RNA–Protein interactions for RNA: ENST00000602174.5

NAPA-222, Transcript of NSF attachment protein alpha, human

TSL 2

Gene NAPA, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NAPA-222	ENST00000602174	LILRB3	O75022	631 aa		11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	UROD	P06132	367 aa		11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	PLEK	P08567	350 aa	Predicted RBP	11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	CD19	P15391	556 aa		11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	CHRNB2	P17787	502 aa		11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	PTPN1	P18031	435 aa	Known RBP	11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	BRD2	P25440	801 aa	Known RBP	11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	CDH5	P33151	784 aa	Predicted RBP	11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	TSPY1	Q01534	308 aa		11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	FMO1	Q01740	532 aa		11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	CREM	Q03060	361 aa		11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	ORC1	Q13415	861 aa		11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	BMS1	Q14692	1282 aa	Known RBP	11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	MAPRE1	Q15691	268 aa	Known RBP	11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	PSMD5	Q16401	504 aa		11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	SGO2	Q562F6	1265 aa		11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	CWF19L1	Q69YN2	538 aa	Known RBP	11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	SLC8B1	Q6J4K2	584 aa		11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	FAM171B	Q6P995	826 aa		11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	TRIM72	Q6ZMU5	477 aa		11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	TAS1R1	Q7RTX1	841 aa		11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	ACOT1	Q86TX2	421 aa		11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	GPIHBP1	Q8IV16	184 aa		11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	CCDC170	Q8IYT3	715 aa		11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	LNX1	Q8TBB1	728 aa	Predicted RBP	11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	MYCBPAP	Q8TBZ2	947 aa		11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	SLC20A1	Q8WUM9	679 aa		11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	ZNF606	Q8WXB4	792 aa		11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	TFAP2B	Q92481	460 aa		11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	KLHL5	Q96PQ7	755 aa		11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	CHP1	Q99653	195 aa		11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	AGPAT1	Q99943	283 aa		11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	ZCWPW1	Q9H0M4	648 aa		11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	KCNF1	Q9H3M0	494 aa		11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	11.69	□□□□□ -0.54
NAPA-222	ENST00000602174	FRYL	O94915	3013 aa		11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	EP300	Q09472	2414 aa	Predicted RBP	11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	ATP8B3	O60423	1300 aa		11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	LCA5L	O95447	670 aa		11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	LSM8	O95777	96 aa	Known RBP	11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	CNP	P09543	421 aa	Known RBP	11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	PDGFRB	P09619	1106 aa		11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	SKIL	P12757	684 aa		11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	NPR3	P17342	541 aa		11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	ACAT1	P24752	427 aa	Known RBP	11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	EIF4A3	P38919	411 aa	Known RBP	11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	CLCN4	P51793	760 aa		11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	PSMC1	P62191	440 aa	Known RBP	11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	SMARCB1	Q12824	385 aa		11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	CNGA2	Q16280	664 aa		11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	CTXN3	Q4LDR2	81 aa		11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	PKDCC	Q504Y2	493 aa		11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	HS1BP3	Q53T59	392 aa		11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	ATAT1	Q5SQI0	421 aa		11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	LCLAT1	Q6UWP7	414 aa		11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	GPR149	Q86SP6	731 aa		11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	VPS36	Q86VN1	386 aa		11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	CEP57	Q86XR8	500 aa		11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	DCP1B	Q8IZD4	617 aa	Known RBP	11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	TDRD5	Q8NAT2	981 aa	Known RBP	11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	SLC30A5	Q8TAD4	765 aa		11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	RIN2	Q8WYP3	895 aa	Predicted RBP	11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	B3GALT6	Q96L58	329 aa		11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	HNRNPAB	Q99729	332 aa	Known RBP	11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	RXFP1	Q9HBX9	757 aa		11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	FNIP2	Q9P278	1114 aa		11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	UST	Q9Y2C2	406 aa		11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	SSX2IP	Q9Y2D8	614 aa		11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	MTCL1	Q9Y4B5	1905 aa	Known RBP	11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	DMXL1	Q9Y485	3027 aa		11.68	□□□□□ -0.54
NAPA-222	ENST00000602174	MYBPHL	A2RUH7	354 aa		11.67	□□□□□ -0.54
NAPA-222	ENST00000602174	PRR23A	A6NEV1	266 aa		11.67	□□□□□ -0.54
NAPA-222	ENST00000602174	SOWAHD	A6NJG2	315 aa		11.67	□□□□□ -0.54
NAPA-222	ENST00000602174	DDX3X	O00571	662 aa	Known RBP eCLIP	11.67	□□□□□ -0.54	6e-15	■■■□□ 18.2
NAPA-222	ENST00000602174	PI15	O43692	258 aa		11.67	□□□□□ -0.54
NAPA-222	ENST00000602174	ATP2C2	O75185	946 aa		11.67	□□□□□ -0.54
NAPA-222	ENST00000602174	CALCA	P01258	141 aa		11.67	□□□□□ -0.54
NAPA-222	ENST00000602174	CYP1A1	P04798	512 aa	Predicted RBP	11.67	□□□□□ -0.54
NAPA-222	ENST00000602174	MME	P08473	750 aa		11.67	□□□□□ -0.54
NAPA-222	ENST00000602174	SETSIP	P0DME0	302 aa		11.67	□□□□□ -0.54
NAPA-222	ENST00000602174	CCDC130	P13994	396 aa		11.67	□□□□□ -0.54
NAPA-222	ENST00000602174	CYLC1	P35663	651 aa	Predicted RBP	11.67	□□□□□ -0.54
NAPA-222	ENST00000602174	NBL1	P41271	181 aa		11.67	□□□□□ -0.54
NAPA-222	ENST00000602174	KIF11	P52732	1056 aa		11.67	□□□□□ -0.54
NAPA-222	ENST00000602174	NUBP1	P53384	320 aa		11.67	□□□□□ -0.54
NAPA-222	ENST00000602174	NOMO3	P69849	1222 aa		11.67	□□□□□ -0.54
NAPA-222	ENST00000602174	SLC18A3	Q16572	532 aa		11.67	□□□□□ -0.54
NAPA-222	ENST00000602174	NFE2	Q16621	373 aa	Predicted RBP	11.67	□□□□□ -0.54
NAPA-222	ENST00000602174	CCDC142	Q17RM4	750 aa		11.67	□□□□□ -0.54
NAPA-222	ENST00000602174	CFAP221	Q4G0U5	840 aa		11.67	□□□□□ -0.54
NAPA-222	ENST00000602174	MDH1B	Q5I0G3	518 aa		11.67	□□□□□ -0.54
NAPA-222	ENST00000602174	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	11.67	□□□□□ -0.54
NAPA-222	ENST00000602174	ASTL	Q6HA08	431 aa	Predicted RBP	11.67	□□□□□ -0.54
NAPA-222	ENST00000602174	PRSS55	Q6UWB4	352 aa	Predicted RBP	11.67	□□□□□ -0.54
NAPA-222	ENST00000602174	RSPO2	Q6UXX9	243 aa	Predicted RBP	11.67	□□□□□ -0.54
NAPA-222	ENST00000602174	RAD9B	Q6WBX8	426 aa		11.67	□□□□□ -0.54
NAPA-222	ENST00000602174	FAM35A	Q86V20	835 aa		11.67	□□□□□ -0.54
NAPA-222	ENST00000602174	GLYCTK	Q8IVS8	523 aa		11.67	□□□□□ -0.54
NAPA-222	ENST00000602174	FUK	Q8N0W3	1084 aa		11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms