SRRT-213ENST00000611405 PRCCQ92733 491 aaPredicted RBP12.49□□□□□ -0.41
SRRT-213ENST00000611405 CABS1Q96KC9 395 aa12.49□□□□□ -0.41
SRRT-213ENST00000611405 MAK16Q9BXY0 300 aaKnown RBP12.49□□□□□ -0.41
SRRT-213ENST00000611405 NAALADL1Q9UQQ1 740 aa12.49□□□□□ -0.41
SRRT-213ENST00000611405 FARP1Q9Y4F1 1045 aaPredicted RBP12.49□□□□□ -0.41
SRRT-213ENST00000611405 SNX9Q9Y5X1 595 aa12.49□□□□□ -0.41
SRRT-213ENST00000611405 TMEM120BA0PK00 339 aa12.49□□□□□ -0.41
SRRT-213ENST00000611405 MBLAC1A4D2B0 266 aaPredicted RBP12.49□□□□□ -0.41
SRRT-213ENST00000611405 SMAPO00193 183 aa12.49□□□□□ -0.41
SRRT-213ENST00000611405 DPYSL4O14531 572 aa12.49□□□□□ -0.41
SRRT-213ENST00000611405 ADCY6O43306 1168 aa12.49□□□□□ -0.41
SRRT-213ENST00000611405 ENDOD1O94919 500 aa12.49□□□□□ -0.41
SRRT-213ENST00000611405 CPP00450 1065 aa12.49□□□□□ -0.41
SRRT-213ENST00000611405 F2P00734 622 aa12.49□□□□□ -0.41
SRRT-213ENST00000611405 DARSP14868 501 aaKnown RBP12.49□□□□□ -0.41
SRRT-213ENST00000611405 AXLP30530 894 aa12.49□□□□□ -0.41
SRRT-213ENST00000611405 NR1H3Q13133 447 aa12.49□□□□□ -0.41
SRRT-213ENST00000611405 RNF187Q5TA31 235 aaPredicted RBP12.49□□□□□ -0.41
SRRT-213ENST00000611405 VSTM1Q6UX27 236 aa12.49□□□□□ -0.41
SRRT-213ENST00000611405 UNC93AQ86WB7 457 aa12.49□□□□□ -0.41
SRRT-213ENST00000611405 TDRPQ86YL5 185 aa12.49□□□□□ -0.41
SRRT-213ENST00000611405 PPIL6Q8IXY8 311 aa12.49□□□□□ -0.41
SRRT-213ENST00000611405 ZMAT2Q96NC0 199 aaKnown RBP12.49□□□□□ -0.41
SRRT-213ENST00000611405 PTPN18Q99952 460 aa12.49□□□□□ -0.41
SRRT-213ENST00000611405 MRPL45Q9BRJ2 306 aaKnown RBP12.49□□□□□ -0.41
SRRT-213ENST00000611405 EIF2AQ9BY44 585 aaKnown RBP12.49□□□□□ -0.41
SRRT-213ENST00000611405 NSRP1Q9H0G5 558 aaKnown RBP12.49□□□□□ -0.41
SRRT-213ENST00000611405 PPCSQ9HAB8 311 aa12.49□□□□□ -0.41
SRRT-213ENST00000611405 CTNNAL1Q9UBT7 734 aa12.49□□□□□ -0.41
SRRT-213ENST00000611405 GINS2Q9Y248 185 aa12.49□□□□□ -0.41
SRRT-213ENST00000611405 MCF2LO15068 1137 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 CYP2C9P11712 490 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 TMEM62Q0P6H9 643 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 TFDP2Q14188 446 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 PKDCCQ504Y2 493 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 ALKAL1Q6UXT8 129 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 C12orf29Q8N999 325 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 NCAPGQ9BPX3 1015 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 SLC4A5Q9BY07 1137 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 PRDM16Q9HAZ2 1276 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 EURLQ9NYK6 297 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 CNTN3Q9P232 1028 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 SAE1Q9UBE0 346 aaPredicted RBP12.48□□□□□ -0.41
SRRT-213ENST00000611405 PRPSAP2O60256 369 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 BRAFP15056 766 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 CTCFP49711 727 aaPredicted RBP12.48□□□□□ -0.41
SRRT-213ENST00000611405 LIG3P49916 1009 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 EIF3EP60228 445 aaKnown RBP12.48□□□□□ -0.41
SRRT-213ENST00000611405 TAF5Q15542 800 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 FAM47CQ5HY64 1035 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 PPP1R26Q5T8A7 1209 aaPredicted RBP12.48□□□□□ -0.41
SRRT-213ENST00000611405 CCDC121Q6ZUS5 278 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 LRRC34Q8IZ02 419 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 CYP4X1Q8N118 509 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 CCDC197Q8NCU1 140 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 STK32AQ8WU08 396 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 DYDC1Q8WWB3 177 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 P3H4Q92791 437 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 KAT2BQ92831 832 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 PEBP4Q96S96 227 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 TSPAN18Q96SJ8 248 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 CALN1Q9BXU9 219 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 CDHR5Q9HBB8 845 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 KCNK9Q9NPC2 374 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 HESX1Q9UBX0 185 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 TUBGCP4Q9UGJ1 667 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 UBQLN1Q9UMX0 589 aaKnown RBP12.48□□□□□ -0.41
SRRT-213ENST00000611405 GNEQ9Y223 722 aaKnown RBP12.48□□□□□ -0.41
SRRT-213ENST00000611405 EXOC1LA0A1B0GW35 172 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 DESP17661 470 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 RPL22P35268 128 aaKnown RBP12.48□□□□□ -0.41
SRRT-213ENST00000611405 BOLA3Q53S33 107 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 ARHGAP17Q68EM7 881 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 TRNP1Q6NT89 227 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 PIGWQ7Z7B1 504 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 TMEM110Q86TL2 294 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 ACOT1Q86TX2 421 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 SESTD1Q86VW0 696 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 ZDHHC17Q8IUH5 632 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 MAP7D3Q8IWC1 876 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 CCDC13Q8IYE1 715 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 MICALL1Q8N3F8 863 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 OSMRQ99650 979 aa12.48□□□□□ -0.41
SRRT-213ENST00000611405 TRIM6Q9C030 488 aaPredicted RBP12.48□□□□□ -0.41
SRRT-213ENST00000611405 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.48□□□□□ -0.41
SRRT-213ENST00000611405 CITO14578 2027 aa12.47□□□□□ -0.41
SRRT-213ENST00000611405 PPEF2O14830 753 aa12.47□□□□□ -0.41
SRRT-213ENST00000611405 CD4P01730 458 aa12.47□□□□□ -0.41
SRRT-213ENST00000611405 VIMP08670 466 aaKnown RBP12.47□□□□□ -0.41
SRRT-213ENST00000611405 RGS7P49802 495 aa12.47□□□□□ -0.41
SRRT-213ENST00000611405 GDF10P55107 478 aa12.47□□□□□ -0.41
SRRT-213ENST00000611405 CDH6P55285 790 aa12.47□□□□□ -0.41
SRRT-213ENST00000611405 ARL4CP56559 192 aa12.47□□□□□ -0.41
SRRT-213ENST00000611405 SLC6A3Q01959 620 aa12.47□□□□□ -0.41
SRRT-213ENST00000611405 MAP2K5Q13163 448 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms