RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 NT5C1AQ9BXI3 368 aa15.31■□□□□ 0.04
TUBE1-208ENST00000604743 FOXQ1Q9C009 403 aa15.31■□□□□ 0.04
TUBE1-208ENST00000604743 NUP62CLQ9H1M0 184 aa15.31■□□□□ 0.04
TUBE1-208ENST00000604743 KRT82Q9NSB4 513 aa15.31■□□□□ 0.04
TUBE1-208ENST00000604743 DDX6P26196 483 aaKnown RBP eCLIP15.3■□□□□ 0.04
TUBE1-208ENST00000604743 FMO5P49326 533 aa15.3■□□□□ 0.04
TUBE1-208ENST00000604743 INCA1Q0VD86 236 aa15.3■□□□□ 0.04
TUBE1-208ENST00000604743 UBXN2BQ14CS0 331 aa15.3■□□□□ 0.04
TUBE1-208ENST00000604743 MON1AQ86VX9 555 aa15.3■□□□□ 0.04
TUBE1-208ENST00000604743 FUKQ8N0W3 1084 aa15.3■□□□□ 0.04
TUBE1-208ENST00000604743 PRSS33Q8NF86 280 aa15.3■□□□□ 0.04
TUBE1-208ENST00000604743 TTC8Q8TAM2 541 aa15.3■□□□□ 0.04
TUBE1-208ENST00000604743 BPIFB1Q8TDL5 484 aa15.3■□□□□ 0.04
TUBE1-208ENST00000604743 CSGALNACT1Q8TDX6 532 aa15.3■□□□□ 0.04
TUBE1-208ENST00000604743 WHAMMQ8TF30 809 aa15.3■□□□□ 0.04
TUBE1-208ENST00000604743 SMARCD1Q96GM5 515 aa15.3■□□□□ 0.04
TUBE1-208ENST00000604743 ZFYVE19Q96K21 471 aa15.3■□□□□ 0.04
TUBE1-208ENST00000604743 CYP2S1Q96SQ9 504 aa15.3■□□□□ 0.04
TUBE1-208ENST00000604743 ARID3AQ99856 593 aa15.3■□□□□ 0.04
TUBE1-208ENST00000604743 TRPM5Q9NZQ8 1165 aa15.3■□□□□ 0.04
TUBE1-208ENST00000604743 CCL26Q9Y258 94 aa15.3■□□□□ 0.04
TUBE1-208ENST00000604743 MYO16Q9Y6X6 1858 aa15.3■□□□□ 0.04
TUBE1-208ENST00000604743 HELZP42694 1942 aaKnown RBP15.29■□□□□ 0.04
TUBE1-208ENST00000604743 C2orf78A6NCI8 922 aa15.29■□□□□ 0.04
TUBE1-208ENST00000604743 CILPO75339 1184 aa15.29■□□□□ 0.04
TUBE1-208ENST00000604743 DCNP07585 359 aaKnown RBP15.29■□□□□ 0.04
TUBE1-208ENST00000604743 MAP3K7CLP57077 242 aa15.29■□□□□ 0.04
TUBE1-208ENST00000604743 STARD6P59095 220 aa15.29■□□□□ 0.04
TUBE1-208ENST00000604743 PRKCQQ04759 706 aa15.29■□□□□ 0.04
TUBE1-208ENST00000604743 TAF10Q12962 218 aa15.29■□□□□ 0.04
TUBE1-208ENST00000604743 PHLDB3Q6NSJ2 640 aa15.29■□□□□ 0.04
TUBE1-208ENST00000604743 NUP93Q8N1F7 819 aa15.29■□□□□ 0.04
TUBE1-208ENST00000604743 CELF5Q8N6W0 485 aaKnown RBP15.29■□□□□ 0.04
TUBE1-208ENST00000604743 ARL14EPQ8N8R7 260 aaPredicted RBP15.29■□□□□ 0.04
TUBE1-208ENST00000604743 DNASE1L2Q92874 299 aa15.29■□□□□ 0.04
TUBE1-208ENST00000604743 USP13Q92995 863 aaPredicted RBP15.29■□□□□ 0.04
TUBE1-208ENST00000604743 JAKMIP2Q96AA8 810 aa15.29■□□□□ 0.04
TUBE1-208ENST00000604743 CYFIP2Q96F07 1278 aa15.29■□□□□ 0.04
TUBE1-208ENST00000604743 CEP295NLQ96MC4 621 aa15.29■□□□□ 0.04
TUBE1-208ENST00000604743 HEXIM2Q96MH2 286 aaKnown RBP15.29■□□□□ 0.04
TUBE1-208ENST00000604743 SLC22A12Q96S37 553 aa15.29■□□□□ 0.04
TUBE1-208ENST00000604743 DNAI2Q9GZS0 605 aa15.29■□□□□ 0.04
TUBE1-208ENST00000604743 DMAP1Q9NPF5 467 aaPredicted RBP15.29■□□□□ 0.04
TUBE1-208ENST00000604743 CISHQ9NSE2 258 aa15.29■□□□□ 0.04
TUBE1-208ENST00000604743 TDP1Q9NUW8 608 aa15.29■□□□□ 0.04
TUBE1-208ENST00000604743 EHD2Q9NZN4 543 aa15.29■□□□□ 0.04
TUBE1-208ENST00000604743 ZMYM5Q9UJ78 669 aa15.29■□□□□ 0.04
TUBE1-208ENST00000604743 COQ4Q9Y3A0 265 aa15.29■□□□□ 0.04
TUBE1-208ENST00000604743 SIT1Q9Y3P8 196 aa15.29■□□□□ 0.04
TUBE1-208ENST00000604743 F5P12259 2224 aa15.29■□□□□ 0.04
TUBE1-208ENST00000604743 TRAV19A0A0A6YYK7 116 aa15.28■□□□□ 0.04
TUBE1-208ENST00000604743 KANSL1LA0AUZ9 987 aa15.28■□□□□ 0.04
TUBE1-208ENST00000604743 GOLGA6L22H0YM25 854 aa15.28■□□□□ 0.04
TUBE1-208ENST00000604743 CHADO15335 359 aa15.28■□□□□ 0.04
TUBE1-208ENST00000604743 BEST1O76090 585 aa15.28■□□□□ 0.04
TUBE1-208ENST00000604743 FGFR1OPO95684 399 aaKnown RBP15.28■□□□□ 0.04
TUBE1-208ENST00000604743 GNA14O95837 355 aa15.28■□□□□ 0.04
TUBE1-208ENST00000604743 CKMP06732 381 aa15.28■□□□□ 0.04
TUBE1-208ENST00000604743 USP17L7P0C7H9 530 aa15.28■□□□□ 0.04
TUBE1-208ENST00000604743 CCDC192P0DO97 292 aa15.28■□□□□ 0.04
TUBE1-208ENST00000604743 YWHAQP27348 245 aa15.28■□□□□ 0.04
TUBE1-208ENST00000604743 WEE1P30291 646 aa15.28■□□□□ 0.04
TUBE1-208ENST00000604743 FCHO2Q0JRZ9 810 aa15.28■□□□□ 0.04
TUBE1-208ENST00000604743 TPD52L1Q16890 204 aaPredicted RBP15.28■□□□□ 0.04
TUBE1-208ENST00000604743 FOXR2Q6PJQ5 311 aa15.28■□□□□ 0.04
TUBE1-208ENST00000604743 SCAMP5Q8TAC9 235 aa15.28■□□□□ 0.04
TUBE1-208ENST00000604743 FBXO32Q969P5 355 aa15.28■□□□□ 0.04
TUBE1-208ENST00000604743 SLITRK1Q96PX8 696 aa15.28■□□□□ 0.04
TUBE1-208ENST00000604743 SMOQ99835 787 aa15.28■□□□□ 0.04
TUBE1-208ENST00000604743 TTLL2Q9BWV7 592 aa15.28■□□□□ 0.04
TUBE1-208ENST00000604743 KCNH6Q9H252 994 aa15.28■□□□□ 0.04
TUBE1-208ENST00000604743 THG1LQ9NWX6 298 aaKnown RBP15.28■□□□□ 0.04
TUBE1-208ENST00000604743 OBP2AQ9NY56 170 aa15.28■□□□□ 0.04
TUBE1-208ENST00000604743 RWDD2AQ9UIY3 292 aa15.28■□□□□ 0.04
TUBE1-208ENST00000604743 MTF2Q9Y483 593 aaPredicted RBP15.28■□□□□ 0.04
TUBE1-208ENST00000604743 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.28■□□□□ 0.04
TUBE1-208ENST00000604743 COL4A2P08572 1712 aa15.28■□□□□ 0.04
TUBE1-208ENST00000604743 FAM170BA6NMN3 283 aa15.27■□□□□ 0.04
TUBE1-208ENST00000604743 RTN3O95197 1032 aaPredicted RBP15.27■□□□□ 0.04
TUBE1-208ENST00000604743 FAM200BP0CF97 657 aa15.27■□□□□ 0.04
TUBE1-208ENST00000604743 HDCP19113 662 aa15.27■□□□□ 0.04
TUBE1-208ENST00000604743 KPNA1P52294 538 aaPredicted RBP15.27■□□□□ 0.04
TUBE1-208ENST00000604743 SLC5A3P53794 718 aa15.27■□□□□ 0.04
TUBE1-208ENST00000604743 CETN1Q12798 172 aa15.27■□□□□ 0.04
TUBE1-208ENST00000604743 KCNH2Q12809 1159 aa15.27■□□□□ 0.04
TUBE1-208ENST00000604743 CUL2Q13617 745 aa15.27■□□□□ 0.04
TUBE1-208ENST00000604743 ARHGAP29Q52LW3 1261 aa15.27■□□□□ 0.04
TUBE1-208ENST00000604743 PPP1R26Q5T8A7 1209 aaPredicted RBP15.27■□□□□ 0.04
TUBE1-208ENST00000604743 ZNF852Q6ZMS4 543 aa15.27■□□□□ 0.04
TUBE1-208ENST00000604743 MLKLQ8NB16 471 aa15.27■□□□□ 0.04
TUBE1-208ENST00000604743 ZMIZ2Q8NF64 920 aa15.27■□□□□ 0.04
TUBE1-208ENST00000604743 PJA1Q8NG27 643 aa15.27■□□□□ 0.04
TUBE1-208ENST00000604743 FAM122AQ96E09 287 aa15.27■□□□□ 0.04
TUBE1-208ENST00000604743 TMEM176AQ96HP8 235 aa15.27■□□□□ 0.04
TUBE1-208ENST00000604743 HNRNPABQ99729 332 aaKnown RBP15.27■□□□□ 0.04
TUBE1-208ENST00000604743 PRRX2Q99811 253 aa15.27■□□□□ 0.04
TUBE1-208ENST00000604743 CHORDC1Q9UHD1 332 aaPredicted RBP15.27■□□□□ 0.04
TUBE1-208ENST00000604743 NDRG2Q9UN36 371 aaKnown RBP15.27■□□□□ 0.04
TUBE1-208ENST00000604743 PIAS3Q9Y6X2 628 aa15.27■□□□□ 0.04
TUBE1-208ENST00000604743 PATJQ8NI35 1801 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms