RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 ZXDBP98169 803 aa14.29□□□□□ -0.12
POLR2J3-219ENST00000608621 AASDHQ4L235 1098 aaPredicted RBP14.29□□□□□ -0.12
POLR2J3-219ENST00000608621 MDH1BQ5I0G3 518 aa14.29□□□□□ -0.12
POLR2J3-219ENST00000608621 PPM1JQ5JR12 505 aa14.29□□□□□ -0.12
POLR2J3-219ENST00000608621 CNNM4Q6P4Q7 775 aa14.29□□□□□ -0.12
POLR2J3-219ENST00000608621 SHC4Q6S5L8 630 aa14.29□□□□□ -0.12
POLR2J3-219ENST00000608621 SYT13Q7L8C5 426 aa14.29□□□□□ -0.12
POLR2J3-219ENST00000608621 HS2ST1Q7LGA3 356 aa14.29□□□□□ -0.12
POLR2J3-219ENST00000608621 NELFCDQ8IXH7 590 aa14.29□□□□□ -0.12
POLR2J3-219ENST00000608621 OR6B3Q8NGW1 331 aa14.29□□□□□ -0.12
POLR2J3-219ENST00000608621 MYCBPAPQ8TBZ2 947 aa14.29□□□□□ -0.12
POLR2J3-219ENST00000608621 ZNF516Q92618 1163 aa14.29□□□□□ -0.12
POLR2J3-219ENST00000608621 CCDC127Q96BQ5 260 aa14.29□□□□□ -0.12
POLR2J3-219ENST00000608621 CEP295NLQ96MC4 621 aa14.29□□□□□ -0.12
POLR2J3-219ENST00000608621 HHIPQ96QV1 700 aa14.29□□□□□ -0.12
POLR2J3-219ENST00000608621 FNBP1Q96RU3 617 aa14.29□□□□□ -0.12
POLR2J3-219ENST00000608621 C7orf25Q9BPX7 421 aa14.29□□□□□ -0.12
POLR2J3-219ENST00000608621 AGPAT3Q9NRZ7 376 aa14.29□□□□□ -0.12
POLR2J3-219ENST00000608621 ARHGAP26Q9UNA1 814 aa14.29□□□□□ -0.12
POLR2J3-219ENST00000608621 NME7Q9Y5B8 376 aa14.29□□□□□ -0.12
POLR2J3-219ENST00000608621 TPRP12270 2363 aaKnown RBP14.29□□□□□ -0.12
POLR2J3-219ENST00000608621 TACC1O75410 805 aa14.28□□□□□ -0.12
POLR2J3-219ENST00000608621 AKAP3O75969 853 aa14.28□□□□□ -0.12
POLR2J3-219ENST00000608621 EPN2O95208 641 aa14.28□□□□□ -0.12
POLR2J3-219ENST00000608621 ADRB1P08588 477 aa14.28□□□□□ -0.12
POLR2J3-219ENST00000608621 FAM163BP0C2L3 166 aa14.28□□□□□ -0.12
POLR2J3-219ENST00000608621 PTPN1P18031 435 aaKnown RBP14.28□□□□□ -0.12
POLR2J3-219ENST00000608621 CASP1P29466 404 aa14.28□□□□□ -0.12
POLR2J3-219ENST00000608621 CYP24A1Q07973 514 aa14.28□□□□□ -0.12
POLR2J3-219ENST00000608621 DMC1Q14565 340 aa14.28□□□□□ -0.12
POLR2J3-219ENST00000608621 PSMD6Q15008 389 aa14.28□□□□□ -0.12
POLR2J3-219ENST00000608621 WDR72Q3MJ13 1102 aa14.28□□□□□ -0.12
POLR2J3-219ENST00000608621 FOXD4L5Q5VV16 416 aaPredicted RBP14.28□□□□□ -0.12
POLR2J3-219ENST00000608621 C12orf50Q8NA57 414 aaPredicted RBP14.28□□□□□ -0.12
POLR2J3-219ENST00000608621 XXYLT1Q8NBI6 393 aa14.28□□□□□ -0.12
POLR2J3-219ENST00000608621 SCFD1Q8WVM8 642 aa14.28□□□□□ -0.12
POLR2J3-219ENST00000608621 FOXD4L4Q8WXT5 416 aaPredicted RBP14.28□□□□□ -0.12
POLR2J3-219ENST00000608621 ZC3H10Q96K80 434 aaKnown RBP14.28□□□□□ -0.12
POLR2J3-219ENST00000608621 C8orf48Q96LL4 319 aa14.28□□□□□ -0.12
POLR2J3-219ENST00000608621 CGRRF1Q99675 332 aa14.28□□□□□ -0.12
POLR2J3-219ENST00000608621 TTLL2Q9BWV7 592 aa14.28□□□□□ -0.12
POLR2J3-219ENST00000608621 RNF38Q9H0F5 515 aa14.28□□□□□ -0.12
POLR2J3-219ENST00000608621 BLZF1Q9H2G9 400 aa14.28□□□□□ -0.12
POLR2J3-219ENST00000608621 EML5Q05BV3 1969 aa14.27□□□□□ -0.12
POLR2J3-219ENST00000608621 ZNF840PA6NDX5 716 aa14.27□□□□□ -0.13
POLR2J3-219ENST00000608621 F8VP50 259 aa14.27□□□□□ -0.13
POLR2J3-219ENST00000608621 LEFTY2O00292 366 aa14.27□□□□□ -0.13
POLR2J3-219ENST00000608621 TRIM66O15016 1216 aa14.27□□□□□ -0.13
POLR2J3-219ENST00000608621 POLR2DO15514 142 aaKnown RBP14.27□□□□□ -0.13
POLR2J3-219ENST00000608621 YEATS4O95619 227 aa14.27□□□□□ -0.13
POLR2J3-219ENST00000608621 NFATC1O95644 943 aa14.27□□□□□ -0.13
POLR2J3-219ENST00000608621 ABL1P00519 1130 aa14.27□□□□□ -0.13
POLR2J3-219ENST00000608621 PFKLP17858 780 aa14.27□□□□□ -0.13
POLR2J3-219ENST00000608621 PDE6CP51160 858 aa14.27□□□□□ -0.13
POLR2J3-219ENST00000608621 SNRPFP62306 86 aaKnown RBP14.27□□□□□ -0.13
POLR2J3-219ENST00000608621 EHHADHQ08426 723 aa14.27□□□□□ -0.13
POLR2J3-219ENST00000608621 TRPC3Q13507 836 aa14.27□□□□□ -0.13
POLR2J3-219ENST00000608621 FOXD4L6Q3SYB3 417 aaPredicted RBP14.27□□□□□ -0.13
POLR2J3-219ENST00000608621 PLK5Q496M5 336 aa14.27□□□□□ -0.13
POLR2J3-219ENST00000608621 IL31Q6EBC2 164 aa14.27□□□□□ -0.13
POLR2J3-219ENST00000608621 FOXD4L3Q6VB84 417 aaPredicted RBP14.27□□□□□ -0.13
POLR2J3-219ENST00000608621 UNC13DQ70J99 1090 aa14.27□□□□□ -0.13
POLR2J3-219ENST00000608621 ADGRG2Q8IZP9 1017 aa14.27□□□□□ -0.13
POLR2J3-219ENST00000608621 BACH2Q9BYV9 841 aa14.27□□□□□ -0.13
POLR2J3-219ENST00000608621 DUSP15Q9H1R2 295 aaPredicted RBP14.27□□□□□ -0.13
POLR2J3-219ENST00000608621 DPEP3Q9H4B8 488 aa14.27□□□□□ -0.13
POLR2J3-219ENST00000608621 SMOC1Q9H4F8 434 aa14.27□□□□□ -0.13
POLR2J3-219ENST00000608621 SLC39A2Q9NP94 309 aa14.27□□□□□ -0.13
POLR2J3-219ENST00000608621 RXFP3Q9NSD7 469 aa14.27□□□□□ -0.13
POLR2J3-219ENST00000608621 EHD2Q9NZN4 543 aa14.27□□□□□ -0.13
POLR2J3-219ENST00000608621 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.26□□□□□ -0.13
POLR2J3-219ENST00000608621 ANTXRLA6NF34 631 aa14.26□□□□□ -0.13
POLR2J3-219ENST00000608621 A8MXQ7 604 aa14.26□□□□□ -0.13
POLR2J3-219ENST00000608621 K7EQS6 105 aa14.26□□□□□ -0.13
POLR2J3-219ENST00000608621 CLDN5O00501 218 aa14.26□□□□□ -0.13
POLR2J3-219ENST00000608621 DCLK1O15075 740 aa14.26□□□□□ -0.13
POLR2J3-219ENST00000608621 APBB3O95704 486 aa14.26□□□□□ -0.13
POLR2J3-219ENST00000608621 OPRD1P41143 372 aa14.26□□□□□ -0.13
POLR2J3-219ENST00000608621 AFMP43652 599 aa14.26□□□□□ -0.13
POLR2J3-219ENST00000608621 PPP3CCP48454 512 aa14.26□□□□□ -0.13
POLR2J3-219ENST00000608621 DGKEP52429 567 aa14.26□□□□□ -0.13
POLR2J3-219ENST00000608621 CACNA2D1P54289 1103 aa14.26□□□□□ -0.13
POLR2J3-219ENST00000608621 MYL6P60660 151 aa14.26□□□□□ -0.13
POLR2J3-219ENST00000608621 TNNC1P63316 161 aa14.26□□□□□ -0.13
POLR2J3-219ENST00000608621 NOP14P78316 857 aaKnown RBP14.26□□□□□ -0.13
POLR2J3-219ENST00000608621 SLC7A9P82251 487 aa14.26□□□□□ -0.13
POLR2J3-219ENST00000608621 TAF10Q12962 218 aa14.26□□□□□ -0.13
POLR2J3-219ENST00000608621 PLA2G2CQ5R387 149 aa14.26□□□□□ -0.13
POLR2J3-219ENST00000608621 TDRD10Q5VZ19 366 aaKnown RBP14.26□□□□□ -0.13
POLR2J3-219ENST00000608621 ACDQ96AP0 544 aa14.26□□□□□ -0.13
POLR2J3-219ENST00000608621 B3GNT5Q9BYG0 378 aa14.26□□□□□ -0.13
POLR2J3-219ENST00000608621 GZF1Q9H116 711 aaPredicted RBP14.26□□□□□ -0.13
POLR2J3-219ENST00000608621 TMEM30AQ9NV96 361 aa14.26□□□□□ -0.13
POLR2J3-219ENST00000608621 NXF1Q9UBU9 619 aaKnown RBP14.26□□□□□ -0.13
POLR2J3-219ENST00000608621 EBF1Q9UH73 591 aa14.26□□□□□ -0.13
POLR2J3-219ENST00000608621 PCDHGA5Q9Y5G8 931 aa14.26□□□□□ -0.13
POLR2J3-219ENST00000608621 PTPRDP23468 1912 aa14.25□□□□□ -0.13
POLR2J3-219ENST00000608621 UBE4BO95155 1302 aa14.25□□□□□ -0.13
POLR2J3-219ENST00000608621 PVALEFA0A1B0GWK0 134 aa14.25□□□□□ -0.13
POLR2J3-219ENST00000608621 TM4SF5O14894 197 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms