RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 ZBED8Q8IZ13 594 aa16.69■□□□□ 0.26
CTSA-214ENST00000606788 PRMT1Q99873 361 aaKnown RBP16.69■□□□□ 0.26
CTSA-214ENST00000606788 PAIP2Q9BPZ3 127 aaKnown RBP16.69■□□□□ 0.26
CTSA-214ENST00000606788 NFKBIZQ9BYH8 718 aa16.69■□□□□ 0.26
CTSA-214ENST00000606788 ZNF518BQ9C0D4 1074 aa16.69■□□□□ 0.26
CTSA-214ENST00000606788 NEU2Q9Y3R4 380 aa16.69■□□□□ 0.26
CTSA-214ENST00000606788 TNPO2O14787 897 aaKnown RBP16.68■□□□□ 0.26
CTSA-214ENST00000606788 PFKMP08237 780 aa16.68■□□□□ 0.26
CTSA-214ENST00000606788 VDRP11473 427 aa16.68■□□□□ 0.26
CTSA-214ENST00000606788 KDELR1P24390 212 aa16.68■□□□□ 0.26
CTSA-214ENST00000606788 BASP1P80723 227 aaKnown RBP16.68■□□□□ 0.26
CTSA-214ENST00000606788 IFT88Q13099 833 aa16.68■□□□□ 0.26
CTSA-214ENST00000606788 SNX17Q15036 470 aa16.68■□□□□ 0.26
CTSA-214ENST00000606788 CA9Q16790 459 aa16.68■□□□□ 0.26
CTSA-214ENST00000606788 HADHQ16836 314 aaKnown RBP16.68■□□□□ 0.26
CTSA-214ENST00000606788 NOTUMQ6P988 496 aa16.68■□□□□ 0.26
CTSA-214ENST00000606788 RHBDF2Q6PJF5 856 aa16.68■□□□□ 0.26
CTSA-214ENST00000606788 SRRM1Q8IYB3 904 aaKnown RBP16.68■□□□□ 0.26
CTSA-214ENST00000606788 ADAM7Q9H2U9 754 aa16.68■□□□□ 0.26
CTSA-214ENST00000606788 GGT7Q9UJ14 662 aa16.68■□□□□ 0.26
CTSA-214ENST00000606788 FAM169AQ9Y6X4 670 aa16.68■□□□□ 0.26
CTSA-214ENST00000606788 TCRBV7S3A2A0A539 114 aa16.68■□□□□ 0.26
CTSA-214ENST00000606788 PAEPP09466 180 aa16.68■□□□□ 0.26
CTSA-214ENST00000606788 NUDT17P0C025 328 aa16.68■□□□□ 0.26
CTSA-214ENST00000606788 DARSP14868 501 aaKnown RBP16.68■□□□□ 0.26
CTSA-214ENST00000606788 PSEN2P49810 448 aa16.68■□□□□ 0.26
CTSA-214ENST00000606788 TMED2Q15363 201 aa16.68■□□□□ 0.26
CTSA-214ENST00000606788 SOWAHAQ2M3V2 549 aa16.68■□□□□ 0.26
CTSA-214ENST00000606788 ARFGAP2Q8N6H7 521 aa16.68■□□□□ 0.26
CTSA-214ENST00000606788 ARHGEF2Q92974 986 aaKnown RBP16.68■□□□□ 0.26
CTSA-214ENST00000606788 ITGA11Q9UKX5 1188 aa16.68■□□□□ 0.26
CTSA-214ENST00000606788 KLRC2P26717 231 aa16.68■□□□□ 0.26
CTSA-214ENST00000606788 GRM5P41594 1212 aa16.68■□□□□ 0.26
CTSA-214ENST00000606788 EIF3BP55884 814 aaKnown RBP16.68■□□□□ 0.26
CTSA-214ENST00000606788 TRIM32Q13049 653 aa16.68■□□□□ 0.26
CTSA-214ENST00000606788 CNGA2Q16280 664 aa16.68■□□□□ 0.26
CTSA-214ENST00000606788 AGBL2Q5U5Z8 902 aa16.68■□□□□ 0.26
CTSA-214ENST00000606788 RSAD2Q8WXG1 361 aa16.68■□□□□ 0.26
CTSA-214ENST00000606788 AP5M1Q9H0R1 490 aa16.68■□□□□ 0.26
CTSA-214ENST00000606788 TMPRSS4Q9NRS4 437 aa16.68■□□□□ 0.26
CTSA-214ENST00000606788 A6NJR5 290 aa16.67■□□□□ 0.26
CTSA-214ENST00000606788 TTC4O95801 387 aa16.67■□□□□ 0.26
CTSA-214ENST00000606788 ZNF865P0CJ78 1059 aaPredicted RBP16.67■□□□□ 0.26
CTSA-214ENST00000606788 CDH5P33151 784 aaPredicted RBP16.67■□□□□ 0.26
CTSA-214ENST00000606788 GNASQ5JWF2 1037 aa16.67■□□□□ 0.26
CTSA-214ENST00000606788 CPLX4Q7Z7G2 160 aa16.67■□□□□ 0.26
CTSA-214ENST00000606788 GTF3C2Q8WUA4 911 aaPredicted RBP16.67■□□□□ 0.26
CTSA-214ENST00000606788 DYDC1Q8WWB3 177 aa16.67■□□□□ 0.26
CTSA-214ENST00000606788 THOC1Q96FV9 657 aaKnown RBP16.67■□□□□ 0.26
CTSA-214ENST00000606788 KIF9Q9HAQ2 790 aa16.67■□□□□ 0.26
CTSA-214ENST00000606788 FEZ2Q9UHY8 353 aaPredicted RBP16.67■□□□□ 0.26
CTSA-214ENST00000606788 GNEQ9Y223 722 aaKnown RBP16.67■□□□□ 0.26
CTSA-214ENST00000606788 SMIM28A0A1B0GU29 152 aa16.67■□□□□ 0.26
CTSA-214ENST00000606788 C3orf70A6NLC5 250 aaPredicted RBP16.67■□□□□ 0.26
CTSA-214ENST00000606788 SPAG7O75391 227 aa16.67■□□□□ 0.26
CTSA-214ENST00000606788 GABBR2O75899 941 aa16.67■□□□□ 0.26
CTSA-214ENST00000606788 F2P00734 622 aa16.67■□□□□ 0.26
CTSA-214ENST00000606788 VCPP55072 806 aaKnown RBP16.67■□□□□ 0.26
CTSA-214ENST00000606788 PDIA2Q13087 525 aaKnown RBP16.67■□□□□ 0.26
CTSA-214ENST00000606788 ZKSCAN8Q15776 578 aaPredicted RBP16.67■□□□□ 0.26
CTSA-214ENST00000606788 EXOC3L1Q86VI1 746 aa16.67■□□□□ 0.26
CTSA-214ENST00000606788 SPATA18Q8TC71 538 aa16.67■□□□□ 0.26
CTSA-214ENST00000606788 EMID1Q96A84 441 aaPredicted RBP16.67■□□□□ 0.26
CTSA-214ENST00000606788 FAM149B1Q96BN6 582 aa16.67■□□□□ 0.26
CTSA-214ENST00000606788 SNX27Q96L92 541 aa16.67■□□□□ 0.26
CTSA-214ENST00000606788 LHX5Q9H2C1 402 aa16.67■□□□□ 0.26
CTSA-214ENST00000606788 SLC15A5A6NIM6 579 aa16.66■□□□□ 0.26
CTSA-214ENST00000606788 I3L4J1 428 aa16.66■□□□□ 0.26
CTSA-214ENST00000606788 RPS6KA5O75582 802 aa16.66■□□□□ 0.26
CTSA-214ENST00000606788 VIMP08670 466 aaKnown RBP16.66■□□□□ 0.26
CTSA-214ENST00000606788 CTGFP29279 349 aa16.66■□□□□ 0.26
CTSA-214ENST00000606788 MAN1A1P33908 653 aa16.66■□□□□ 0.26
CTSA-214ENST00000606788 MAGEA4P43358 317 aa16.66■□□□□ 0.26
CTSA-214ENST00000606788 KRT81Q14533 505 aa16.66■□□□□ 0.26
CTSA-214ENST00000606788 EFTUD2Q15029 972 aaKnown RBP eCLIP16.66■□□□□ 0.266e-11■■■■■ 49.2
CTSA-214ENST00000606788 SLC2A14Q8TDB8 520 aa16.66■□□□□ 0.26
CTSA-214ENST00000606788 FAM172AQ8WUF8 416 aa16.66■□□□□ 0.26
CTSA-214ENST00000606788 TLCD1Q96CP7 247 aa16.66■□□□□ 0.26
CTSA-214ENST00000606788 RUNDC3BQ96NL0 473 aa16.66■□□□□ 0.26
CTSA-214ENST00000606788 MAK16Q9BXY0 300 aaKnown RBP16.66■□□□□ 0.26
CTSA-214ENST00000606788 INTS9Q9NV88 658 aaKnown RBP16.66■□□□□ 0.26
CTSA-214ENST00000606788 HESX1Q9UBX0 185 aa16.66■□□□□ 0.26
CTSA-214ENST00000606788 C2CD2Q9Y426 696 aa16.66■□□□□ 0.26
CTSA-214ENST00000606788 RBP3P10745 1247 aa16.66■□□□□ 0.26
CTSA-214ENST00000606788 GPD1P21695 349 aa16.66■□□□□ 0.26
CTSA-214ENST00000606788 EIF3EP60228 445 aaKnown RBP16.66■□□□□ 0.26
CTSA-214ENST00000606788 C9orf57Q5W0N0 161 aa16.66■□□□□ 0.26
CTSA-214ENST00000606788 ALLCQ8N6M5 410 aa16.66■□□□□ 0.26
CTSA-214ENST00000606788 BEST2Q8NFU1 509 aa16.66■□□□□ 0.26
CTSA-214ENST00000606788 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.66■□□□□ 0.26
CTSA-214ENST00000606788 HASPINQ8TF76 798 aa16.66■□□□□ 0.26
CTSA-214ENST00000606788 NRCAMQ92823 1304 aa16.66■□□□□ 0.26
CTSA-214ENST00000606788 GMNCA6NCL1 334 aa16.66■□□□□ 0.26
CTSA-214ENST00000606788 H7C0C1 242 aa16.66■□□□□ 0.26
CTSA-214ENST00000606788 PRPSAP2O60256 369 aa16.66■□□□□ 0.26
CTSA-214ENST00000606788 ATP5OP48047 213 aa16.66■□□□□ 0.26
CTSA-214ENST00000606788 CTCFP49711 727 aaPredicted RBP16.66■□□□□ 0.26
CTSA-214ENST00000606788 ZNF467Q7Z7K2 595 aaPredicted RBP16.66■□□□□ 0.26
CTSA-214ENST00000606788 ZNF410Q86VK4 478 aa16.66■□□□□ 0.26
CTSA-214ENST00000606788 WNT8BQ93098 351 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms