RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 OR6B3Q8NGW1 331 aa14.05□□□□□ -0.16
RPS28-204ENST00000602140 RPLP0P6Q8NHW5 317 aa14.05□□□□□ -0.16
RPS28-204ENST00000602140 SCFD1Q8WVM8 642 aa14.05□□□□□ -0.16
RPS28-204ENST00000602140 EZH1Q92800 747 aaPredicted RBP14.05□□□□□ -0.16
RPS28-204ENST00000602140 CEP295NLQ96MC4 621 aa14.05□□□□□ -0.16
RPS28-204ENST00000602140 HHIPQ96QV1 700 aa14.05□□□□□ -0.16
RPS28-204ENST00000602140 CGRRF1Q99675 332 aa14.05□□□□□ -0.16
RPS28-204ENST00000602140 C7orf25Q9BPX7 421 aa14.05□□□□□ -0.16
RPS28-204ENST00000602140 ARRDC1-AS1Q9H2J1 176 aa14.05□□□□□ -0.16
RPS28-204ENST00000602140 LINC00597Q9H2U6 94 aa14.05□□□□□ -0.16
RPS28-204ENST00000602140 SNX25Q9H3E2 840 aa14.05□□□□□ -0.16
RPS28-204ENST00000602140 TRPM5Q9NZQ8 1165 aa14.05□□□□□ -0.16
RPS28-204ENST00000602140 ARHGAP26Q9UNA1 814 aa14.05□□□□□ -0.16
RPS28-204ENST00000602140 NME7Q9Y5B8 376 aa14.05□□□□□ -0.16
RPS28-204ENST00000602140 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.04□□□□□ -0.16
RPS28-204ENST00000602140 F8VP50 259 aa14.04□□□□□ -0.16
RPS28-204ENST00000602140 TRIM66O15016 1216 aa14.04□□□□□ -0.16
RPS28-204ENST00000602140 POLR2DO15514 142 aaKnown RBP14.04□□□□□ -0.16
RPS28-204ENST00000602140 FOXD2O60548 495 aaPredicted RBP14.04□□□□□ -0.16
RPS28-204ENST00000602140 TACC1O75410 805 aa14.04□□□□□ -0.16
RPS28-204ENST00000602140 TCF3P15923 654 aa14.04□□□□□ -0.16
RPS28-204ENST00000602140 RAP1GAPP47736 663 aa14.04□□□□□ -0.16
RPS28-204ENST00000602140 TNNC1P63316 161 aa14.04□□□□□ -0.16
RPS28-204ENST00000602140 ZXDBP98169 803 aa14.04□□□□□ -0.16
RPS28-204ENST00000602140 EHHADHQ08426 723 aa14.04□□□□□ -0.16
RPS28-204ENST00000602140 PSMD2Q13200 908 aa14.04□□□□□ -0.16
RPS28-204ENST00000602140 SF3A2Q15428 464 aaKnown RBP14.04□□□□□ -0.16
RPS28-204ENST00000602140 WDR72Q3MJ13 1102 aa14.04□□□□□ -0.16
RPS28-204ENST00000602140 UNC13DQ70J99 1090 aa14.04□□□□□ -0.16
RPS28-204ENST00000602140 LOXL4Q96JB6 756 aa14.04□□□□□ -0.16
RPS28-204ENST00000602140 TTLL2Q9BWV7 592 aa14.04□□□□□ -0.16
RPS28-204ENST00000602140 BLZF1Q9H2G9 400 aa14.04□□□□□ -0.16
RPS28-204ENST00000602140 UBE4BO95155 1302 aa14.04□□□□□ -0.16
RPS28-204ENST00000602140 ANAPC1Q9H1A4 1944 aa14.03□□□□□ -0.16
RPS28-204ENST00000602140 ZNF840PA6NDX5 716 aa14.03□□□□□ -0.16
RPS28-204ENST00000602140 LEFTY2O00292 366 aa14.03□□□□□ -0.16
RPS28-204ENST00000602140 NFATC1O95644 943 aa14.03□□□□□ -0.16
RPS28-204ENST00000602140 ABL1P00519 1130 aa14.03□□□□□ -0.16
RPS28-204ENST00000602140 PTPN1P18031 435 aaKnown RBP14.03□□□□□ -0.16
RPS28-204ENST00000602140 SNRPFP62306 86 aaKnown RBP14.03□□□□□ -0.16
RPS28-204ENST00000602140 NOP14P78316 857 aaKnown RBP14.03□□□□□ -0.16
RPS28-204ENST00000602140 TRPC3Q13507 836 aa14.03□□□□□ -0.16
RPS28-204ENST00000602140 DMC1Q14565 340 aa14.03□□□□□ -0.16
RPS28-204ENST00000602140 AASDHQ4L235 1098 aaPredicted RBP14.03□□□□□ -0.16
RPS28-204ENST00000602140 PPM1JQ5JR12 505 aa14.03□□□□□ -0.16
RPS28-204ENST00000602140 SYT13Q7L8C5 426 aa14.03□□□□□ -0.16
RPS28-204ENST00000602140 ZNF516Q92618 1163 aa14.03□□□□□ -0.16
RPS28-204ENST00000602140 C8orf48Q96LL4 319 aa14.03□□□□□ -0.16
RPS28-204ENST00000602140 CNTNAP3BQ96NU0 1288 aa14.03□□□□□ -0.16
RPS28-204ENST00000602140 CNTNAP3Q9BZ76 1288 aa14.03□□□□□ -0.16
RPS28-204ENST00000602140 GZF1Q9H116 711 aaPredicted RBP14.03□□□□□ -0.16
RPS28-204ENST00000602140 DPEP3Q9H4B8 488 aa14.03□□□□□ -0.16
RPS28-204ENST00000602140 MAGEF1Q9HAY2 307 aa14.03□□□□□ -0.16
RPS28-204ENST00000602140 SLC39A2Q9NP94 309 aa14.03□□□□□ -0.16
RPS28-204ENST00000602140 EHD2Q9NZN4 543 aa14.03□□□□□ -0.16
RPS28-204ENST00000602140 GREB1Q4ZG55 1949 aa14.03□□□□□ -0.16
RPS28-204ENST00000602140 ATG2BQ96BY7 2078 aa14.03□□□□□ -0.16
RPS28-204ENST00000602140 SPTBN2O15020 2390 aa14.02□□□□□ -0.16
RPS28-204ENST00000602140 RALGAPA1Q6GYQ0 2036 aa14.02□□□□□ -0.16
RPS28-204ENST00000602140 AKAP3O75969 853 aa14.02□□□□□ -0.17
RPS28-204ENST00000602140 EPN2O95208 641 aa14.02□□□□□ -0.17
RPS28-204ENST00000602140 APBB3O95704 486 aa14.02□□□□□ -0.17
RPS28-204ENST00000602140 FAM163BP0C2L3 166 aa14.02□□□□□ -0.17
RPS28-204ENST00000602140 ZNF806P0C7X5 589 aa14.02□□□□□ -0.17
RPS28-204ENST00000602140 PFKLP17858 780 aa14.02□□□□□ -0.17
RPS28-204ENST00000602140 AFMP43652 599 aa14.02□□□□□ -0.17
RPS28-204ENST00000602140 CACNA2D1P54289 1103 aa14.02□□□□□ -0.17
RPS28-204ENST00000602140 MYL6P60660 151 aa14.02□□□□□ -0.17
RPS28-204ENST00000602140 TDRD10Q5VZ19 366 aaKnown RBP14.02□□□□□ -0.17
RPS28-204ENST00000602140 C12orf50Q8NA57 414 aaPredicted RBP14.02□□□□□ -0.17
RPS28-204ENST00000602140 ACDQ96AP0 544 aa14.02□□□□□ -0.17
RPS28-204ENST00000602140 ZC3H10Q96K80 434 aaKnown RBP14.02□□□□□ -0.17
RPS28-204ENST00000602140 ZNF518BQ9C0D4 1074 aa14.02□□□□□ -0.17
RPS28-204ENST00000602140 RNF38Q9H0F5 515 aa14.02□□□□□ -0.17
RPS28-204ENST00000602140 RXFP3Q9NSD7 469 aa14.02□□□□□ -0.17
RPS28-204ENST00000602140 TMEM30AQ9NV96 361 aa14.02□□□□□ -0.17
RPS28-204ENST00000602140 SMPD4Q9NXE4 827 aa14.02□□□□□ -0.17
RPS28-204ENST00000602140 NXF1Q9UBU9 619 aaKnown RBP14.02□□□□□ -0.17
RPS28-204ENST00000602140 PVALEFA0A1B0GWK0 134 aa14.01□□□□□ -0.17
RPS28-204ENST00000602140 A8MXQ7 604 aa14.01□□□□□ -0.17
RPS28-204ENST00000602140 CLDN5O00501 218 aa14.01□□□□□ -0.17
RPS28-204ENST00000602140 EXOC3O60645 756 aa14.01□□□□□ -0.17
RPS28-204ENST00000602140 PHACTR2O75167 634 aa14.01□□□□□ -0.17
RPS28-204ENST00000602140 STAU1O95793 577 aaKnown RBP14.01□□□□□ -0.17
RPS28-204ENST00000602140 ADRB1P08588 477 aa14.01□□□□□ -0.17
RPS28-204ENST00000602140 OPRD1P41143 372 aa14.01□□□□□ -0.17
RPS28-204ENST00000602140 ME1P48163 572 aa14.01□□□□□ -0.17
RPS28-204ENST00000602140 PPP3CCP48454 512 aa14.01□□□□□ -0.17
RPS28-204ENST00000602140 CASP4P49662 377 aa14.01□□□□□ -0.17
RPS28-204ENST00000602140 SLC7A9P82251 487 aa14.01□□□□□ -0.17
RPS28-204ENST00000602140 IFRD2Q12894 506 aaPredicted RBP14.01□□□□□ -0.17
RPS28-204ENST00000602140 TAF10Q12962 218 aa14.01□□□□□ -0.17
RPS28-204ENST00000602140 CUL4BQ13620 913 aa14.01□□□□□ -0.17
RPS28-204ENST00000602140 KNOP1Q1ED39 458 aaKnown RBP14.01□□□□□ -0.17
RPS28-204ENST00000602140 BMT2Q1RMZ1 405 aa14.01□□□□□ -0.17
RPS28-204ENST00000602140 PLK5Q496M5 336 aa14.01□□□□□ -0.17
RPS28-204ENST00000602140 IL31Q6EBC2 164 aa14.01□□□□□ -0.17
RPS28-204ENST00000602140 FILIP1Q7Z7B0 1213 aa14.01□□□□□ -0.17
RPS28-204ENST00000602140 C12orf56Q8IXR9 622 aa14.01□□□□□ -0.17
RPS28-204ENST00000602140 B3GALNT2Q8NCR0 500 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms