RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 STX6O43752 255 aa19.02■□□□□ 0.64
SHKBP1-227ENST00000602011 STAU1O95793 577 aaKnown RBP19.02■□□□□ 0.64
SHKBP1-227ENST00000602011 LMO2P25791 158 aa19.02■□□□□ 0.64
SHKBP1-227ENST00000602011 ATICP31939 592 aa19.02■□□□□ 0.64
SHKBP1-227ENST00000602011 SLC7A9P82251 487 aa19.02■□□□□ 0.64
SHKBP1-227ENST00000602011 DMC1Q14565 340 aa19.02■□□□□ 0.64
SHKBP1-227ENST00000602011 PLK5Q496M5 336 aa19.02■□□□□ 0.64
SHKBP1-227ENST00000602011 HSF5Q4G112 596 aaPredicted RBP19.02■□□□□ 0.64
SHKBP1-227ENST00000602011 USP39Q53GS9 565 aaKnown RBP19.02■□□□□ 0.64
SHKBP1-227ENST00000602011 FAM173BQ6P4H8 233 aa19.02■□□□□ 0.64
SHKBP1-227ENST00000602011 HS2ST1Q7LGA3 356 aa19.02■□□□□ 0.64
SHKBP1-227ENST00000602011 DDX42Q86XP3 938 aaKnown RBP eCLIP19.02■□□□□ 0.64
SHKBP1-227ENST00000602011 PDILTQ8N807 584 aa19.02■□□□□ 0.64
SHKBP1-227ENST00000602011 OR5B17Q8NGF7 314 aa19.02■□□□□ 0.64
SHKBP1-227ENST00000602011 RPLP0P6Q8NHW5 317 aa19.02■□□□□ 0.64
SHKBP1-227ENST00000602011 TCHHQ07283 1943 aa19.02■□□□□ 0.63
SHKBP1-227ENST00000602011 GREB1Q4ZG55 1949 aa19.02■□□□□ 0.63
SHKBP1-227ENST00000602011 UBE4BO95155 1302 aa19.01■□□□□ 0.63
SHKBP1-227ENST00000602011 SPAG17Q6Q759 2223 aa19.01■□□□□ 0.63
SHKBP1-227ENST00000602011 CHD6Q8TD26 2715 aa19.01■□□□□ 0.63
SHKBP1-227ENST00000602011 A0A087X0B3 334 aa19.01■□□□□ 0.63
SHKBP1-227ENST00000602011 TM4SF5O14894 197 aa19.01■□□□□ 0.63
SHKBP1-227ENST00000602011 SPTLC2O15270 562 aa19.01■□□□□ 0.63
SHKBP1-227ENST00000602011 TNNI1P19237 187 aa19.01■□□□□ 0.63
SHKBP1-227ENST00000602011 BDNFP23560 247 aa19.01■□□□□ 0.63
SHKBP1-227ENST00000602011 EIF2DP41214 584 aaKnown RBP19.01■□□□□ 0.63
SHKBP1-227ENST00000602011 CYP27A1Q02318 531 aa19.01■□□□□ 0.63
SHKBP1-227ENST00000602011 SNRNP35Q16560 246 aaKnown RBP19.01■□□□□ 0.63
SHKBP1-227ENST00000602011 TDRD10Q5VZ19 366 aaKnown RBP19.01■□□□□ 0.63
SHKBP1-227ENST00000602011 EPM2AIP1Q7L775 607 aaPredicted RBP19.01■□□□□ 0.63
SHKBP1-227ENST00000602011 CBWD2Q8IUF1 395 aa19.01■□□□□ 0.63
SHKBP1-227ENST00000602011 RIN3Q8TB24 985 aa19.01■□□□□ 0.63
SHKBP1-227ENST00000602011 MYLPFQ96A32 169 aa19.01■□□□□ 0.63
SHKBP1-227ENST00000602011 SLITRK1Q96PX8 696 aa19.01■□□□□ 0.63
SHKBP1-227ENST00000602011 SLC22A12Q96S37 553 aa19.01■□□□□ 0.63
SHKBP1-227ENST00000602011 C7orf25Q9BPX7 421 aa19.01■□□□□ 0.63
SHKBP1-227ENST00000602011 ELOVL4Q9GZR5 314 aa19.01■□□□□ 0.63
SHKBP1-227ENST00000602011 CRTAC1Q9NQ79 661 aa19.01■□□□□ 0.63
SHKBP1-227ENST00000602011 WNT6Q9Y6F9 365 aa19.01■□□□□ 0.63
SHKBP1-227ENST00000602011 CACNA1GO43497 2377 aa19■□□□□ 0.63
SHKBP1-227ENST00000602011 C2orf78A6NCI8 922 aa19■□□□□ 0.63
SHKBP1-227ENST00000602011 ZNF840PA6NDX5 716 aa19■□□□□ 0.63
SHKBP1-227ENST00000602011 CUTAO60888 179 aa19■□□□□ 0.63
SHKBP1-227ENST00000602011 ATP2C2O75185 946 aa19■□□□□ 0.63
SHKBP1-227ENST00000602011 YEATS4O95619 227 aa19■□□□□ 0.63
SHKBP1-227ENST00000602011 PDGFRBP09619 1106 aa19■□□□□ 0.63
SHKBP1-227ENST00000602011 MPLP40238 635 aa19■□□□□ 0.63
SHKBP1-227ENST00000602011 AP3M2P53677 418 aa19■□□□□ 0.63
SHKBP1-227ENST00000602011 TNNC1P63316 161 aa19■□□□□ 0.63
SHKBP1-227ENST00000602011 MRPS21P82921 87 aaKnown RBP19■□□□□ 0.63
SHKBP1-227ENST00000602011 PSMD2Q13200 908 aa19■□□□□ 0.63
SHKBP1-227ENST00000602011 PSMD6Q15008 389 aa19■□□□□ 0.63
SHKBP1-227ENST00000602011 E2F4Q16254 413 aa19■□□□□ 0.63
SHKBP1-227ENST00000602011 PREPLQ4J6C6 727 aaPredicted RBP19■□□□□ 0.63
SHKBP1-227ENST00000602011 TCEAL6Q6IPX3 200 aa19■□□□□ 0.63
SHKBP1-227ENST00000602011 ADGRG2Q8IZP9 1017 aa19■□□□□ 0.63
SHKBP1-227ENST00000602011 XXYLT1Q8NBI6 393 aa19■□□□□ 0.63
SHKBP1-227ENST00000602011 PDZD8Q8NEN9 1154 aa19■□□□□ 0.63
SHKBP1-227ENST00000602011 OVCA2Q8WZ82 227 aa19■□□□□ 0.63
SHKBP1-227ENST00000602011 TCEAL3Q969E4 200 aa19■□□□□ 0.63
SHKBP1-227ENST00000602011 PCED1BQ96HM7 432 aa19■□□□□ 0.63
SHKBP1-227ENST00000602011 FGFBP2Q9BYJ0 223 aa19■□□□□ 0.63
SHKBP1-227ENST00000602011 DUSP15Q9H1R2 295 aaPredicted RBP19■□□□□ 0.63
SHKBP1-227ENST00000602011 LINC00597Q9H2U6 94 aa19■□□□□ 0.63
SHKBP1-227ENST00000602011 TBC1D14Q9P2M4 693 aa19■□□□□ 0.63
SHKBP1-227ENST00000602011 EML5Q05BV3 1969 aa18.99■□□□□ 0.63
SHKBP1-227ENST00000602011 FRYQ5TBA9 3013 aa18.99■□□□□ 0.63
SHKBP1-227ENST00000602011 LEFTY2O00292 366 aa18.99■□□□□ 0.63
SHKBP1-227ENST00000602011 RTN3O95197 1032 aaPredicted RBP18.99■□□□□ 0.63
SHKBP1-227ENST00000602011 PTPN1P18031 435 aaKnown RBP18.99■□□□□ 0.63
SHKBP1-227ENST00000602011 PMLP29590 882 aa18.99■□□□□ 0.63
SHKBP1-227ENST00000602011 ASIC1P78348 528 aa18.99■□□□□ 0.63
SHKBP1-227ENST00000602011 TRPC3Q13507 836 aa18.99■□□□□ 0.63
SHKBP1-227ENST00000602011 FAM26FQ5R3K3 315 aa18.99■□□□□ 0.63
SHKBP1-227ENST00000602011 STPG1Q5TH74 334 aa18.99■□□□□ 0.63
SHKBP1-227ENST00000602011 C12orf56Q8IXR9 622 aa18.99■□□□□ 0.63
SHKBP1-227ENST00000602011 TSTD1Q8NFU3 115 aa18.99■□□□□ 0.63
SHKBP1-227ENST00000602011 OR6B3Q8NGW1 331 aa18.99■□□□□ 0.63
SHKBP1-227ENST00000602011 GOLGA5Q8TBA6 731 aa18.99■□□□□ 0.63
SHKBP1-227ENST00000602011 SYAP1Q96A49 352 aaPredicted RBP18.99■□□□□ 0.63
SHKBP1-227ENST00000602011 OTUB2Q96DC9 234 aa18.99■□□□□ 0.63
SHKBP1-227ENST00000602011 HHIPQ96QV1 700 aa18.99■□□□□ 0.63
SHKBP1-227ENST00000602011 CGRRF1Q99675 332 aa18.99■□□□□ 0.63
SHKBP1-227ENST00000602011 AGPAT3Q9NRZ7 376 aa18.99■□□□□ 0.63
SHKBP1-227ENST00000602011 COMMD8Q9NX08 183 aa18.99■□□□□ 0.63
SHKBP1-227ENST00000602011 ANGPTL2Q9UKU9 493 aa18.99■□□□□ 0.63
SHKBP1-227ENST00000602011 DENND4CQ5VZ89 1909 aa18.99■□□□□ 0.63
SHKBP1-227ENST00000602011 A0A0A0MRY4 1105 aa18.98■□□□□ 0.63
SHKBP1-227ENST00000602011 PVALEFA0A1B0GWK0 134 aa18.98■□□□□ 0.63
SHKBP1-227ENST00000602011 ALDH1A2O94788 518 aa18.98■□□□□ 0.63
SHKBP1-227ENST00000602011 OLFM2O95897 454 aa18.98■□□□□ 0.63
SHKBP1-227ENST00000602011 CST3P01034 146 aaPredicted RBP18.98■□□□□ 0.63
SHKBP1-227ENST00000602011 DLATP10515 647 aaKnown RBP18.98■□□□□ 0.63
SHKBP1-227ENST00000602011 DGKEP52429 567 aa18.98■□□□□ 0.63
SHKBP1-227ENST00000602011 PSMC1P62191 440 aaKnown RBP18.98■□□□□ 0.63
SHKBP1-227ENST00000602011 WDR72Q3MJ13 1102 aa18.98■□□□□ 0.63
SHKBP1-227ENST00000602011 LMBRD2Q68DH5 695 aaPredicted RBP18.98■□□□□ 0.63
SHKBP1-227ENST00000602011 UNC13DQ70J99 1090 aa18.98■□□□□ 0.63
SHKBP1-227ENST00000602011 USP33Q8TEY7 942 aa18.98■□□□□ 0.63
SHKBP1-227ENST00000602011 DUSP9Q99956 384 aaKnown RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms