RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 CHKAP35790 457 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 ARSEP51690 589 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 PLCB3Q01970 1234 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 AUHQ13825 339 aaKnown RBP12.54□□□□□ -0.4
USP6NL-206ENST00000609853 STAT4Q14765 748 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 PDK2Q15119 407 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 KCTD19Q17RG1 926 aaPredicted RBP12.54□□□□□ -0.4
USP6NL-206ENST00000609853 FAM47CQ5HY64 1035 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 TTC19Q6DKK2 380 aaPredicted RBP12.54□□□□□ -0.4
USP6NL-206ENST00000609853 OR6B2Q6IFH4 312 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 MICALCLQ6ZW33 695 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 RIBC1Q8N443 379 aaPredicted RBP12.54□□□□□ -0.4
USP6NL-206ENST00000609853 EMC1Q8N766 993 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 SLC35F5Q8WV83 523 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 TEKT4Q8WW24 435 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 CFAP57Q96MR6 1250 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 PIN4Q9Y237 131 aaKnown RBP12.54□□□□□ -0.4
USP6NL-206ENST00000609853 ATXN2Q99700 1313 aaKnown RBP12.53□□□□□ -0.4
USP6NL-206ENST00000609853 SMIM28A0A1B0GU29 152 aa12.53□□□□□ -0.4
USP6NL-206ENST00000609853 ZNF487B1APH4 448 aa12.53□□□□□ -0.4
USP6NL-206ENST00000609853 E5RJQ4 531 aa12.53□□□□□ -0.4
USP6NL-206ENST00000609853 PRPSAP2O60256 369 aa12.53□□□□□ -0.4
USP6NL-206ENST00000609853 ITGBL1O95965 494 aaPredicted RBP12.53□□□□□ -0.4
USP6NL-206ENST00000609853 AKR1A1P14550 325 aa12.53□□□□□ -0.4
USP6NL-206ENST00000609853 SLC6A3Q01959 620 aa12.53□□□□□ -0.4
USP6NL-206ENST00000609853 FSCN1Q16658 493 aaKnown RBP12.53□□□□□ -0.4
USP6NL-206ENST00000609853 SV2CQ496J9 727 aa12.53□□□□□ -0.4
USP6NL-206ENST00000609853 PPP1R26Q5T8A7 1209 aaPredicted RBP12.53□□□□□ -0.4
USP6NL-206ENST00000609853 FAM183BPQ6ZVS7 135 aa12.53□□□□□ -0.4
USP6NL-206ENST00000609853 DPH6Q7L8W6 267 aa12.53□□□□□ -0.4
USP6NL-206ENST00000609853 LIMS2Q7Z4I7 341 aa12.53□□□□□ -0.4
USP6NL-206ENST00000609853 NLRP14Q86W24 1093 aa12.53□□□□□ -0.4
USP6NL-206ENST00000609853 IFNL1Q8IU54 200 aa12.53□□□□□ -0.4
USP6NL-206ENST00000609853 C7orf31Q8N865 590 aa12.53□□□□□ -0.4
USP6NL-206ENST00000609853 ACTL9Q8TC94 416 aa12.53□□□□□ -0.4
USP6NL-206ENST00000609853 RXFP2Q8WXD0 754 aa12.53□□□□□ -0.4
USP6NL-206ENST00000609853 CCT8L2Q96SF2 557 aa12.53□□□□□ -0.4
USP6NL-206ENST00000609853 RBM15Q96T37 977 aaKnown RBP eCLIP12.53□□□□□ -0.4
USP6NL-206ENST00000609853 MRPL45Q9BRJ2 306 aaKnown RBP12.53□□□□□ -0.4
USP6NL-206ENST00000609853 MAK16Q9BXY0 300 aaKnown RBP12.53□□□□□ -0.4
USP6NL-206ENST00000609853 ADAM7Q9H2U9 754 aa12.53□□□□□ -0.4
USP6NL-206ENST00000609853 NXF3Q9H4D5 531 aaKnown RBP12.53□□□□□ -0.4
USP6NL-206ENST00000609853 ZFYVE28Q9HCC9 887 aa12.53□□□□□ -0.4
USP6NL-206ENST00000609853 NINJ2Q9NZG7 142 aa12.53□□□□□ -0.4
USP6NL-206ENST00000609853 TUBGCP4Q9UGJ1 667 aa12.53□□□□□ -0.4
USP6NL-206ENST00000609853 GJD2Q9UKL4 321 aa12.53□□□□□ -0.4
USP6NL-206ENST00000609853 DCDC2CA8MYV0 355 aa12.52□□□□□ -0.41
USP6NL-206ENST00000609853 KPNA7A9QM74 516 aa12.52□□□□□ -0.41
USP6NL-206ENST00000609853 SGK1O00141 431 aa12.52□□□□□ -0.41
USP6NL-206ENST00000609853 TREHO43280 583 aa12.52□□□□□ -0.41
USP6NL-206ENST00000609853 DUSP11O75319 330 aaKnown RBP12.52□□□□□ -0.41
USP6NL-206ENST00000609853 ACSL3O95573 720 aa12.52□□□□□ -0.41
USP6NL-206ENST00000609853 STIP1P31948 543 aaKnown RBP12.52□□□□□ -0.41
USP6NL-206ENST00000609853 MAGEA4P43358 317 aa12.52□□□□□ -0.41
USP6NL-206ENST00000609853 ACADSBP45954 432 aa12.52□□□□□ -0.41
USP6NL-206ENST00000609853 CCT5P48643 541 aa12.52□□□□□ -0.41
USP6NL-206ENST00000609853 RPL34P49207 117 aaKnown RBP12.52□□□□□ -0.41
USP6NL-206ENST00000609853 VPS41P49754 854 aa12.52□□□□□ -0.41
USP6NL-206ENST00000609853 TAF6P49848 677 aa12.52□□□□□ -0.41
USP6NL-206ENST00000609853 BCAT1P54687 386 aa12.52□□□□□ -0.41
USP6NL-206ENST00000609853 OTUD4Q01804 1114 aaKnown RBP12.52□□□□□ -0.41
USP6NL-206ENST00000609853 GPS1Q13098 491 aa12.52□□□□□ -0.41
USP6NL-206ENST00000609853 KYNUQ16719 465 aa12.52□□□□□ -0.41
USP6NL-206ENST00000609853 SOWAHAQ2M3V2 549 aa12.52□□□□□ -0.41
USP6NL-206ENST00000609853 FOXR1Q6PIV2 292 aa12.52□□□□□ -0.41
USP6NL-206ENST00000609853 OLFML1Q6UWY5 402 aa12.52□□□□□ -0.41
USP6NL-206ENST00000609853 SRLQ86TD4 932 aa12.52□□□□□ -0.41
USP6NL-206ENST00000609853 ACOT1Q86TX2 421 aa12.52□□□□□ -0.41
USP6NL-206ENST00000609853 C12orf29Q8N999 325 aa12.52□□□□□ -0.41
USP6NL-206ENST00000609853 ANKRD52Q8NB46 1076 aa12.52□□□□□ -0.41
USP6NL-206ENST00000609853 OR6B3Q8NGW1 331 aa12.52□□□□□ -0.41
USP6NL-206ENST00000609853 MYCBPAPQ8TBZ2 947 aa12.52□□□□□ -0.41
USP6NL-206ENST00000609853 EPS8L3Q8TE67 593 aaKnown RBP12.52□□□□□ -0.41
USP6NL-206ENST00000609853 FAM118BQ9BPY3 351 aa12.52□□□□□ -0.41
USP6NL-206ENST00000609853 LGALS13Q9UHV8 139 aa12.52□□□□□ -0.41
USP6NL-206ENST00000609853 A0A087WUV0 522 aaPredicted RBP12.51□□□□□ -0.41
USP6NL-206ENST00000609853 A8MXQ7 604 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 E7EVH7 732 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 MCF2LO15068 1137 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 CDH16O75309 829 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 CYP2B6P20813 491 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 SDC4P31431 198 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 GNL1P36915 607 aaPredicted RBP12.51□□□□□ -0.41
USP6NL-206ENST00000609853 PURAQ00577 322 aaKnown RBP12.51□□□□□ -0.41
USP6NL-206ENST00000609853 BST2Q10589 180 aaKnown RBP12.51□□□□□ -0.41
USP6NL-206ENST00000609853 SMTNL2Q2TAL5 461 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 KCNT1Q5JUK3 1230 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 UBXN11Q5T124 520 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 ERMARDQ5T6L9 678 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 RNASEH2BQ5TBB1 312 aaKnown RBP12.51□□□□□ -0.41
USP6NL-206ENST00000609853 CHADLQ6NUI6 762 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 RGMBQ6NW40 437 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 PMF1Q6P1K2 205 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 CENPUQ71F23 418 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 TTC30AQ86WT1 665 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 RFX6Q8HWS3 928 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 TMEM130Q8N3G9 435 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 TOP6BLQ8N6T0 577 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 APPL2Q8NEU8 664 aa12.51□□□□□ -0.41
USP6NL-206ENST00000609853 RSAD2Q8WXG1 361 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms