RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 E5RJQ4 531 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 CD247P20963 164 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 RPL10P27635 214 aaKnown RBP12.41□□□□□ -0.42
CTCFL-217ENST00000608425 ADAM17P78536 824 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 PCSK7Q16549 785 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 MAP3K21Q5TCX8 1036 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 RHBDF2Q6PJF5 856 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 DHRS4L2Q6PKH6 230 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 RNF19BQ6ZMZ0 732 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 DCUN1D1Q96GG9 259 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 OXNAD1Q96HP4 312 aaPredicted RBP12.41□□□□□ -0.42
CTCFL-217ENST00000608425 MAK16Q9BXY0 300 aaKnown RBP12.41□□□□□ -0.42
CTCFL-217ENST00000608425 TRIM55Q9BYV6 548 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 CLK4Q9HAZ1 481 aaKnown RBP12.41□□□□□ -0.42
CTCFL-217ENST00000608425 BARHL2Q9NY43 387 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 DAGLAQ9Y4D2 1042 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 COL4A3BPQ9Y5P4 624 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 AP4B1Q9Y6B7 739 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 MYO3BQ8WXR4 1341 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 MCF2LO15068 1137 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 PFDN6O15212 129 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 DDX5P17844 614 aaKnown RBP12.41□□□□□ -0.42
CTCFL-217ENST00000608425 CDK9P50750 372 aaKnown RBP12.41□□□□□ -0.42
CTCFL-217ENST00000608425 NR1H2P55055 460 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 KRT17Q04695 432 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 TMTC4Q5T4D3 741 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 NIPAL1Q6NVV3 410 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 GRAMD2AQ8IUY3 354 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 ATG4AQ8WYN0 398 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 C7orf25Q9BPX7 421 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 GID8Q9NWU2 228 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 SEL1LQ9UBV2 794 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 DNAJB4Q9UDY4 337 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 PACSIN3Q9UKS6 424 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 SNX9Q9Y5X1 595 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 TMEM114B3SHH9 223 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 CYTH3O43739 400 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 DDHD2O94830 711 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 PRKACBP22694 351 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 CTNNA2P26232 953 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 MXI1P50539 228 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 CDKL1Q00532 357 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 PPP2R5EQ16537 467 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 ZNF276Q8N554 614 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 GOLM1Q8NBJ4 401 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 GPKOWQ92917 476 aaPredicted RBP eCLIP12.41□□□□□ -0.42
CTCFL-217ENST00000608425 FAM118BQ9BPY3 351 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 HERC2P3Q9BVR0 1158 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 GPAMQ9HCL2 828 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 SLC17A7Q9P2U7 560 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 KIAA1257Q9ULG3 409 aa12.41□□□□□ -0.42
CTCFL-217ENST00000608425 ZNF646O15015 1829 aaPredicted RBP12.4□□□□□ -0.42
CTCFL-217ENST00000608425 ZNF536O15090 1300 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 PSMD11O00231 422 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 UGT1A9O60656 530 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 POLR2MP0CAP2 368 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 DLATP10515 647 aaKnown RBP12.4□□□□□ -0.42
CTCFL-217ENST00000608425 UCHL3P15374 230 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 UGT1A6P19224 532 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 UGT1A1P22309 533 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 UGT1A4P22310 534 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 UGT1A3P35503 534 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 UGT1A5P35504 534 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 SLC16A2P36021 539 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 CDH15P55291 814 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 CTRCQ99895 268 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 SHCBP1LQ9BZQ2 653 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 KLHL25Q9H0H3 589 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 CDH19Q9H159 772 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 UGT1A7Q9HAW7 530 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 UGT1A10Q9HAW8 530 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 UGT1A8Q9HAW9 530 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 PARVBQ9HBI1 364 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 NR2E3Q9Y5X4 410 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 ALG6Q9Y672 507 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 TNS1Q9HBL0 1735 aaKnown RBP12.4□□□□□ -0.42
CTCFL-217ENST00000608425 GSTTP1A0A1W2PQM5 241 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 SLC26A4O43511 780 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 TNFAIP8O95379 198 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 CLK3P49761 638 aaKnown RBP12.4□□□□□ -0.42
CTCFL-217ENST00000608425 GTF2IP78347 998 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 IFITM2Q01629 132 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 SLC35G1Q2M3R5 365 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 HSF5Q4G112 596 aaPredicted RBP12.4□□□□□ -0.42
CTCFL-217ENST00000608425 TCHHL1Q5QJ38 904 aaPredicted RBP12.4□□□□□ -0.42
CTCFL-217ENST00000608425 C10orf76Q5T2E6 689 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 BORAQ6PGQ7 559 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 MIER3Q7Z3K6 550 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 TRIML2Q8N7C3 387 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 EME1Q96AY2 570 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 TUBB6Q9BUF5 446 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 THAP2Q9H0W7 228 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 PPARGC1AQ9UBK2 798 aaKnown RBP12.4□□□□□ -0.42
CTCFL-217ENST00000608425 KLHL3Q9UH77 587 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 NENFQ9UMX5 172 aa12.4□□□□□ -0.42
CTCFL-217ENST00000608425 EXOC1LA0A1B0GW35 172 aa12.39□□□□□ -0.43
CTCFL-217ENST00000608425 CCDC162PA2VCL2 907 aa12.39□□□□□ -0.43
CTCFL-217ENST00000608425 LAD1O00515 517 aa12.39□□□□□ -0.43
CTCFL-217ENST00000608425 DLDP09622 509 aaKnown RBP12.39□□□□□ -0.43
CTCFL-217ENST00000608425 AP3M2P53677 418 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms