RNA–Protein interactions for RNA: ENST00000598969.5

COPE-208, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 5

Gene COPE, Length 1,770 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-208ENST00000598969 ERICH1Q86X53 443 aa22.07■■□□□ 1.12
COPE-208ENST00000598969 SMARCD1Q96GM5 515 aa22.07■■□□□ 1.12
COPE-208ENST00000598969 SAMD11Q96NU1 681 aa22.07■■□□□ 1.12
COPE-208ENST00000598969 PGLYRP2Q96PD5 576 aa22.07■■□□□ 1.12
COPE-208ENST00000598969 NKX2-4Q9H2Z4 354 aa22.07■■□□□ 1.12
COPE-208ENST00000598969 CSNK1G1Q9HCP0 422 aa22.07■■□□□ 1.12
COPE-208ENST00000598969 MRPL17Q9NRX2 175 aaKnown RBP22.07■■□□□ 1.12
COPE-208ENST00000598969 SALL4Q9UJQ4 1053 aa22.07■■□□□ 1.12
COPE-208ENST00000598969 JRKLQ9Y4A0 524 aa22.07■■□□□ 1.12
COPE-208ENST00000598969 WDR27A2RRH5 827 aa22.07■■□□□ 1.12
COPE-208ENST00000598969 BUB1O43683 1085 aa22.07■■□□□ 1.12
COPE-208ENST00000598969 NOP2P46087 812 aaKnown RBP22.07■■□□□ 1.12
COPE-208ENST00000598969 RGS7P49802 495 aa22.07■■□□□ 1.12
COPE-208ENST00000598969 ERVFC1P60507 584 aa22.07■■□□□ 1.12
COPE-208ENST00000598969 ROR1Q01973 937 aa22.07■■□□□ 1.12
COPE-208ENST00000598969 CFAP221Q4G0U5 840 aa22.07■■□□□ 1.12
COPE-208ENST00000598969 RNF19BQ6ZMZ0 732 aa22.07■■□□□ 1.12
COPE-208ENST00000598969 STK32AQ8WU08 396 aa22.07■■□□□ 1.12
COPE-208ENST00000598969 POF1BQ8WVV4 589 aa22.07■■□□□ 1.12
COPE-208ENST00000598969 VCPIP1Q96JH7 1222 aa22.07■■□□□ 1.12
COPE-208ENST00000598969 SLC4A5Q9BY07 1137 aa22.07■■□□□ 1.12
COPE-208ENST00000598969 RXFP1Q9HBX9 757 aa22.07■■□□□ 1.12
COPE-208ENST00000598969 ABI2Q9NYB9 513 aaPredicted RBP22.07■■□□□ 1.12
COPE-208ENST00000598969 CAPN6Q9Y6Q1 641 aa22.07■■□□□ 1.12
COPE-208ENST00000598969 MTMR11A4FU01 709 aa22.06■■□□□ 1.12
COPE-208ENST00000598969 XPO1O14980 1071 aaKnown RBP22.06■■□□□ 1.12
COPE-208ENST00000598969 ATMINO43313 823 aaPredicted RBP22.06■■□□□ 1.12
COPE-208ENST00000598969 CYP2F1P24903 491 aa22.06■■□□□ 1.12
COPE-208ENST00000598969 PLA2G4AP47712 749 aa22.06■■□□□ 1.12
COPE-208ENST00000598969 RPL34P49207 117 aaKnown RBP22.06■■□□□ 1.12
COPE-208ENST00000598969 MAP3K7CLP57077 242 aa22.06■■□□□ 1.12
COPE-208ENST00000598969 GPC5P78333 572 aa22.06■■□□□ 1.12
COPE-208ENST00000598969 RAB30Q15771 203 aa22.06■■□□□ 1.12
COPE-208ENST00000598969 LLGL2Q6P1M3 1020 aa22.06■■□□□ 1.12
COPE-208ENST00000598969 ATAD1Q8NBU5 361 aa22.06■■□□□ 1.12
COPE-208ENST00000598969 ZNF653Q96CK0 615 aa22.06■■□□□ 1.12
COPE-208ENST00000598969 FUBP3Q96I24 572 aaKnown RBP eCLIP22.06■■□□□ 1.12
COPE-208ENST00000598969 KCNK16Q96T55 309 aa22.06■■□□□ 1.12
COPE-208ENST00000598969 C11orf84Q9BUA3 381 aaPredicted RBP22.06■■□□□ 1.12
COPE-208ENST00000598969 MSRAQ9UJ68 235 aa22.06■■□□□ 1.12
COPE-208ENST00000598969 PCDHB5Q9Y5E4 795 aa22.06■■□□□ 1.12
COPE-208ENST00000598969 PDE4DIPQ5VU43 2346 aa22.06■■□□□ 1.12
COPE-208ENST00000598969 ERBB2P04626 1255 aa22.05■■□□□ 1.12
COPE-208ENST00000598969 GABRB2P47870 512 aa22.05■■□□□ 1.12
COPE-208ENST00000598969 UBE3AQ05086 875 aa22.05■■□□□ 1.12
COPE-208ENST00000598969 SMARCB1Q12824 385 aa22.05■■□□□ 1.12
COPE-208ENST00000598969 CHRDL2Q6WN34 429 aa22.05■■□□□ 1.12
COPE-208ENST00000598969 PIGZQ86VD9 579 aa22.05■■□□□ 1.12
COPE-208ENST00000598969 TTC9BQ8N6N2 239 aa22.05■■□□□ 1.12
COPE-208ENST00000598969 CALR3Q96L12 384 aaKnown RBP22.05■■□□□ 1.12
COPE-208ENST00000598969 CRISPLD1Q9H336 500 aa22.05■■□□□ 1.12
COPE-208ENST00000598969 ST7Q9NRC1 585 aa22.05■■□□□ 1.12
COPE-208ENST00000598969 FNIP2Q9P278 1114 aa22.05■■□□□ 1.12
COPE-208ENST00000598969 CHORDC1Q9UHD1 332 aaPredicted RBP22.05■■□□□ 1.12
COPE-208ENST00000598969 NCANO14594 1321 aa22.05■■□□□ 1.12
COPE-208ENST00000598969 CHD9Q3L8U1 2897 aa22.05■■□□□ 1.12
COPE-208ENST00000598969 HHLA1C9JL84 531 aa22.04■■□□□ 1.12
COPE-208ENST00000598969 GRM6O15303 877 aa22.04■■□□□ 1.12
COPE-208ENST00000598969 CYP1A2P05177 515 aa22.04■■□□□ 1.12
COPE-208ENST00000598969 CALB1P05937 261 aa22.04■■□□□ 1.12
COPE-208ENST00000598969 RRM1P23921 792 aa22.04■■□□□ 1.12
COPE-208ENST00000598969 CAMK1Q14012 370 aa22.04■■□□□ 1.12
COPE-208ENST00000598969 CYP4A22Q5TCH4 519 aa22.04■■□□□ 1.12
COPE-208ENST00000598969 TMC7Q7Z402 723 aa22.04■■□□□ 1.12
COPE-208ENST00000598969 PHLDB2Q86SQ0 1253 aa22.04■■□□□ 1.12
COPE-208ENST00000598969 TMEM110Q86TL2 294 aa22.04■■□□□ 1.12
COPE-208ENST00000598969 TRIM11Q96F44 468 aa22.04■■□□□ 1.12
COPE-208ENST00000598969 ABCB6Q9NP58 842 aa22.04■■□□□ 1.12
COPE-208ENST00000598969 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.04■■□□□ 1.125e-7■□□□□ 10.1
COPE-208ENST00000598969 CNOT8Q9UFF9 292 aaKnown RBP22.04■■□□□ 1.12
COPE-208ENST00000598969 PCDHGC5Q9Y5F6 944 aa22.04■■□□□ 1.12
COPE-208ENST00000598969 MRFAP1Q9Y605 127 aa22.04■■□□□ 1.12
COPE-208ENST00000598969 E5RJQ4 531 aa22.04■■□□□ 1.12
COPE-208ENST00000598969 TEX28O15482 410 aa22.04■■□□□ 1.12
COPE-208ENST00000598969 CXCL14O95715 111 aa22.04■■□□□ 1.12
COPE-208ENST00000598969 MYBL1P10243 752 aa22.04■■□□□ 1.12
COPE-208ENST00000598969 SLC8A3P57103 927 aa22.04■■□□□ 1.12
COPE-208ENST00000598969 RFFLQ8WZ73 363 aa22.04■■□□□ 1.12
COPE-208ENST00000598969 C18orf8Q96DM3 657 aa22.04■■□□□ 1.12
COPE-208ENST00000598969 HSFY1Q96LI6 401 aa22.04■■□□□ 1.12
COPE-208ENST00000598969 TCF25Q9BQ70 676 aa22.04■■□□□ 1.12
COPE-208ENST00000598969 UBXN6Q9BZV1 441 aa22.04■■□□□ 1.12
COPE-208ENST00000598969 SSX2IPQ9Y2D8 614 aa22.04■■□□□ 1.12
COPE-208ENST00000598969 TCRBV5S1A1TA0A578 114 aa22.03■■□□□ 1.12
COPE-208ENST00000598969 PIK3R2O00459 728 aa22.03■■□□□ 1.12
COPE-208ENST00000598969 ENC1O14682 589 aa22.03■■□□□ 1.12
COPE-208ENST00000598969 ABLIM3O94929 683 aa22.03■■□□□ 1.12
COPE-208ENST00000598969 SLU7O95391 586 aaKnown RBP22.03■■□□□ 1.12
COPE-208ENST00000598969 MAGEA11P43364 429 aa22.03■■□□□ 1.12
COPE-208ENST00000598969 RAB33AQ14088 237 aa22.03■■□□□ 1.12
COPE-208ENST00000598969 XYLT1Q86Y38 959 aa22.03■■□□□ 1.12
COPE-208ENST00000598969 RHOT2Q8IXI1 618 aa22.03■■□□□ 1.12
COPE-208ENST00000598969 SPPL2BQ8TCT7 592 aa22.03■■□□□ 1.12
COPE-208ENST00000598969 C2orf15Q8WU43 125 aaKnown RBP22.03■■□□□ 1.12
COPE-208ENST00000598969 KCTD13Q8WZ19 329 aa22.03■■□□□ 1.12
COPE-208ENST00000598969 CERS4Q9HA82 394 aa22.03■■□□□ 1.12
COPE-208ENST00000598969 DMAP1Q9NPF5 467 aaPredicted RBP22.03■■□□□ 1.12
COPE-208ENST00000598969 CYLDQ9NQC7 956 aa22.03■■□□□ 1.12
COPE-208ENST00000598969 AVENQ9NQS1 362 aaPredicted RBP22.03■■□□□ 1.12
COPE-208ENST00000598969 TLR9Q9NR96 1032 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms