RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 E9PBE3 544 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 K7ESM1 405 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 IPO5O00410 1097 aaKnown RBP4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 PLSCR1O15162 318 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 DAPK3O43293 454 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 NCK2O43639 380 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 CCDC22O60826 627 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 DNAJA2O60884 412 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 CBFA2T3O75081 653 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 ZNF189O75820 626 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 ASMTLO95671 621 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 GGPS1O95749 300 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 GNA14O95837 355 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 SHBGP04278 402 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 CYP1A1P04798 512 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 IGKV5-2P06315 115 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 PDHA1P08559 390 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 VAV1P15498 845 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 GM2AP17900 193 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 CYP11B2P19099 503 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 KCNA3P22001 575 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 S100A1P23297 94 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 HOXD12P35452 270 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 FLT3P36888 993 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 IL15P40933 162 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 LIMS1P48059 325 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 RAP1GDS1P52306 607 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 POLGP54098 1239 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 ADARP55265 1226 aaKnown RBP4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 PTENP60484 403 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 ZC3H6P61129 1189 aaKnown RBP4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 ZNF200P98182 395 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 PLOD1Q02809 727 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 RCN2Q14257 317 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 KRT72Q14CN4 511 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 TCEAL1Q15170 157 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 TARBP2Q15633 366 aaKnown RBP4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 MAN2A1Q16706 1144 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 WDR72Q3MJ13 1102 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 CCDC153Q494R4 210 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 SLC44A4Q53GD3 710 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 HSP90AA5PQ58FG0 334 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 DENND2CQ68D51 928 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 OVOS1Q6IE37 1185 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 NEPROQ6NW34 567 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 AAGABQ6PD74 315 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 DHRS4L2Q6PKH6 230 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 B3GNT6Q6ZMB0 384 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 PPP1R21Q6ZMI0 780 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 ARHGEF18Q6ZSZ5 1173 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 CHST3Q7LGC8 479 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 GGNQ86UU5 652 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 ECHDC2Q86YB7 292 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 C2CD5Q86YS7 1000 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 KIAA0825Q8IV33 1275 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 IGDCC3Q8IVU1 814 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 SCUBE1Q8IWY4 988 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 SLC15A3Q8IY34 581 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 ST13P4Q8IZP2 240 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 SYCE1Q8N0S2 351 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 NUP93Q8N1F7 819 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 BBS5Q8N3I7 341 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 LRRC57Q8N9N7 239 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 FBXO27Q8NI29 283 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 PPP1R14CQ8TAE6 165 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 DQX1Q8TE96 717 aaKnown RBP4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 UCMAQ8WVF2 138 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 CLMNQ96JQ2 1002 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 FAM81BQ96LP2 452 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 FMO2Q99518 471 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 ZNF184Q99676 751 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 C7orf25Q9BPX7 421 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 DDX23Q9BUQ8 820 aaKnown RBP4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 PHF20Q9BVI0 1012 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 PRDM14Q9GZV8 571 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 DHX36Q9H2U1 1008 aaKnown RBP4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 CNNM2Q9H8M5 875 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 LY9Q9HBG7 655 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 EPB41L4AQ9HCS5 686 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 METTL5Q9NRN9 209 aaKnown RBP4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 GFOD1Q9NXC2 390 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 VPS54Q9P1Q0 977 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 KIAA1522Q9P206 1035 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 CEP72Q9P209 647 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 ABCF2Q9UG63 623 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 SAP30BPQ9UHR5 308 aaKnown RBP4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 LGALS13Q9UHV8 139 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 CROTQ9UKG9 612 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 NENFQ9UMX5 172 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 STK38LQ9Y2H1 464 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 THRAP3Q9Y2W1 955 aaKnown RBP4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 FADS3Q9Y5Q0 445 aa4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 COL22A1Q8NFW1 1626 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P50-201ENST00000605814 ATRNO75882 1429 aa4.3□□□□□ -1.72
HMGB1P50-201ENST00000605814 C10orf71Q711Q0 1435 aa4.3□□□□□ -1.72
HMGB1P50-201ENST00000605814 SIPA1L3O60292 1781 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P50-201ENST00000605814 FRMPD4Q14CM0 1322 aa4.3□□□□□ -1.72
HMGB1P50-201ENST00000605814 ADAMTS7Q9UKP4 1686 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms