RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 MFN1Q8IWA4 741 aa17.72■□□□□ 0.43
TNIP1-220ENST00000610535 CYTH2Q99418 400 aa17.72■□□□□ 0.43
TNIP1-220ENST00000610535 TCRBV9S1A1TA0A576 114 aa17.71■□□□□ 0.43
TNIP1-220ENST00000610535 AVILO75366 819 aa17.71■□□□□ 0.43
TNIP1-220ENST00000610535 TGDSO95455 350 aa17.71■□□□□ 0.43
TNIP1-220ENST00000610535 ZCCHC18P0CG32 403 aa17.71■□□□□ 0.43
TNIP1-220ENST00000610535 HARSP12081 509 aaKnown RBP17.71■□□□□ 0.43
TNIP1-220ENST00000610535 RFC1P35251 1148 aaPredicted RBP17.71■□□□□ 0.43
TNIP1-220ENST00000610535 SERPINB4P48594 390 aa17.71■□□□□ 0.43
TNIP1-220ENST00000610535 DLGAP5Q15398 846 aa17.71■□□□□ 0.43
TNIP1-220ENST00000610535 APLFQ8IW19 511 aaPredicted RBP17.71■□□□□ 0.43
TNIP1-220ENST00000610535 ARFGAP1Q8N6T3 406 aa17.71■□□□□ 0.43
TNIP1-220ENST00000610535 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.71■□□□□ 0.43
TNIP1-220ENST00000610535 APOPT1Q96IL0 206 aa17.71■□□□□ 0.43
TNIP1-220ENST00000610535 ZNF184Q99676 751 aaPredicted RBP17.71■□□□□ 0.43
TNIP1-220ENST00000610535 ZNF341Q9BYN7 854 aa17.71■□□□□ 0.43
TNIP1-220ENST00000610535 PDLIM7Q9NR12 457 aa17.71■□□□□ 0.43
TNIP1-220ENST00000610535 TJP2Q9UDY2 1190 aa17.71■□□□□ 0.43
TNIP1-220ENST00000610535 IKBKGQ9Y6K9 419 aa17.71■□□□□ 0.43
TNIP1-220ENST00000610535 LGR5O75473 907 aa17.71■□□□□ 0.43
TNIP1-220ENST00000610535 ITGBL1O95965 494 aaPredicted RBP17.71■□□□□ 0.43
TNIP1-220ENST00000610535 PTPN7P35236 360 aa17.71■□□□□ 0.43
TNIP1-220ENST00000610535 NCOA4Q13772 614 aa17.71■□□□□ 0.43
TNIP1-220ENST00000610535 PIGHQ14442 188 aaPredicted RBP17.71■□□□□ 0.43
TNIP1-220ENST00000610535 CHSY1Q86X52 802 aa17.71■□□□□ 0.43
TNIP1-220ENST00000610535 TMEM143Q96AN5 459 aa17.71■□□□□ 0.43
TNIP1-220ENST00000610535 MMADHCQ9H3L0 296 aaPredicted RBP17.71■□□□□ 0.43
TNIP1-220ENST00000610535 DDX56Q9NY93 547 aaKnown RBP17.71■□□□□ 0.43
TNIP1-220ENST00000610535 CNTN3Q9P232 1028 aa17.71■□□□□ 0.43
TNIP1-220ENST00000610535 ZNF212Q9UDV6 495 aa17.71■□□□□ 0.43
TNIP1-220ENST00000610535 SPDYE2BA6NHP3 402 aa17.71■□□□□ 0.42
TNIP1-220ENST00000610535 CALB1P05937 261 aa17.71■□□□□ 0.42
TNIP1-220ENST00000610535 SPDYE6P0CI01 402 aa17.71■□□□□ 0.42
TNIP1-220ENST00000610535 KDSRQ06136 332 aa17.71■□□□□ 0.42
TNIP1-220ENST00000610535 SPDYE2Q495Y8 402 aa17.71■□□□□ 0.42
TNIP1-220ENST00000610535 ARHGEF16Q5VV41 709 aa17.71■□□□□ 0.42
TNIP1-220ENST00000610535 GPAT2Q6NUI2 795 aa17.71■□□□□ 0.42
TNIP1-220ENST00000610535 PRPF39Q86UA1 669 aaKnown RBP17.71■□□□□ 0.42
TNIP1-220ENST00000610535 KIAA0319LQ8IZA0 1049 aa17.71■□□□□ 0.42
TNIP1-220ENST00000610535 RBM15BQ8NDT2 890 aaKnown RBP17.71■□□□□ 0.42
TNIP1-220ENST00000610535 FAM151AQ8WW52 585 aa17.71■□□□□ 0.42
TNIP1-220ENST00000610535 TARS2Q9BW92 718 aaKnown RBP17.71■□□□□ 0.42
TNIP1-220ENST00000610535 STRIP2Q9ULQ0 834 aa17.71■□□□□ 0.42
TNIP1-220ENST00000610535 IQANK1A0A1B0GTG1 560 aa17.7■□□□□ 0.42
TNIP1-220ENST00000610535 MAGEA13PA6NCF6 341 aa17.7■□□□□ 0.42
TNIP1-220ENST00000610535 ANKRD33BA6NCL7 494 aa17.7■□□□□ 0.42
TNIP1-220ENST00000610535 KBTBD13C9JR72 458 aa17.7■□□□□ 0.42
TNIP1-220ENST00000610535 INHBAP08476 426 aa17.7■□□□□ 0.42
TNIP1-220ENST00000610535 KITP10721 976 aa17.7■□□□□ 0.42
TNIP1-220ENST00000610535 YWHAGP61981 247 aaKnown RBP eCLIP17.7■□□□□ 0.42
TNIP1-220ENST00000610535 MTERF2Q49AM1 385 aa17.7■□□□□ 0.42
TNIP1-220ENST00000610535 CES4AQ5XG92 561 aa17.7■□□□□ 0.42
TNIP1-220ENST00000610535 EGFL6Q8IUX8 553 aa17.7■□□□□ 0.42
TNIP1-220ENST00000610535 FGD4Q96M96 766 aa17.7■□□□□ 0.42
TNIP1-220ENST00000610535 TRIM4Q9C037 500 aa17.7■□□□□ 0.42
TNIP1-220ENST00000610535 PXMP2Q9NR77 195 aa17.7■□□□□ 0.42
TNIP1-220ENST00000610535 ZNF70Q9UC06 446 aaPredicted RBP17.7■□□□□ 0.42
TNIP1-220ENST00000610535 DGAT1O75907 488 aa17.7■□□□□ 0.42
TNIP1-220ENST00000610535 TBXAS1P24557 533 aaPredicted RBP17.7■□□□□ 0.42
TNIP1-220ENST00000610535 PSMA2P25787 234 aa17.7■□□□□ 0.42
TNIP1-220ENST00000610535 ZNF200P98182 395 aaPredicted RBP17.7■□□□□ 0.42
TNIP1-220ENST00000610535 SLC18A2Q05940 514 aa17.7■□□□□ 0.42
TNIP1-220ENST00000610535 TAF5Q15542 800 aa17.7■□□□□ 0.42
TNIP1-220ENST00000610535 JOSD2Q8TAC2 188 aa17.7■□□□□ 0.42
TNIP1-220ENST00000610535 TFAP2BQ92481 460 aa17.7■□□□□ 0.42
TNIP1-220ENST00000610535 CYP26B1Q9NR63 512 aa17.7■□□□□ 0.42
TNIP1-220ENST00000610535 PPARGC1AQ9UBK2 798 aaKnown RBP17.7■□□□□ 0.42
TNIP1-220ENST00000610535 MARCOQ9UEW3 520 aaPredicted RBP17.7■□□□□ 0.42
TNIP1-220ENST00000610535 PCSK1NQ9UHG2 260 aa17.7■□□□□ 0.42
TNIP1-220ENST00000610535 A0A1B0GVG6 124 aa17.69■□□□□ 0.42
TNIP1-220ENST00000610535 ZNF132P52740 706 aa17.69■□□□□ 0.42
TNIP1-220ENST00000610535 ENPEPQ07075 957 aa17.69■□□□□ 0.42
TNIP1-220ENST00000610535 ZRSR2Q15696 482 aaKnown RBP17.69■□□□□ 0.42
TNIP1-220ENST00000610535 ZNF772Q68DY9 489 aaPredicted RBP17.69■□□□□ 0.42
TNIP1-220ENST00000610535 MCPH1Q8NEM0 835 aa17.69■□□□□ 0.42
TNIP1-220ENST00000610535 CFAP61Q8NHU2 1237 aa17.69■□□□□ 0.42
TNIP1-220ENST00000610535 CCDC110Q8TBZ0 833 aa17.69■□□□□ 0.42
TNIP1-220ENST00000610535 SLC44A1Q8WWI5 657 aa17.69■□□□□ 0.42
TNIP1-220ENST00000610535 SRPK1Q96SB4 655 aaKnown RBP17.69■□□□□ 0.42
TNIP1-220ENST00000610535 TTC1Q99614 292 aa17.69■□□□□ 0.42
TNIP1-220ENST00000610535 SLC9A2Q9UBY0 812 aa17.69■□□□□ 0.42
TNIP1-220ENST00000610535 CCDC195A0A1B0GUA6 201 aa17.69■□□□□ 0.42
TNIP1-220ENST00000610535 WEE2P0C1S8 567 aa17.69■□□□□ 0.42
TNIP1-220ENST00000610535 GCLCP48506 637 aaPredicted RBP17.69■□□□□ 0.42
TNIP1-220ENST00000610535 SLC25A11Q02978 314 aaKnown RBP17.69■□□□□ 0.42
TNIP1-220ENST00000610535 DPYSL3Q14195 570 aa17.69■□□□□ 0.42
TNIP1-220ENST00000610535 ARID3BQ8IVW6 561 aaPredicted RBP17.69■□□□□ 0.42
TNIP1-220ENST00000610535 CCDC60Q8IWA6 550 aaPredicted RBP17.69■□□□□ 0.42
TNIP1-220ENST00000610535 SLC25A41Q8N5S1 370 aa17.69■□□□□ 0.42
TNIP1-220ENST00000610535 EMC1Q8N766 993 aa17.69■□□□□ 0.42
TNIP1-220ENST00000610535 TMEM35BQ8NCS4 154 aa17.69■□□□□ 0.42
TNIP1-220ENST00000610535 FLAD1Q8NFF5 587 aa17.69■□□□□ 0.42
TNIP1-220ENST00000610535 THTPAQ9BU02 230 aa17.69■□□□□ 0.42
TNIP1-220ENST00000610535 MSTO1Q9BUK6 570 aa17.69■□□□□ 0.42
TNIP1-220ENST00000610535 FBXO40Q9UH90 709 aa17.69■□□□□ 0.42
TNIP1-220ENST00000610535 CNTNAP1P78357 1384 aa17.68■□□□□ 0.42
TNIP1-220ENST00000610535 KLHL33A6NCF5 533 aa17.68■□□□□ 0.42
TNIP1-220ENST00000610535 CAPN14A8MX76 684 aa17.68■□□□□ 0.42
TNIP1-220ENST00000610535 CYB561D2O14569 222 aa17.68■□□□□ 0.42
TNIP1-220ENST00000610535 NDC80O14777 642 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms