RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 PTCD2Q8WV60 388 aaKnown RBP13.11□□□□□ -0.31
CTCFL-218ENST00000608440 ZSCAN10Q96SZ4 725 aaPredicted RBP13.11□□□□□ -0.31
CTCFL-218ENST00000608440 NUDT12Q9BQG2 462 aa13.11□□□□□ -0.31
CTCFL-218ENST00000608440 VPS37BQ9H9H4 285 aa13.11□□□□□ -0.31
CTCFL-218ENST00000608440 BLOC1S4Q9NUP1 217 aa13.11□□□□□ -0.31
CTCFL-218ENST00000608440 SNX9Q9Y5X1 595 aa13.11□□□□□ -0.31
CTCFL-218ENST00000608440 CHD4Q14839 1912 aa13.11□□□□□ -0.31
CTCFL-218ENST00000608440 CAPN14A8MX76 684 aa13.11□□□□□ -0.31
CTCFL-218ENST00000608440 E5RJQ4 531 aa13.11□□□□□ -0.31
CTCFL-218ENST00000608440 PSMD12O00232 456 aaPredicted RBP13.11□□□□□ -0.31
CTCFL-218ENST00000608440 SIN3BO75182 1162 aa13.11□□□□□ -0.31
CTCFL-218ENST00000608440 BAIAP3O94812 1187 aa13.11□□□□□ -0.31
CTCFL-218ENST00000608440 MAGEA4P43358 317 aa13.11□□□□□ -0.31
CTCFL-218ENST00000608440 RCAN1P53805 252 aa13.11□□□□□ -0.31
CTCFL-218ENST00000608440 MRPS9P82933 396 aaKnown RBP13.11□□□□□ -0.31
CTCFL-218ENST00000608440 UBAP2LQ14157 1087 aaKnown RBP13.11□□□□□ -0.31
CTCFL-218ENST00000608440 SF3B3Q15393 1217 aaKnown RBP13.11□□□□□ -0.31
CTCFL-218ENST00000608440 SIX1Q15475 284 aaPredicted RBP13.11□□□□□ -0.31
CTCFL-218ENST00000608440 FAM182AQ5T1J6 154 aa13.11□□□□□ -0.31
CTCFL-218ENST00000608440 RNF19BQ6ZMZ0 732 aa13.11□□□□□ -0.31
CTCFL-218ENST00000608440 MCF2L2Q86YR7 1114 aa13.11□□□□□ -0.31
CTCFL-218ENST00000608440 CHPT1Q8WUD6 406 aa13.11□□□□□ -0.31
CTCFL-218ENST00000608440 LARP4BQ92615 738 aaKnown RBP13.11□□□□□ -0.31
CTCFL-218ENST00000608440 CELF1Q92879 486 aaKnown RBP13.11□□□□□ -0.31
CTCFL-218ENST00000608440 TTC17Q96AE7 1141 aa13.11□□□□□ -0.31
CTCFL-218ENST00000608440 BTBD6Q96KE9 485 aa13.11□□□□□ -0.31
CTCFL-218ENST00000608440 CLK4Q9HAZ1 481 aaKnown RBP13.11□□□□□ -0.31
CTCFL-218ENST00000608440 SAYSD1Q9NPB0 183 aa13.11□□□□□ -0.31
CTCFL-218ENST00000608440 CNGB3Q9NQW8 809 aa13.11□□□□□ -0.31
CTCFL-218ENST00000608440 MARCOQ9UEW3 520 aaPredicted RBP13.11□□□□□ -0.31
CTCFL-218ENST00000608440 GNEQ9Y223 722 aaKnown RBP13.11□□□□□ -0.31
CTCFL-218ENST00000608440 BGNP21810 368 aa13.1□□□□□ -0.31
CTCFL-218ENST00000608440 IVDP26440 423 aa13.1□□□□□ -0.31
CTCFL-218ENST00000608440 ARHGAP4P98171 946 aa13.1□□□□□ -0.31
CTCFL-218ENST00000608440 RGS21Q2M5E4 152 aa13.1□□□□□ -0.31
CTCFL-218ENST00000608440 IL23RQ5VWK5 629 aa13.1□□□□□ -0.31
CTCFL-218ENST00000608440 TTC39CQ8N584 583 aa13.1□□□□□ -0.31
CTCFL-218ENST00000608440 CTRCQ99895 268 aa13.1□□□□□ -0.31
CTCFL-218ENST00000608440 KLHL3Q9UH77 587 aa13.1□□□□□ -0.31
CTCFL-218ENST00000608440 MYH11P35749 1972 aa13.1□□□□□ -0.31
CTCFL-218ENST00000608440 NCANO14594 1321 aa13.1□□□□□ -0.31
CTCFL-218ENST00000608440 PVALEFA0A1B0GWK0 134 aa13.1□□□□□ -0.31
CTCFL-218ENST00000608440 PSMD11O00231 422 aa13.1□□□□□ -0.31
CTCFL-218ENST00000608440 OR52Z1P0C646 297 aa13.1□□□□□ -0.31
CTCFL-218ENST00000608440 CCDC130P13994 396 aa13.1□□□□□ -0.31
CTCFL-218ENST00000608440 PHKA1P46020 1223 aa13.1□□□□□ -0.31
CTCFL-218ENST00000608440 CDKL1Q00532 357 aa13.1□□□□□ -0.31
CTCFL-218ENST00000608440 CHRNDQ07001 517 aa13.1□□□□□ -0.31
CTCFL-218ENST00000608440 PFKFB3Q16875 520 aaPredicted RBP13.1□□□□□ -0.31
CTCFL-218ENST00000608440 TRIM16LQ309B1 348 aa13.1□□□□□ -0.31
CTCFL-218ENST00000608440 SLC10A5Q5PT55 438 aa13.1□□□□□ -0.31
CTCFL-218ENST00000608440 DPY19L2P1Q6NXN4 242 aa13.1□□□□□ -0.31
CTCFL-218ENST00000608440 KYAT3Q6YP21 454 aaKnown RBP13.1□□□□□ -0.31
CTCFL-218ENST00000608440 ZNF276Q8N554 614 aa13.1□□□□□ -0.31
CTCFL-218ENST00000608440 CAPSLQ8WWF8 208 aa13.1□□□□□ -0.31
CTCFL-218ENST00000608440 NUF2Q9BZD4 464 aa13.1□□□□□ -0.31
CTCFL-218ENST00000608440 KLC2Q9H0B6 622 aa13.1□□□□□ -0.31
CTCFL-218ENST00000608440 CAAP1Q9H8G2 361 aa13.1□□□□□ -0.31
CTCFL-218ENST00000608440 TYW1Q9NV66 732 aaKnown RBP13.1□□□□□ -0.31
CTCFL-218ENST00000608440 GPSM3Q9Y4H4 160 aa13.1□□□□□ -0.31
CTCFL-218ENST00000608440 POTECB2RU33 542 aa13.09□□□□□ -0.31
CTCFL-218ENST00000608440 NMT2O60551 498 aa13.09□□□□□ -0.31
CTCFL-218ENST00000608440 UBL4AP11441 157 aa13.09□□□□□ -0.31
CTCFL-218ENST00000608440 PRKACBP22694 351 aa13.09□□□□□ -0.31
CTCFL-218ENST00000608440 CDH15P55291 814 aa13.09□□□□□ -0.31
CTCFL-218ENST00000608440 RPL26P61254 145 aaKnown RBP13.09□□□□□ -0.31
CTCFL-218ENST00000608440 GRB10Q13322 594 aa13.09□□□□□ -0.31
CTCFL-218ENST00000608440 PRKG1Q13976 671 aa13.09□□□□□ -0.31
CTCFL-218ENST00000608440 FASTKD3Q14CZ7 662 aaKnown RBP13.09□□□□□ -0.31
CTCFL-218ENST00000608440 CYP1B1Q16678 543 aa13.09□□□□□ -0.31
CTCFL-218ENST00000608440 OGFRL1Q5TC84 451 aaPredicted RBP13.09□□□□□ -0.31
CTCFL-218ENST00000608440 PLEKHA7Q6IQ23 1121 aa13.09□□□□□ -0.31
CTCFL-218ENST00000608440 UTS2BQ765I0 119 aa13.09□□□□□ -0.31
CTCFL-218ENST00000608440 HPS6Q86YV9 775 aa13.09□□□□□ -0.31
CTCFL-218ENST00000608440 C12orf50Q8NA57 414 aaPredicted RBP13.09□□□□□ -0.31
CTCFL-218ENST00000608440 GOLM1Q8NBJ4 401 aa13.09□□□□□ -0.31
CTCFL-218ENST00000608440 TTC13Q8NBP0 860 aa13.09□□□□□ -0.31
CTCFL-218ENST00000608440 C12orf43Q96C57 262 aaKnown RBP13.09□□□□□ -0.31
CTCFL-218ENST00000608440 RILPQ96NA2 401 aa13.09□□□□□ -0.31
CTCFL-218ENST00000608440 IGSF9Q9P2J2 1179 aa13.09□□□□□ -0.31
CTCFL-218ENST00000608440 SEL1LQ9UBV2 794 aa13.09□□□□□ -0.31
CTCFL-218ENST00000608440 HERC5Q9UII4 1024 aaKnown RBP13.09□□□□□ -0.31
CTCFL-218ENST00000608440 PACSIN3Q9UKS6 424 aa13.09□□□□□ -0.31
CTCFL-218ENST00000608440 LOC105371267A0A1B0GV96 52 aa13.09□□□□□ -0.31
CTCFL-218ENST00000608440 KLHL41O60662 606 aa13.09□□□□□ -0.31
CTCFL-218ENST00000608440 ZNF23P17027 643 aa13.09□□□□□ -0.31
CTCFL-218ENST00000608440 CALML3P27482 149 aa13.09□□□□□ -0.31
CTCFL-218ENST00000608440 STAT1P42224 750 aa13.09□□□□□ -0.31
CTCFL-218ENST00000608440 NDST2P52849 883 aa13.09□□□□□ -0.31
CTCFL-218ENST00000608440 NKX2-5P52952 324 aaPredicted RBP13.09□□□□□ -0.31
CTCFL-218ENST00000608440 NDUFA5Q16718 116 aa13.09□□□□□ -0.31
CTCFL-218ENST00000608440 TMTC4Q5T4D3 741 aa13.09□□□□□ -0.31
CTCFL-218ENST00000608440 OR7G1Q8NGA0 311 aa13.09□□□□□ -0.31
CTCFL-218ENST00000608440 GABPB2Q8TAK5 448 aaPredicted RBP13.09□□□□□ -0.31
CTCFL-218ENST00000608440 SDR42E1Q8WUS8 393 aa13.09□□□□□ -0.31
CTCFL-218ENST00000608440 WNK4Q96J92 1243 aa13.09□□□□□ -0.31
CTCFL-218ENST00000608440 HERC2P3Q9BVR0 1158 aa13.09□□□□□ -0.31
CTCFL-218ENST00000608440 RNF41Q9H4P4 317 aaPredicted RBP13.09□□□□□ -0.31
CTCFL-218ENST00000608440 PCDHA6Q9UN73 950 aa13.09□□□□□ -0.31
CTCFL-218ENST00000608440 SOX13Q9UN79 622 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms