RNA–Protein interactions for RNA: ENST00000602223.5

STRN4-223, Transcript of striatin 4, human

TSL 4

Gene STRN4, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRN4-223	ENST00000602223	TNIP3	Q96KP6	325 aa		13.2	□□□□□ -0.3
STRN4-223	ENST00000602223	GTPBP4	Q9BZE4	634 aa	Known RBP	13.2	□□□□□ -0.3
STRN4-223	ENST00000602223	TMEM8A	Q9HCN3	771 aa		13.2	□□□□□ -0.3
STRN4-223	ENST00000602223	SPATA6	Q9NWH7	488 aa	Predicted RBP	13.2	□□□□□ -0.3
STRN4-223	ENST00000602223	THG1L	Q9NWX6	298 aa	Known RBP	13.2	□□□□□ -0.3
STRN4-223	ENST00000602223	GTSE1	Q9NYZ3	720 aa		13.2	□□□□□ -0.3
STRN4-223	ENST00000602223	EHD2	Q9NZN4	543 aa		13.2	□□□□□ -0.3
STRN4-223	ENST00000602223	GCNT4	Q9P109	453 aa		13.2	□□□□□ -0.3
STRN4-223	ENST00000602223	NDRG2	Q9UN36	371 aa	Known RBP	13.2	□□□□□ -0.3
STRN4-223	ENST00000602223	PTPRZ1	P23471	2315 aa	Predicted RBP	13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	ATP8B3	O60423	1300 aa		13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	KIAA1549L	Q6ZVL6	1849 aa		13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	TRAV19	A0A0A6YYK7	116 aa		13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	SPECC1L-ADORA2A	F8WAN1	911 aa		13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	GFRA3	O60609	400 aa		13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	USP17L7	P0C7H9	530 aa		13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	SP9	P0CG40	484 aa		13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	EPB41	P11171	864 aa	Known RBP	13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	PFKL	P17858	780 aa		13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	GTF2H1	P32780	548 aa		13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	CTH	P32929	405 aa		13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	SOX9	P48436	509 aa		13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	KPNA1	P52294	538 aa	Predicted RBP	13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	TNK2	Q07912	1038 aa		13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	PAQR9	Q6ZVX9	377 aa		13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	FRMD5	Q7Z6J6	570 aa		13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	FAM35A	Q86V20	835 aa		13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	UNC93A	Q86WB7	457 aa		13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	RALGPS2	Q86X27	583 aa	Predicted RBP	13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	ADSSL1	Q8N142	457 aa		13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	CRYBG2	Q8N1P7	616 aa		13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	EEF2KMT	Q96G04	330 aa		13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	SLC22A12	Q96S37	553 aa		13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	TSG101	Q99816	390 aa		13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	FAM83C	Q9BQN1	747 aa		13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	IMPG2	Q9BZV3	1241 aa		13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	CHRD	Q9H2X0	955 aa		13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	MMRN2	Q9H8L6	949 aa		13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	APOBEC3G	Q9HC16	384 aa	Known RBP	13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	TRPC7	Q9HCX4	862 aa		13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	GKN1	Q9NS71	199 aa		13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	HMGXB4	Q9UGU5	601 aa		13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	FBXO4	Q9UKT5	387 aa		13.19	□□□□□ -0.3
STRN4-223	ENST00000602223	C2orf78	A6NCI8	922 aa		13.18	□□□□□ -0.3
STRN4-223	ENST00000602223	LAMTOR5	O43504	91 aa		13.18	□□□□□ -0.3
STRN4-223	ENST00000602223	KIN	O60870	393 aa	Known RBP	13.18	□□□□□ -0.3
STRN4-223	ENST00000602223	CKM	P06732	381 aa		13.18	□□□□□ -0.3
STRN4-223	ENST00000602223	CHRNB1	P11230	501 aa		13.18	□□□□□ -0.3
STRN4-223	ENST00000602223	TCF3	P15923	654 aa		13.18	□□□□□ -0.3
STRN4-223	ENST00000602223	PPP3CC	P48454	512 aa		13.18	□□□□□ -0.3
STRN4-223	ENST00000602223	NDST1	P52848	882 aa		13.18	□□□□□ -0.3
STRN4-223	ENST00000602223	PMS1	P54277	932 aa	Known RBP	13.18	□□□□□ -0.3
STRN4-223	ENST00000602223	FKBP3	Q00688	224 aa	Known RBP	13.18	□□□□□ -0.3
STRN4-223	ENST00000602223	LRRC63	Q05C16	580 aa		13.18	□□□□□ -0.3
STRN4-223	ENST00000602223	INCA1	Q0VD86	236 aa		13.18	□□□□□ -0.3
STRN4-223	ENST00000602223	USP4	Q13107	963 aa		13.18	□□□□□ -0.3
STRN4-223	ENST00000602223	ZNF77	Q15935	545 aa		13.18	□□□□□ -0.3
STRN4-223	ENST00000602223	ITPRIPL2	Q3MIP1	535 aa		13.18	□□□□□ -0.3
STRN4-223	ENST00000602223	KRT39	Q6A163	491 aa		13.18	□□□□□ -0.3
STRN4-223	ENST00000602223	ANKRD40	Q6AI12	368 aa		13.18	□□□□□ -0.3
STRN4-223	ENST00000602223	TXNDC11	Q6PKC3	985 aa		13.18	□□□□□ -0.3
STRN4-223	ENST00000602223	ACOT1	Q86TX2	421 aa		13.18	□□□□□ -0.3
STRN4-223	ENST00000602223	FUK	Q8N0W3	1084 aa		13.18	□□□□□ -0.3
STRN4-223	ENST00000602223	NUP93	Q8N1F7	819 aa		13.18	□□□□□ -0.3
STRN4-223	ENST00000602223	ARL14EP	Q8N8R7	260 aa	Predicted RBP	13.18	□□□□□ -0.3
STRN4-223	ENST00000602223	TTC8	Q8TAM2	541 aa		13.18	□□□□□ -0.3
STRN4-223	ENST00000602223	SMARCD1	Q96GM5	515 aa		13.18	□□□□□ -0.3
STRN4-223	ENST00000602223	CYP2S1	Q96SQ9	504 aa		13.18	□□□□□ -0.3
STRN4-223	ENST00000602223	IER2	Q9BTL4	223 aa		13.18	□□□□□ -0.3
STRN4-223	ENST00000602223	MED10	Q9BTT4	135 aa		13.18	□□□□□ -0.3
STRN4-223	ENST00000602223	LMAN1L	Q9HAT1	526 aa		13.18	□□□□□ -0.3
STRN4-223	ENST00000602223	CYP3A43	Q9HB55	503 aa		13.18	□□□□□ -0.3
STRN4-223	ENST00000602223	HPS4	Q9NQG7	708 aa		13.18	□□□□□ -0.3
STRN4-223	ENST00000602223	TRPM5	Q9NZQ8	1165 aa		13.18	□□□□□ -0.3
STRN4-223	ENST00000602223	MAN1B1	Q9UKM7	699 aa		13.18	□□□□□ -0.3
STRN4-223	ENST00000602223	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	13.17	□□□□□ -0.3
STRN4-223	ENST00000602223	TRIM49B	A6NDI0	452 aa		13.17	□□□□□ -0.3
STRN4-223	ENST00000602223	ZNF840P	A6NDX5	716 aa		13.17	□□□□□ -0.3
STRN4-223	ENST00000602223	PRR23A	A6NEV1	266 aa		13.17	□□□□□ -0.3
STRN4-223	ENST00000602223	SLC16A3	O15427	465 aa	Known RBP	13.17	□□□□□ -0.3
STRN4-223	ENST00000602223	GADD45B	O75293	160 aa	Predicted RBP	13.17	□□□□□ -0.3
STRN4-223	ENST00000602223	OLFM2	O95897	454 aa		13.17	□□□□□ -0.3
STRN4-223	ENST00000602223	HDC	P19113	662 aa		13.17	□□□□□ -0.3
STRN4-223	ENST00000602223	MXI1	P50539	228 aa		13.17	□□□□□ -0.3
STRN4-223	ENST00000602223	PDE6C	P51160	858 aa		13.17	□□□□□ -0.3
STRN4-223	ENST00000602223	TAF10	Q12962	218 aa		13.17	□□□□□ -0.3
STRN4-223	ENST00000602223	MTAP	Q13126	283 aa		13.17	□□□□□ -0.3
STRN4-223	ENST00000602223	ORC1	Q13415	861 aa		13.17	□□□□□ -0.3
STRN4-223	ENST00000602223	RUNX3	Q13761	415 aa		13.17	□□□□□ -0.3
STRN4-223	ENST00000602223	MTF1	Q14872	753 aa		13.17	□□□□□ -0.3
STRN4-223	ENST00000602223	ZNF528	Q3MIS6	628 aa		13.17	□□□□□ -0.3
STRN4-223	ENST00000602223	WDR44	Q5JSH3	913 aa		13.17	□□□□□ -0.3
STRN4-223	ENST00000602223	TRIM68	Q6AZZ1	485 aa		13.17	□□□□□ -0.3
STRN4-223	ENST00000602223	ASCL5	Q7RTU5	278 aa		13.17	□□□□□ -0.3
STRN4-223	ENST00000602223	NKD2	Q969F2	451 aa	Predicted RBP	13.17	□□□□□ -0.3
STRN4-223	ENST00000602223	SLITRK1	Q96PX8	696 aa		13.17	□□□□□ -0.3
STRN4-223	ENST00000602223	TWNK	Q96RR1	684 aa		13.17	□□□□□ -0.3
STRN4-223	ENST00000602223	KCNK16	Q96T55	309 aa		13.17	□□□□□ -0.3
STRN4-223	ENST00000602223	NIF3L1	Q9GZT8	377 aa		13.17	□□□□□ -0.3
STRN4-223	ENST00000602223	DMAP1	Q9NPF5	467 aa	Predicted RBP	13.17	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 191.2 ms