RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 ABCB6Q9NP58 842 aa17.21■□□□□ 0.35
SSBP4-211ENST00000601614 DDX43Q9NXZ2 648 aaKnown RBP17.21■□□□□ 0.35
SSBP4-211ENST00000601614 H0Y626 953 aa17.2■□□□□ 0.34
SSBP4-211ENST00000601614 LAD1O00515 517 aa17.2■□□□□ 0.34
SSBP4-211ENST00000601614 ALDH1A2O94788 518 aa17.2■□□□□ 0.34
SSBP4-211ENST00000601614 TRIM16O95361 564 aa17.2■□□□□ 0.34
SSBP4-211ENST00000601614 ZNF131P52739 623 aa17.2■□□□□ 0.34
SSBP4-211ENST00000601614 KCNB1Q14721 858 aa17.2■□□□□ 0.34
SSBP4-211ENST00000601614 SV2CQ496J9 727 aa17.2■□□□□ 0.34
SSBP4-211ENST00000601614 FILIP1Q7Z7B0 1213 aa17.2■□□□□ 0.34
SSBP4-211ENST00000601614 HDDC3Q8N4P3 179 aa17.2■□□□□ 0.34
SSBP4-211ENST00000601614 MINDY1Q8N5J2 469 aa17.2■□□□□ 0.34
SSBP4-211ENST00000601614 ACBD6Q9BR61 282 aa17.2■□□□□ 0.34
SSBP4-211ENST00000601614 BCCIPQ9P287 314 aaKnown RBP eCLIP17.2■□□□□ 0.34
SSBP4-211ENST00000601614 ODF2LQ9ULJ1 636 aa17.2■□□□□ 0.34
SSBP4-211ENST00000601614 SLC6A14Q9UN76 642 aa17.2■□□□□ 0.34
SSBP4-211ENST00000601614 TCRBV21S2A2A0A5A6 115 aa17.19■□□□□ 0.34
SSBP4-211ENST00000601614 LEFTY2O00292 366 aa17.19■□□□□ 0.34
SSBP4-211ENST00000601614 DUOXA1Q1HG43 343 aa17.19■□□□□ 0.34
SSBP4-211ENST00000601614 ADALQ6DHV7 355 aa17.19■□□□□ 0.34
SSBP4-211ENST00000601614 SCN4BQ8IWT1 228 aa17.19■□□□□ 0.34
SSBP4-211ENST00000601614 ADGRG2Q8IZP9 1017 aa17.19■□□□□ 0.34
SSBP4-211ENST00000601614 MYCT1Q8N699 235 aa17.19■□□□□ 0.34
SSBP4-211ENST00000601614 COL26A1Q96A83 441 aa17.19■□□□□ 0.34
SSBP4-211ENST00000601614 TRAK2O60296 914 aa17.18■□□□□ 0.34
SSBP4-211ENST00000601614 OPHN1O60890 802 aa17.18■□□□□ 0.34
SSBP4-211ENST00000601614 KAT7O95251 611 aa17.18■□□□□ 0.34
SSBP4-211ENST00000601614 SERPINF2P08697 491 aa17.18■□□□□ 0.34
SSBP4-211ENST00000601614 POLR2BP30876 1174 aaKnown RBP17.18■□□□□ 0.34
SSBP4-211ENST00000601614 ATXN3P54252 364 aaPredicted RBP17.18■□□□□ 0.34
SSBP4-211ENST00000601614 USP46P62068 366 aa17.18■□□□□ 0.34
SSBP4-211ENST00000601614 ATP2C1P98194 919 aaPredicted RBP17.18■□□□□ 0.34
SSBP4-211ENST00000601614 GTF2BQ00403 316 aa17.18■□□□□ 0.34
SSBP4-211ENST00000601614 DHX8Q14562 1220 aaKnown RBP17.18■□□□□ 0.34
SSBP4-211ENST00000601614 DHCR24Q15392 516 aa17.18■□□□□ 0.34
SSBP4-211ENST00000601614 ZNF423Q2M1K9 1284 aa17.18■□□□□ 0.34
SSBP4-211ENST00000601614 CFAP221Q4G0U5 840 aa17.18■□□□□ 0.34
SSBP4-211ENST00000601614 SPDYCQ5MJ68 293 aa17.18■□□□□ 0.34
SSBP4-211ENST00000601614 GPBP1Q86WP2 473 aa17.18■□□□□ 0.34
SSBP4-211ENST00000601614 PNPLA1Q8N8W4 532 aa17.18■□□□□ 0.34
SSBP4-211ENST00000601614 ZSWIM2Q8NEG5 633 aa17.18■□□□□ 0.34
SSBP4-211ENST00000601614 ZNF560Q96MR9 790 aa17.18■□□□□ 0.34
SSBP4-211ENST00000601614 PNKPQ96T60 521 aa17.18■□□□□ 0.34
SSBP4-211ENST00000601614 RNF38Q9H0F5 515 aa17.18■□□□□ 0.34
SSBP4-211ENST00000601614 POLMQ9NP87 494 aaPredicted RBP17.18■□□□□ 0.34
SSBP4-211ENST00000601614 AGO2Q9UKV8 859 aaKnown RBP17.18■□□□□ 0.34
SSBP4-211ENST00000601614 STYXL1Q9Y6J8 313 aa17.18■□□□□ 0.34
SSBP4-211ENST00000601614 ASXL3Q9C0F0 2248 aa17.18■□□□□ 0.34
SSBP4-211ENST00000601614 A0A0A0MRY4 1105 aa17.17■□□□□ 0.34
SSBP4-211ENST00000601614 SH3BP5O60239 455 aa17.17■□□□□ 0.34
SSBP4-211ENST00000601614 ATP2C2O75185 946 aa17.17■□□□□ 0.34
SSBP4-211ENST00000601614 FAM13AO94988 1023 aa17.17■□□□□ 0.34
SSBP4-211ENST00000601614 SEC24BO95487 1268 aa17.17■□□□□ 0.34
SSBP4-211ENST00000601614 ADSSP30520 456 aa17.17■□□□□ 0.34
SSBP4-211ENST00000601614 HOXD12P35452 270 aa17.17■□□□□ 0.34
SSBP4-211ENST00000601614 KDSRQ06136 332 aa17.17■□□□□ 0.34
SSBP4-211ENST00000601614 GFPT1Q06210 699 aaPredicted RBP17.17■□□□□ 0.34
SSBP4-211ENST00000601614 EOGTQ5NDL2 527 aa17.17■□□□□ 0.34
SSBP4-211ENST00000601614 RHBDF2Q6PJF5 856 aa17.17■□□□□ 0.34
SSBP4-211ENST00000601614 SLC41A1Q8IVJ1 513 aa17.17■□□□□ 0.34
SSBP4-211ENST00000601614 PHTF2Q8N3S3 785 aa17.17■□□□□ 0.34
SSBP4-211ENST00000601614 KCTD17Q8N5Z5 321 aa17.17■□□□□ 0.34
SSBP4-211ENST00000601614 C1orf127Q8N9H9 656 aa17.17■□□□□ 0.34
SSBP4-211ENST00000601614 FSIP1Q8NA03 581 aa17.17■□□□□ 0.34
SSBP4-211ENST00000601614 CXorf38Q8TB03 319 aa17.17■□□□□ 0.34
SSBP4-211ENST00000601614 MDM1Q8TC05 714 aa17.17■□□□□ 0.34
SSBP4-211ENST00000601614 SPATA18Q8TC71 538 aa17.17■□□□□ 0.34
SSBP4-211ENST00000601614 LLPHQ9BRT6 129 aaKnown RBP17.17■□□□□ 0.34
SSBP4-211ENST00000601614 PARVGQ9HBI0 331 aa17.17■□□□□ 0.34
SSBP4-211ENST00000601614 BLOC1S4Q9NUP1 217 aa17.17■□□□□ 0.34
SSBP4-211ENST00000601614 DNAAF2Q9NVR5 837 aaKnown RBP17.17■□□□□ 0.34
SSBP4-211ENST00000601614 HCN2Q9UL51 889 aa17.17■□□□□ 0.34
SSBP4-211ENST00000601614 AGAP1Q9UPQ3 857 aa17.17■□□□□ 0.34
SSBP4-211ENST00000601614 URB1O60287 2271 aaKnown RBP17.17■□□□□ 0.34
SSBP4-211ENST00000601614 HELZ2Q9BYK8 2649 aaKnown RBP17.17■□□□□ 0.34
SSBP4-211ENST00000601614 FLNBO75369 2602 aaKnown RBP17.16■□□□□ 0.34
SSBP4-211ENST00000601614 VWA3AA6NCI4 1184 aa17.16■□□□□ 0.34
SSBP4-211ENST00000601614 MYMKA6NI61 221 aa17.16■□□□□ 0.34
SSBP4-211ENST00000601614 GJB3O75712 270 aa17.16■□□□□ 0.34
SSBP4-211ENST00000601614 APODP05090 189 aa17.16■□□□□ 0.34
SSBP4-211ENST00000601614 ITGB3P05106 788 aa17.16■□□□□ 0.34
SSBP4-211ENST00000601614 GABRG2P18507 467 aa17.16■□□□□ 0.34
SSBP4-211ENST00000601614 DPP6P42658 865 aa17.16■□□□□ 0.34
SSBP4-211ENST00000601614 RPL6Q02878 288 aaKnown RBP17.16■□□□□ 0.34
SSBP4-211ENST00000601614 ZNF33AQ06730 810 aa17.16■□□□□ 0.34
SSBP4-211ENST00000601614 HSF5Q4G112 596 aaPredicted RBP17.16■□□□□ 0.34
SSBP4-211ENST00000601614 LMBRD2Q68DH5 695 aaPredicted RBP17.16■□□□□ 0.34
SSBP4-211ENST00000601614 SPATA2LQ8IUW3 424 aaPredicted RBP17.16■□□□□ 0.34
SSBP4-211ENST00000601614 PGBD3Q8N328 593 aa17.16■□□□□ 0.34
SSBP4-211ENST00000601614 ADAMTS14Q8WXS8 1223 aa17.16■□□□□ 0.34
SSBP4-211ENST00000601614 CDK5RAP3Q96JB5 506 aa17.16■□□□□ 0.34
SSBP4-211ENST00000601614 ARHGAP33O14559 1287 aa17.15■□□□□ 0.34
SSBP4-211ENST00000601614 GABRDO14764 452 aa17.15■□□□□ 0.34
SSBP4-211ENST00000601614 AP5Z1O43299 807 aa17.15■□□□□ 0.34
SSBP4-211ENST00000601614 FTH1P19P0C7X4 201 aa17.15■□□□□ 0.34
SSBP4-211ENST00000601614 RDXP35241 583 aaKnown RBP17.15■□□□□ 0.34
SSBP4-211ENST00000601614 EIF2DP41214 584 aaKnown RBP17.15■□□□□ 0.34
SSBP4-211ENST00000601614 PNPLA4P41247 253 aa17.15■□□□□ 0.34
SSBP4-211ENST00000601614 SLC7A9P82251 487 aa17.15■□□□□ 0.34
SSBP4-211ENST00000601614 MYL7Q01449 175 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms