RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	CCDC163	A0A0D9SF12	145 aa		11.24	□□□□□ -0.61
LSM4-205	ENST00000597776	ANTXRL	A6NF34	631 aa		11.24	□□□□□ -0.61
LSM4-205	ENST00000597776		F8VP50	259 aa		11.24	□□□□□ -0.61
LSM4-205	ENST00000597776	CLDN5	O00501	218 aa		11.24	□□□□□ -0.61
LSM4-205	ENST00000597776	POLR2D	O15514	142 aa	Known RBP	11.24	□□□□□ -0.61
LSM4-205	ENST00000597776	CUTA	O60888	179 aa		11.24	□□□□□ -0.61
LSM4-205	ENST00000597776	TNNI1	P19237	187 aa		11.24	□□□□□ -0.61
LSM4-205	ENST00000597776	ANXA13	P27216	316 aa		11.24	□□□□□ -0.61
LSM4-205	ENST00000597776	GNL1	P36915	607 aa	Predicted RBP	11.24	□□□□□ -0.61
LSM4-205	ENST00000597776	RAP1GAP	P47736	663 aa		11.24	□□□□□ -0.61
LSM4-205	ENST00000597776	AMPD3	Q01432	767 aa		11.24	□□□□□ -0.61
LSM4-205	ENST00000597776	CYP24A1	Q07973	514 aa		11.24	□□□□□ -0.61
LSM4-205	ENST00000597776	PSMD2	Q13200	908 aa		11.24	□□□□□ -0.61
LSM4-205	ENST00000597776	PSMD6	Q15008	389 aa		11.24	□□□□□ -0.61
LSM4-205	ENST00000597776	MAPRE1	Q15691	268 aa	Known RBP	11.24	□□□□□ -0.61
LSM4-205	ENST00000597776	AASDH	Q4L235	1098 aa	Predicted RBP	11.24	□□□□□ -0.61
LSM4-205	ENST00000597776	CNNM4	Q6P4Q7	775 aa		11.24	□□□□□ -0.61
LSM4-205	ENST00000597776	DENND5B	Q6ZUT9	1274 aa		11.24	□□□□□ -0.61
LSM4-205	ENST00000597776	HS2ST1	Q7LGA3	356 aa		11.24	□□□□□ -0.61
LSM4-205	ENST00000597776	IQUB	Q8NA54	791 aa		11.24	□□□□□ -0.61
LSM4-205	ENST00000597776	OR6B3	Q8NGW1	331 aa		11.24	□□□□□ -0.61
LSM4-205	ENST00000597776	MYCBPAP	Q8TBZ2	947 aa		11.24	□□□□□ -0.61
LSM4-205	ENST00000597776	SCFD1	Q8WVM8	642 aa		11.24	□□□□□ -0.61
LSM4-205	ENST00000597776	ZNF516	Q92618	1163 aa		11.24	□□□□□ -0.61
LSM4-205	ENST00000597776	ZNF396	Q96N95	335 aa	Predicted RBP	11.24	□□□□□ -0.61
LSM4-205	ENST00000597776	FNBP1	Q96RU3	617 aa		11.24	□□□□□ -0.61
LSM4-205	ENST00000597776	C7orf25	Q9BPX7	421 aa		11.24	□□□□□ -0.61
LSM4-205	ENST00000597776	ZNF518B	Q9C0D4	1074 aa		11.24	□□□□□ -0.61
LSM4-205	ENST00000597776	SNX25	Q9H3E2	840 aa		11.24	□□□□□ -0.61
LSM4-205	ENST00000597776	SMPD4	Q9NXE4	827 aa		11.24	□□□□□ -0.61
LSM4-205	ENST00000597776	GREB1	Q4ZG55	1949 aa		11.24	□□□□□ -0.61
LSM4-205	ENST00000597776	HELZ	P42694	1942 aa	Known RBP	11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	ZNF840P	A6NDX5	716 aa		11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	LEFTY2	O00292	366 aa		11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	DCLK1	O15075	740 aa		11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	EPN2	O95208	641 aa		11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	YEATS4	O95619	227 aa		11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	ABL1	P00519	1130 aa		11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	CASP4	P49662	377 aa		11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	SEC13	P55735	322 aa		11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	MYL6	P60660	151 aa		11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	TNNC1	P63316	161 aa		11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	EHHADH	Q08426	723 aa		11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	IFRD2	Q12894	506 aa	Predicted RBP	11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	DMC1	Q14565	340 aa		11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	GAB4	Q2WGN9	574 aa		11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	WDR72	Q3MJ13	1102 aa		11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	FBXO43	Q4G163	708 aa		11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	UNC13D	Q70J99	1090 aa		11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	SYT13	Q7L8C5	426 aa		11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	GRAMD1C	Q8IYS0	662 aa		11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	CAMKK1	Q8N5S9	505 aa		11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	C12orf50	Q8NA57	414 aa	Predicted RBP	11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	XXYLT1	Q8NBI6	393 aa		11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	EXOC4	Q96A65	974 aa		11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	ELMO3	Q96BJ8	720 aa		11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	TTLL2	Q9BWV7	592 aa		11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	BACH2	Q9BYV9	841 aa		11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	RNF38	Q9H0F5	515 aa		11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	TRPM5	Q9NZQ8	1165 aa		11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	NXF1	Q9UBU9	619 aa	Known RBP	11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	UBE4B	O95155	1302 aa		11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	PTPRD	P23468	1912 aa		11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	EML5	Q05BV3	1969 aa		11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	RALGAPA1	Q6GYQ0	2036 aa		11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	SDK1	Q7Z5N4	2213 aa		11.23	□□□□□ -0.61
LSM4-205	ENST00000597776	TRIM66	O15016	1216 aa		11.22	□□□□□ -0.61
LSM4-205	ENST00000597776	TACC1	O75410	805 aa		11.22	□□□□□ -0.61
LSM4-205	ENST00000597776	AKAP3	O75969	853 aa		11.22	□□□□□ -0.61
LSM4-205	ENST00000597776	NFATC1	O95644	943 aa		11.22	□□□□□ -0.61
LSM4-205	ENST00000597776	APBB3	O95704	486 aa		11.22	□□□□□ -0.61
LSM4-205	ENST00000597776	ADRB1	P08588	477 aa		11.22	□□□□□ -0.61
LSM4-205	ENST00000597776	ZNF806	P0C7X5	589 aa		11.22	□□□□□ -0.61
LSM4-205	ENST00000597776	TCF3	P15923	654 aa		11.22	□□□□□ -0.61
LSM4-205	ENST00000597776	PTPN1	P18031	435 aa	Known RBP	11.22	□□□□□ -0.61
LSM4-205	ENST00000597776	MPL	P40238	635 aa		11.22	□□□□□ -0.61
LSM4-205	ENST00000597776	OPRD1	P41143	372 aa		11.22	□□□□□ -0.61
LSM4-205	ENST00000597776	AFM	P43652	599 aa		11.22	□□□□□ -0.61
LSM4-205	ENST00000597776	NOP14	P78316	857 aa	Known RBP	11.22	□□□□□ -0.61
LSM4-205	ENST00000597776	TAF10	Q12962	218 aa		11.22	□□□□□ -0.61
LSM4-205	ENST00000597776	NR1H3	Q13133	447 aa		11.22	□□□□□ -0.61
LSM4-205	ENST00000597776	CUL4B	Q13620	913 aa		11.22	□□□□□ -0.61
LSM4-205	ENST00000597776	PLK5	Q496M5	336 aa		11.22	□□□□□ -0.61
LSM4-205	ENST00000597776	TCEAL6	Q6IPX3	200 aa		11.22	□□□□□ -0.61
LSM4-205	ENST00000597776	KIAA1549L	Q6ZVL6	1849 aa		11.22	□□□□□ -0.61
LSM4-205	ENST00000597776	FILIP1	Q7Z7B0	1213 aa		11.22	□□□□□ -0.61
LSM4-205	ENST00000597776	SFTPA1	Q8IWL2	248 aa		11.22	□□□□□ -0.61
LSM4-205	ENST00000597776	B3GALNT2	Q8NCR0	500 aa		11.22	□□□□□ -0.61
LSM4-205	ENST00000597776	PLEKHO2	Q8TD55	490 aa		11.22	□□□□□ -0.61
LSM4-205	ENST00000597776	TCEAL3	Q969E4	200 aa		11.22	□□□□□ -0.61
LSM4-205	ENST00000597776	ACD	Q96AP0	544 aa		11.22	□□□□□ -0.61
LSM4-205	ENST00000597776	LOXL4	Q96JB6	756 aa		11.22	□□□□□ -0.61
LSM4-205	ENST00000597776	C8orf48	Q96LL4	319 aa		11.22	□□□□□ -0.61
LSM4-205	ENST00000597776	B3GNT5	Q9BYG0	378 aa		11.22	□□□□□ -0.61
LSM4-205	ENST00000597776	XYLT2	Q9H1B5	865 aa		11.22	□□□□□ -0.61
LSM4-205	ENST00000597776	SMYD3	Q9H7B4	428 aa		11.22	□□□□□ -0.61
LSM4-205	ENST00000597776	SLC39A2	Q9NP94	309 aa		11.22	□□□□□ -0.61
LSM4-205	ENST00000597776	INVS	Q9Y283	1065 aa		11.22	□□□□□ -0.61
LSM4-205	ENST00000597776	CPQ	Q9Y646	472 aa		11.22	□□□□□ -0.61
LSM4-205	ENST00000597776	MYO16	Q9Y6X6	1858 aa		11.22	□□□□□ -0.61

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