RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 YWHAEP62258 255 aaKnown RBP21.27■■□□□ 1
SSBP4-210ENST00000601444 KCNMA1Q12791 1236 aa21.27■■□□□ 1
SSBP4-210ENST00000601444 IFRD2Q12894 506 aaPredicted RBP21.27■■□□□ 1
SSBP4-210ENST00000601444 TDGQ13569 410 aa21.27■■□□□ 1
SSBP4-210ENST00000601444 CLEC20AQ6ZU45 233 aa21.27■■□□□ 1
SSBP4-210ENST00000601444 DHX40Q8IX18 779 aaKnown RBP21.27■■□□□ 1
SSBP4-210ENST00000601444 SCAMP5Q8TAC9 235 aa21.27■■□□□ 1
SSBP4-210ENST00000601444 ZSCAN18Q8TBC5 510 aaPredicted RBP21.27■■□□□ 1
SSBP4-210ENST00000601444 SLC46A2Q9BY10 475 aa21.27■■□□□ 1
SSBP4-210ENST00000601444 CSNK1G1Q9HCP0 422 aa21.27■■□□□ 1
SSBP4-210ENST00000601444 SIX2Q9NPC8 291 aa21.27■■□□□ 1
SSBP4-210ENST00000601444 AJAP1Q9UKB5 411 aaPredicted RBP21.27■■□□□ 1
SSBP4-210ENST00000601444 TRIOO75962 3097 aa21.27■□□□□ 0.99
SSBP4-210ENST00000601444 TNFRSF10BO14763 440 aa21.26■□□□□ 0.99
SSBP4-210ENST00000601444 FAM200BP0CF97 657 aa21.26■□□□□ 0.99
SSBP4-210ENST00000601444 TRIM21P19474 475 aaKnown RBP21.26■□□□□ 0.99
SSBP4-210ENST00000601444 VIPR2P41587 438 aa21.26■□□□□ 0.99
SSBP4-210ENST00000601444 SKOR2Q2VWA4 1001 aaPredicted RBP21.26■□□□□ 0.99
SSBP4-210ENST00000601444 ZSCAN23Q3MJ62 389 aa21.26■□□□□ 0.99
SSBP4-210ENST00000601444 TXNDC8Q6A555 127 aa21.26■□□□□ 0.99
SSBP4-210ENST00000601444 DPY19L2P1Q6NXN4 242 aa21.26■□□□□ 0.99
SSBP4-210ENST00000601444 NUP93Q8N1F7 819 aa21.26■□□□□ 0.99
SSBP4-210ENST00000601444 EDAQ92838 391 aa21.26■□□□□ 0.99
SSBP4-210ENST00000601444 JAKMIP2Q96AA8 810 aa21.26■□□□□ 0.99
SSBP4-210ENST00000601444 CEP295NLQ96MC4 621 aa21.26■□□□□ 0.99
SSBP4-210ENST00000601444 GCNAQ96QF7 691 aa21.26■□□□□ 0.99
SSBP4-210ENST00000601444 TTLL2Q9BWV7 592 aa21.26■□□□□ 0.99
SSBP4-210ENST00000601444 UXTQ9UBK9 157 aaPredicted RBP21.26■□□□□ 0.99
SSBP4-210ENST00000601444 NCANO14594 1321 aa21.26■□□□□ 0.99
SSBP4-210ENST00000601444 HHLA1C9JL84 531 aa21.25■□□□□ 0.99
SSBP4-210ENST00000601444 CD19P15391 556 aa21.25■□□□□ 0.99
SSBP4-210ENST00000601444 ZNF18P17022 549 aa21.25■□□□□ 0.99
SSBP4-210ENST00000601444 SLC5A3P53794 718 aa21.25■□□□□ 0.99
SSBP4-210ENST00000601444 NFKBIBQ15653 356 aa21.25■□□□□ 0.99
SSBP4-210ENST00000601444 ARHGAP15Q53QZ3 475 aa21.25■□□□□ 0.99
SSBP4-210ENST00000601444 ARHGAP17Q68EM7 881 aa21.25■□□□□ 0.99
SSBP4-210ENST00000601444 MTSS1LQ765P7 747 aa21.25■□□□□ 0.99
SSBP4-210ENST00000601444 GPRIN1Q7Z2K8 1008 aa21.25■□□□□ 0.99
SSBP4-210ENST00000601444 MAB21L3Q8N8X9 362 aa21.25■□□□□ 0.99
SSBP4-210ENST00000601444 TFAP2BQ92481 460 aa21.25■□□□□ 0.99
SSBP4-210ENST00000601444 SMARCD2Q92925 531 aa21.25■□□□□ 0.99
SSBP4-210ENST00000601444 NXPE3Q969Y0 559 aa21.25■□□□□ 0.99
SSBP4-210ENST00000601444 RSPRY1Q96DX4 576 aa21.25■□□□□ 0.99
SSBP4-210ENST00000601444 BPIFA3Q9BQP9 254 aa21.25■□□□□ 0.99
SSBP4-210ENST00000601444 ZSWIM1Q9BR11 485 aa21.25■□□□□ 0.99
SSBP4-210ENST00000601444 GPR88Q9GZN0 384 aa21.25■□□□□ 0.99
SSBP4-210ENST00000601444 DNAI2Q9GZS0 605 aa21.25■□□□□ 0.99
SSBP4-210ENST00000601444 NAT10Q9H0A0 1025 aaKnown RBP21.25■□□□□ 0.99
SSBP4-210ENST00000601444 SMG9Q9H0W8 520 aaKnown RBP21.25■□□□□ 0.99
SSBP4-210ENST00000601444 TASP1Q9H6P5 420 aa21.25■□□□□ 0.99
SSBP4-210ENST00000601444 APEX2Q9UBZ4 518 aa21.25■□□□□ 0.99
SSBP4-210ENST00000601444 FAM86C2PA6NEL3 165 aa21.24■□□□□ 0.99
SSBP4-210ENST00000601444 ATP1A3P13637 1013 aa21.24■□□□□ 0.99
SSBP4-210ENST00000601444 ZNF165P49910 485 aa21.24■□□□□ 0.99
SSBP4-210ENST00000601444 TAF10Q12962 218 aa21.24■□□□□ 0.99
SSBP4-210ENST00000601444 ARHGAP44Q17R89 818 aa21.24■□□□□ 0.99
SSBP4-210ENST00000601444 TTC30AQ86WT1 665 aa21.24■□□□□ 0.99
SSBP4-210ENST00000601444 ARID3BQ8IVW6 561 aaPredicted RBP21.24■□□□□ 0.99
SSBP4-210ENST00000601444 RBBP8NLQ8NC74 664 aaPredicted RBP21.24■□□□□ 0.99
SSBP4-210ENST00000601444 DUSP16Q9BY84 665 aa21.24■□□□□ 0.99
SSBP4-210ENST00000601444 ZFP14Q9HCL3 533 aa21.24■□□□□ 0.99
SSBP4-210ENST00000601444 C11orf16Q9NQ32 467 aa21.24■□□□□ 0.99
SSBP4-210ENST00000601444 MYO10Q9HD67 2058 aa21.24■□□□□ 0.99
SSBP4-210ENST00000601444 C2orf78A6NCI8 922 aa21.23■□□□□ 0.99
SSBP4-210ENST00000601444 ECI2O75521 394 aa21.23■□□□□ 0.99
SSBP4-210ENST00000601444 PRAMEF12O95522 483 aa21.23■□□□□ 0.99
SSBP4-210ENST00000601444 VDRP11473 427 aa21.23■□□□□ 0.99
SSBP4-210ENST00000601444 KRT5P13647 590 aa21.23■□□□□ 0.99
SSBP4-210ENST00000601444 NPR3P17342 541 aa21.23■□□□□ 0.99
SSBP4-210ENST00000601444 ZNF132P52740 706 aa21.23■□□□□ 0.99
SSBP4-210ENST00000601444 COPB1P53618 953 aaKnown RBP21.23■□□□□ 0.99
SSBP4-210ENST00000601444 MFAP3P55082 362 aa21.23■□□□□ 0.99
SSBP4-210ENST00000601444 GOLGA7BQ2TAP0 167 aa21.23■□□□□ 0.99
SSBP4-210ENST00000601444 SGO2Q562F6 1265 aa21.23■□□□□ 0.99
SSBP4-210ENST00000601444 APTXQ7Z2E3 356 aaKnown RBP21.23■□□□□ 0.99
SSBP4-210ENST00000601444 MRPS31Q92665 395 aaKnown RBP21.23■□□□□ 0.99
SSBP4-210ENST00000601444 ELSPBP1Q96BH3 223 aa21.23■□□□□ 0.99
SSBP4-210ENST00000601444 LRRC3BQ96PB8 259 aa21.23■□□□□ 0.99
SSBP4-210ENST00000601444 SLC22A12Q96S37 553 aa21.23■□□□□ 0.99
SSBP4-210ENST00000601444 CYP2S1Q96SQ9 504 aa21.23■□□□□ 0.99
SSBP4-210ENST00000601444 TRPV4Q9HBA0 871 aa21.23■□□□□ 0.99
SSBP4-210ENST00000601444 TRPC7Q9HCX4 862 aa21.23■□□□□ 0.99
SSBP4-210ENST00000601444 IL37Q9NZH6 218 aa21.23■□□□□ 0.99
SSBP4-210ENST00000601444 LIMA1Q9UHB6 759 aaKnown RBP21.23■□□□□ 0.99
SSBP4-210ENST00000601444 CHORDC1Q9UHD1 332 aaPredicted RBP21.23■□□□□ 0.99
SSBP4-210ENST00000601444 TSPAN16Q9UKR8 245 aa21.23■□□□□ 0.99
SSBP4-210ENST00000601444 DUSP12Q9UNI6 340 aa21.23■□□□□ 0.99
SSBP4-210ENST00000601444 CNTN6Q9UQ52 1028 aa21.23■□□□□ 0.99
SSBP4-210ENST00000601444 GREB1Q4ZG55 1949 aa21.22■□□□□ 0.99
SSBP4-210ENST00000601444 TULP2O00295 520 aa21.22■□□□□ 0.99
SSBP4-210ENST00000601444 PAEPP09466 180 aa21.22■□□□□ 0.99
SSBP4-210ENST00000601444 CDK11BP21127 795 aaKnown RBP21.22■□□□□ 0.99
SSBP4-210ENST00000601444 BRD2P25440 801 aaKnown RBP21.22■□□□□ 0.99
SSBP4-210ENST00000601444 YWHAQP27348 245 aa21.22■□□□□ 0.99
SSBP4-210ENST00000601444 PGFP49763 221 aa21.22■□□□□ 0.99
SSBP4-210ENST00000601444 KLK7P49862 253 aa21.22■□□□□ 0.99
SSBP4-210ENST00000601444 GPC5P78333 572 aa21.22■□□□□ 0.99
SSBP4-210ENST00000601444 GRM2Q14416 872 aa21.22■□□□□ 0.99
SSBP4-210ENST00000601444 IQCB1Q15051 598 aa21.22■□□□□ 0.99
SSBP4-210ENST00000601444 VITQ6UXI7 678 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms