RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 MMRN2Q9H8L6 949 aa14.66□□□□□ -0.06
SCAF1-203ENST00000598359 HPS4Q9NQG7 708 aa14.66□□□□□ -0.06
SCAF1-203ENST00000598359 LMBRD1Q9NUN5 540 aa14.66□□□□□ -0.06
SCAF1-203ENST00000598359 HMGXB4Q9UGU5 601 aa14.66□□□□□ -0.06
SCAF1-203ENST00000598359 FRMD4BQ9Y2L6 1034 aa14.66□□□□□ -0.06
SCAF1-203ENST00000598359 ACACBO00763 2458 aa14.65□□□□□ -0.06
SCAF1-203ENST00000598359 DENND4CQ5VZ89 1909 aa14.65□□□□□ -0.06
SCAF1-203ENST00000598359 HLA-DRAP01903 254 aa14.65□□□□□ -0.06
SCAF1-203ENST00000598359 CKMP06732 381 aa14.65□□□□□ -0.06
SCAF1-203ENST00000598359 ANXA13P27216 316 aa14.65□□□□□ -0.06
SCAF1-203ENST00000598359 HOXC13P31276 330 aa14.65□□□□□ -0.06
SCAF1-203ENST00000598359 MAGEA9P43362 315 aa14.65□□□□□ -0.06
SCAF1-203ENST00000598359 GCLMP48507 274 aa14.65□□□□□ -0.06
SCAF1-203ENST00000598359 AP3M2P53677 418 aa14.65□□□□□ -0.06
SCAF1-203ENST00000598359 IFRD2Q12894 506 aaPredicted RBP14.65□□□□□ -0.06
SCAF1-203ENST00000598359 KCNB1Q14721 858 aa14.65□□□□□ -0.06
SCAF1-203ENST00000598359 ZACNQ401N2 412 aa14.65□□□□□ -0.06
SCAF1-203ENST00000598359 NAIF1Q69YI7 327 aaPredicted RBP14.65□□□□□ -0.06
SCAF1-203ENST00000598359 Q6ZS52 159 aa14.65□□□□□ -0.06
SCAF1-203ENST00000598359 DENND5BQ6ZUT9 1274 aa14.65□□□□□ -0.06
SCAF1-203ENST00000598359 GUF1Q8N442 669 aaKnown RBP14.65□□□□□ -0.06
SCAF1-203ENST00000598359 TMC2Q8TDI7 906 aa14.65□□□□□ -0.06
SCAF1-203ENST00000598359 SPATA17Q96L03 361 aa14.65□□□□□ -0.06
SCAF1-203ENST00000598359 FAM83CQ9BQN1 747 aa14.65□□□□□ -0.06
SCAF1-203ENST00000598359 CHRDQ9H2X0 955 aa14.65□□□□□ -0.06
SCAF1-203ENST00000598359 C8orf33Q9H7E9 229 aaPredicted RBP14.65□□□□□ -0.06
SCAF1-203ENST00000598359 VRTNQ9H8Y1 702 aa14.65□□□□□ -0.06
SCAF1-203ENST00000598359 THG1LQ9NWX6 298 aaKnown RBP14.65□□□□□ -0.06
SCAF1-203ENST00000598359 GCNT4Q9P109 453 aa14.65□□□□□ -0.06
SCAF1-203ENST00000598359 FBXO4Q9UKT5 387 aa14.65□□□□□ -0.06
SCAF1-203ENST00000598359 KIF26AQ9ULI4 1882 aaPredicted RBP14.65□□□□□ -0.06
SCAF1-203ENST00000598359 FANCMQ8IYD8 2048 aa14.65□□□□□ -0.06
SCAF1-203ENST00000598359 TRAV19A0A0A6YYK7 116 aa14.64□□□□□ -0.07
SCAF1-203ENST00000598359 FAM163BP0C2L3 166 aa14.64□□□□□ -0.07
SCAF1-203ENST00000598359 PIK3CAP42336 1068 aa14.64□□□□□ -0.07
SCAF1-203ENST00000598359 VAMP7P51809 220 aa14.64□□□□□ -0.07
SCAF1-203ENST00000598359 PLCB2Q00722 1185 aa14.64□□□□□ -0.07
SCAF1-203ENST00000598359 SATB1Q01826 763 aa14.64□□□□□ -0.07
SCAF1-203ENST00000598359 PPP3CAQ08209 521 aa14.64□□□□□ -0.07
SCAF1-203ENST00000598359 ITPRIPL2Q3MIP1 535 aa14.64□□□□□ -0.07
SCAF1-203ENST00000598359 PAQR9Q6ZVX9 377 aa14.64□□□□□ -0.07
SCAF1-203ENST00000598359 ACOT1Q86TX2 421 aa14.64□□□□□ -0.07
SCAF1-203ENST00000598359 RALGPS2Q86X27 583 aaPredicted RBP14.64□□□□□ -0.07
SCAF1-203ENST00000598359 FAM186BQ8IYM0 893 aa14.64□□□□□ -0.07
SCAF1-203ENST00000598359 CHFRQ96EP1 664 aa14.64□□□□□ -0.07
SCAF1-203ENST00000598359 C8orf48Q96LL4 319 aa14.64□□□□□ -0.07
SCAF1-203ENST00000598359 CNTNAP3BQ96NU0 1288 aa14.64□□□□□ -0.07
SCAF1-203ENST00000598359 MED10Q9BTT4 135 aa14.64□□□□□ -0.07
SCAF1-203ENST00000598359 CNTNAP3Q9BZ76 1288 aa14.64□□□□□ -0.07
SCAF1-203ENST00000598359 PRMT8Q9NR22 394 aaPredicted RBP14.64□□□□□ -0.07
SCAF1-203ENST00000598359 C2orf42Q9NWW7 574 aa14.64□□□□□ -0.07
SCAF1-203ENST00000598359 WNT6Q9Y6F9 365 aa14.64□□□□□ -0.07
SCAF1-203ENST00000598359 PTPRDP23468 1912 aa14.64□□□□□ -0.07
SCAF1-203ENST00000598359 GREB1Q4ZG55 1949 aa14.63□□□□□ -0.07
SCAF1-203ENST00000598359 GOLGA6L4A6NEF3 574 aa14.63□□□□□ -0.07
SCAF1-203ENST00000598359 TRIM66O15016 1216 aa14.63□□□□□ -0.07
SCAF1-203ENST00000598359 KIF20AO95235 890 aa14.63□□□□□ -0.07
SCAF1-203ENST00000598359 ABL1P00519 1130 aa14.63□□□□□ -0.07
SCAF1-203ENST00000598359 LMNAP02545 664 aaKnown RBP14.63□□□□□ -0.07
SCAF1-203ENST00000598359 USP17L7P0C7H9 530 aa14.63□□□□□ -0.07
SCAF1-203ENST00000598359 CCDC130P13994 396 aa14.63□□□□□ -0.07
SCAF1-203ENST00000598359 NDST1P52848 882 aa14.63□□□□□ -0.07
SCAF1-203ENST00000598359 MLLT6P55198 1093 aaPredicted RBP14.63□□□□□ -0.07
SCAF1-203ENST00000598359 ZXDBP98169 803 aa14.63□□□□□ -0.07
SCAF1-203ENST00000598359 ADAM9Q13443 819 aa14.63□□□□□ -0.07
SCAF1-203ENST00000598359 RUNX3Q13761 415 aa14.63□□□□□ -0.07
SCAF1-203ENST00000598359 MTF1Q14872 753 aa14.63□□□□□ -0.07
SCAF1-203ENST00000598359 ZNF77Q15935 545 aa14.63□□□□□ -0.07
SCAF1-203ENST00000598359 SGSM1Q2NKQ1 1148 aa14.63□□□□□ -0.07
SCAF1-203ENST00000598359 ZNF528Q3MIS6 628 aa14.63□□□□□ -0.07
SCAF1-203ENST00000598359 ZCWPW2Q504Y3 356 aa14.63□□□□□ -0.07
SCAF1-203ENST00000598359 CC2D1AQ6P1N0 951 aaPredicted RBP14.63□□□□□ -0.07
SCAF1-203ENST00000598359 ZC3H14Q6PJT7 736 aaKnown RBP14.63□□□□□ -0.07
SCAF1-203ENST00000598359 FAM35AQ86V20 835 aa14.63□□□□□ -0.07
SCAF1-203ENST00000598359 ENGASEQ8NFI3 743 aa14.63□□□□□ -0.07
SCAF1-203ENST00000598359 TAS1R2Q8TE23 839 aa14.63□□□□□ -0.07
SCAF1-203ENST00000598359 SH3RF2Q8TEC5 729 aa14.63□□□□□ -0.07
SCAF1-203ENST00000598359 KCNK16Q96T55 309 aa14.63□□□□□ -0.07
SCAF1-203ENST00000598359 TTLL2Q9BWV7 592 aa14.63□□□□□ -0.07
SCAF1-203ENST00000598359 ELOVL4Q9GZR5 314 aa14.63□□□□□ -0.07
SCAF1-203ENST00000598359 KIF9Q9HAQ2 790 aa14.63□□□□□ -0.07
SCAF1-203ENST00000598359 APOBEC3GQ9HC16 384 aaKnown RBP14.63□□□□□ -0.07
SCAF1-203ENST00000598359 TRPM5Q9NZQ8 1165 aa14.63□□□□□ -0.07
SCAF1-203ENST00000598359 ZMYM5Q9UJ78 669 aa14.63□□□□□ -0.07
SCAF1-203ENST00000598359 SPTBN2O15020 2390 aa14.62□□□□□ -0.07
SCAF1-203ENST00000598359 SCAMP3O14828 347 aaKnown RBP14.62□□□□□ -0.07
SCAF1-203ENST00000598359 IKBKBO14920 756 aa14.62□□□□□ -0.07
SCAF1-203ENST00000598359 ASS1P00966 412 aaKnown RBP14.62□□□□□ -0.07
SCAF1-203ENST00000598359 TDGF1P13385 188 aa14.62□□□□□ -0.07
SCAF1-203ENST00000598359 HDCP19113 662 aa14.62□□□□□ -0.07
SCAF1-203ENST00000598359 PRCPP42785 496 aa14.62□□□□□ -0.07
SCAF1-203ENST00000598359 ASPAP45381 313 aa14.62□□□□□ -0.07
SCAF1-203ENST00000598359 NOP14P78316 857 aaKnown RBP14.62□□□□□ -0.07
SCAF1-203ENST00000598359 FAM160A1Q05DH4 1040 aa14.62□□□□□ -0.07
SCAF1-203ENST00000598359 DMWDQ09019 674 aa14.62□□□□□ -0.07
SCAF1-203ENST00000598359 TAF10Q12962 218 aa14.62□□□□□ -0.07
SCAF1-203ENST00000598359 USP4Q13107 963 aa14.62□□□□□ -0.07
SCAF1-203ENST00000598359 ZNF268Q14587 947 aaPredicted RBP14.62□□□□□ -0.07
SCAF1-203ENST00000598359 PUM1Q14671 1186 aaKnown RBP eCLIP14.62□□□□□ -0.07
SCAF1-203ENST00000598359 NFIL3Q16649 462 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms