RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 CLEC4CQ8WTT0 213 aa24.58■■□□□ 1.53
SYMPK-212ENST00000598896 KRT35Q92764 455 aa24.58■■□□□ 1.53
SYMPK-212ENST00000598896 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.58■■□□□ 1.532e-7■■□□□ 14.1
SYMPK-212ENST00000598896 VN1R3Q9BXE9 311 aa24.58■■□□□ 1.53
SYMPK-212ENST00000598896 AP1G2O75843 785 aa24.58■■□□□ 1.52
SYMPK-212ENST00000598896 MARCKSL1P49006 195 aa24.58■■□□□ 1.52
SYMPK-212ENST00000598896 TAP1Q03518 808 aa24.58■■□□□ 1.52
SYMPK-212ENST00000598896 KCNT2Q6UVM3 1135 aa24.58■■□□□ 1.52
SYMPK-212ENST00000598896 SMARCD1Q96GM5 515 aa24.58■■□□□ 1.52
SYMPK-212ENST00000598896 HSFY1Q96LI6 401 aa24.58■■□□□ 1.52
SYMPK-212ENST00000598896 MIS12Q9H081 205 aa24.58■■□□□ 1.52
SYMPK-212ENST00000598896 ZCWPW1Q9H0M4 648 aa24.58■■□□□ 1.52
SYMPK-212ENST00000598896 KIAA1671Q9BY89 1806 aa24.57■■□□□ 1.52
SYMPK-212ENST00000598896 KCNK3O14649 394 aa24.57■■□□□ 1.52
SYMPK-212ENST00000598896 SPOPO43791 374 aa24.57■■□□□ 1.52
SYMPK-212ENST00000598896 LCP1P13796 627 aa24.57■■□□□ 1.52
SYMPK-212ENST00000598896 SLC8A3P57103 927 aa24.57■■□□□ 1.52
SYMPK-212ENST00000598896 ELAVL2Q12926 359 aaKnown RBP24.57■■□□□ 1.52
SYMPK-212ENST00000598896 TAF5Q15542 800 aa24.57■■□□□ 1.52
SYMPK-212ENST00000598896 WHAMMP3Q1A5X7 153 aa24.57■■□□□ 1.52
SYMPK-212ENST00000598896 ALG3Q92685 438 aa24.57■■□□□ 1.52
SYMPK-212ENST00000598896 IGSF21Q96ID5 467 aa24.57■■□□□ 1.52
SYMPK-212ENST00000598896 CYLDQ9NQC7 956 aa24.57■■□□□ 1.52
SYMPK-212ENST00000598896 EHD2Q9NZN4 543 aa24.57■■□□□ 1.52
SYMPK-212ENST00000598896 PDE2AO00408 941 aaPredicted RBP24.56■■□□□ 1.52
SYMPK-212ENST00000598896 SLU7O95391 586 aaKnown RBP24.56■■□□□ 1.52
SYMPK-212ENST00000598896 BDNFP23560 247 aa24.56■■□□□ 1.52
SYMPK-212ENST00000598896 MAPRE1Q15691 268 aaKnown RBP24.56■■□□□ 1.52
SYMPK-212ENST00000598896 CTXN3Q4LDR2 81 aa24.56■■□□□ 1.52
SYMPK-212ENST00000598896 SLC39A12Q504Y0 691 aa24.56■■□□□ 1.52
SYMPK-212ENST00000598896 SPOUT1Q5T280 376 aaKnown RBP24.56■■□□□ 1.52
SYMPK-212ENST00000598896 DCAF12L1Q5VU92 463 aa24.56■■□□□ 1.52
SYMPK-212ENST00000598896 TRNP1Q6NT89 227 aa24.56■■□□□ 1.52
SYMPK-212ENST00000598896 RNF168Q8IYW5 571 aaPredicted RBP24.56■■□□□ 1.52
SYMPK-212ENST00000598896 MYRIPQ8NFW9 859 aa24.56■■□□□ 1.52
SYMPK-212ENST00000598896 YME1L1Q96TA2 773 aa24.56■■□□□ 1.52
SYMPK-212ENST00000598896 CSNK1G1Q9HCP0 422 aa24.56■■□□□ 1.52
SYMPK-212ENST00000598896 IP6K2Q9UHH9 426 aa24.56■■□□□ 1.52
SYMPK-212ENST00000598896 ZMYND8Q9ULU4 1186 aaPredicted RBP24.56■■□□□ 1.52
SYMPK-212ENST00000598896 ADIGQ0VDE8 80 aa24.55■■□□□ 1.52
SYMPK-212ENST00000598896 KCTD13Q8WZ19 329 aa24.55■■□□□ 1.52
SYMPK-212ENST00000598896 KHSRPQ92945 711 aaKnown RBP eCLIP24.55■■□□□ 1.52
SYMPK-212ENST00000598896 MS4A14Q96JA4 679 aa24.55■■□□□ 1.52
SYMPK-212ENST00000598896 SMARCAL1Q9NZC9 954 aa24.55■■□□□ 1.52
SYMPK-212ENST00000598896 TMEM59LQ9UK28 342 aa24.55■■□□□ 1.52
SYMPK-212ENST00000598896 GRAP2O75791 330 aa24.55■■□□□ 1.52
SYMPK-212ENST00000598896 GJB5O95377 273 aa24.55■■□□□ 1.52
SYMPK-212ENST00000598896 CTNNA1P35221 906 aaKnown RBP24.55■■□□□ 1.52
SYMPK-212ENST00000598896 SLC6A3Q01959 620 aa24.55■■□□□ 1.52
SYMPK-212ENST00000598896 ZNF280DQ6N043 979 aa24.55■■□□□ 1.52
SYMPK-212ENST00000598896 RSPO2Q6UXX9 243 aaPredicted RBP24.55■■□□□ 1.52
SYMPK-212ENST00000598896 GPRIN1Q7Z2K8 1008 aa24.55■■□□□ 1.52
SYMPK-212ENST00000598896 MIF4GDA9UHW6 222 aaKnown RBP24.54■■□□□ 1.52
SYMPK-212ENST00000598896 HHLA1C9JL84 531 aa24.54■■□□□ 1.52
SYMPK-212ENST00000598896 F8VP50 259 aa24.54■■□□□ 1.52
SYMPK-212ENST00000598896 CAPN15O75808 1086 aa24.54■■□□□ 1.52
SYMPK-212ENST00000598896 SLC1A1P43005 524 aa24.54■■□□□ 1.52
SYMPK-212ENST00000598896 ACADSBP45954 432 aa24.54■■□□□ 1.52
SYMPK-212ENST00000598896 RNASE9P60153 205 aaKnown RBP24.54■■□□□ 1.52
SYMPK-212ENST00000598896 PSRC1Q6PGN9 363 aaPredicted RBP24.54■■□□□ 1.52
SYMPK-212ENST00000598896 ZDHHC17Q8IUH5 632 aa24.54■■□□□ 1.52
SYMPK-212ENST00000598896 SLC39A11Q8N1S5 342 aa24.54■■□□□ 1.52
SYMPK-212ENST00000598896 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.54■■□□□ 1.52
SYMPK-212ENST00000598896 ZNF558Q96NG5 402 aa24.54■■□□□ 1.52
SYMPK-212ENST00000598896 TTPALQ9BTX7 342 aa24.54■■□□□ 1.52
SYMPK-212ENST00000598896 TBC1D4O60343 1298 aa24.53■■□□□ 1.52
SYMPK-212ENST00000598896 MAN1A1P33908 653 aa24.53■■□□□ 1.52
SYMPK-212ENST00000598896 FLT3P36888 993 aa24.53■■□□□ 1.52
SYMPK-212ENST00000598896 NDUFV1P49821 464 aa24.53■■□□□ 1.52
SYMPK-212ENST00000598896 PEX5P50542 639 aa24.53■■□□□ 1.52
SYMPK-212ENST00000598896 SNX16P57768 344 aa24.53■■□□□ 1.52
SYMPK-212ENST00000598896 ADCY1Q08828 1119 aa24.53■■□□□ 1.52
SYMPK-212ENST00000598896 FNIP1Q8TF40 1166 aa24.53■■□□□ 1.52
SYMPK-212ENST00000598896 USTQ9Y2C2 406 aa24.53■■□□□ 1.52
SYMPK-212ENST00000598896 PATJQ8NI35 1801 aa24.53■■□□□ 1.52
SYMPK-212ENST00000598896 TCF4P15884 667 aa24.53■■□□□ 1.52
SYMPK-212ENST00000598896 CTNNA2P26232 953 aa24.53■■□□□ 1.52
SYMPK-212ENST00000598896 TAS2R40P59535 323 aa24.53■■□□□ 1.52
SYMPK-212ENST00000598896 HTRA4P83105 476 aaPredicted RBP24.53■■□□□ 1.52
SYMPK-212ENST00000598896 PRSS55Q6UWB4 352 aaPredicted RBP24.53■■□□□ 1.52
SYMPK-212ENST00000598896 SPATA2LQ8IUW3 424 aaPredicted RBP24.53■■□□□ 1.52
SYMPK-212ENST00000598896 NIPA2Q8N8Q9 360 aa24.53■■□□□ 1.52
SYMPK-212ENST00000598896 COLGALT1Q8NBJ5 622 aa24.53■■□□□ 1.52
SYMPK-212ENST00000598896 NDRG1Q92597 394 aaKnown RBP24.53■■□□□ 1.52
SYMPK-212ENST00000598896 HTATIP2Q9BUP3 242 aa24.53■■□□□ 1.52
SYMPK-212ENST00000598896 PCDHA3Q9Y5H8 950 aa24.53■■□□□ 1.52
SYMPK-212ENST00000598896 OR6C75A6NL08 312 aa24.52■■□□□ 1.52
SYMPK-212ENST00000598896 C2CD4BA6NLJ0 364 aa24.52■■□□□ 1.52
SYMPK-212ENST00000598896 LAG3P18627 525 aa24.52■■□□□ 1.52
SYMPK-212ENST00000598896 CYP2F1P24903 491 aa24.52■■□□□ 1.52
SYMPK-212ENST00000598896 PIGHQ14442 188 aaPredicted RBP24.52■■□□□ 1.52
SYMPK-212ENST00000598896 C4orf50Q6ZRC1 276 aa24.52■■□□□ 1.52
SYMPK-212ENST00000598896 DCP1BQ8IZD4 617 aaKnown RBP24.52■■□□□ 1.52
SYMPK-212ENST00000598896 LRRC4Q9HBW1 653 aa24.52■■□□□ 1.52
SYMPK-212ENST00000598896 DMAP1Q9NPF5 467 aaPredicted RBP24.52■■□□□ 1.52
SYMPK-212ENST00000598896 ABI2Q9NYB9 513 aaPredicted RBP24.52■■□□□ 1.52
SYMPK-212ENST00000598896 CES2O00748 559 aa24.51■■□□□ 1.51
SYMPK-212ENST00000598896 LINC00271P0C7V0 271 aa24.51■■□□□ 1.51
SYMPK-212ENST00000598896 PSMA2P25787 234 aa24.51■■□□□ 1.51
SYMPK-212ENST00000598896 TKTL1P51854 596 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms