RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 SNRPFP62306 86 aaKnown RBP16.18■□□□□ 0.18
TGFB1-202ENST00000597453 SIM2Q14190 667 aaPredicted RBP16.18■□□□□ 0.18
TGFB1-202ENST00000597453 PDGFRLQ15198 375 aa16.18■□□□□ 0.18
TGFB1-202ENST00000597453 MDH1BQ5I0G3 518 aa16.18■□□□□ 0.18
TGFB1-202ENST00000597453 LAIR1Q6GTX8 287 aa16.18■□□□□ 0.18
TGFB1-202ENST00000597453 CC2D1AQ6P1N0 951 aaPredicted RBP16.18■□□□□ 0.18
TGFB1-202ENST00000597453 HS2ST1Q7LGA3 356 aa16.18■□□□□ 0.18
TGFB1-202ENST00000597453 C12orf56Q8IXR9 622 aa16.18■□□□□ 0.18
TGFB1-202ENST00000597453 GPR161Q8N6U8 529 aaKnown RBP16.18■□□□□ 0.18
TGFB1-202ENST00000597453 ARL14EPQ8N8R7 260 aaPredicted RBP16.18■□□□□ 0.18
TGFB1-202ENST00000597453 MYCBPAPQ8TBZ2 947 aa16.18■□□□□ 0.18
TGFB1-202ENST00000597453 SPATA17Q96L03 361 aa16.18■□□□□ 0.18
TGFB1-202ENST00000597453 DPEP3Q9H4B8 488 aa16.18■□□□□ 0.18
TGFB1-202ENST00000597453 TMEM30AQ9NV96 361 aa16.18■□□□□ 0.18
TGFB1-202ENST00000597453 RAB23Q9ULC3 237 aa16.18■□□□□ 0.18
TGFB1-202ENST00000597453 USP18Q9UMW8 372 aa16.18■□□□□ 0.18
TGFB1-202ENST00000597453 WNT6Q9Y6F9 365 aa16.18■□□□□ 0.18
TGFB1-202ENST00000597453 GOLGA6L4A6NEF3 574 aa16.17■□□□□ 0.18
TGFB1-202ENST00000597453 KLRC4O43908 158 aa16.17■□□□□ 0.18
TGFB1-202ENST00000597453 TACC1O75410 805 aa16.17■□□□□ 0.18
TGFB1-202ENST00000597453 GJA4P35212 333 aa16.17■□□□□ 0.18
TGFB1-202ENST00000597453 GNL1P36915 607 aaPredicted RBP16.17■□□□□ 0.18
TGFB1-202ENST00000597453 GRIK1P39086 918 aa16.17■□□□□ 0.18
TGFB1-202ENST00000597453 CACNA2D1P54289 1103 aa16.17■□□□□ 0.18
TGFB1-202ENST00000597453 MYL6P60660 151 aa16.17■□□□□ 0.18
TGFB1-202ENST00000597453 SPEM2Q0P670 501 aa16.17■□□□□ 0.18
TGFB1-202ENST00000597453 GRSF1Q12849 480 aaKnown RBP eCLIP16.17■□□□□ 0.18
TGFB1-202ENST00000597453 MAPRE1Q15691 268 aaKnown RBP16.17■□□□□ 0.18
TGFB1-202ENST00000597453 WDR72Q3MJ13 1102 aa16.17■□□□□ 0.18
TGFB1-202ENST00000597453 OR6B3Q8NGW1 331 aa16.17■□□□□ 0.18
TGFB1-202ENST00000597453 OSCP1Q8WVF1 389 aa16.17■□□□□ 0.18
TGFB1-202ENST00000597453 XYLT2Q9H1B5 865 aa16.17■□□□□ 0.18
TGFB1-202ENST00000597453 SNX25Q9H3E2 840 aa16.17■□□□□ 0.18
TGFB1-202ENST00000597453 ECT2Q9H8V3 914 aa16.17■□□□□ 0.18
TGFB1-202ENST00000597453 POLR3BQ9NW08 1133 aaPredicted RBP16.17■□□□□ 0.18
TGFB1-202ENST00000597453 DUS2Q9NX74 493 aaKnown RBP16.17■□□□□ 0.18
TGFB1-202ENST00000597453 EXOC3O60645 756 aa16.16■□□□□ 0.18
TGFB1-202ENST00000597453 RNF40O75150 1001 aa16.16■□□□□ 0.18
TGFB1-202ENST00000597453 ZNF202O95125 648 aa16.16■□□□□ 0.18
TGFB1-202ENST00000597453 STAU1O95793 577 aaKnown RBP16.16■□□□□ 0.18
TGFB1-202ENST00000597453 HOXA6P31267 233 aa16.16■□□□□ 0.18
TGFB1-202ENST00000597453 PXNP49023 591 aaPredicted RBP16.16■□□□□ 0.18
TGFB1-202ENST00000597453 GALK1P51570 392 aa16.16■□□□□ 0.18
TGFB1-202ENST00000597453 TNNC1P63316 161 aa16.16■□□□□ 0.18
TGFB1-202ENST00000597453 ZXDBP98169 803 aa16.16■□□□□ 0.18
TGFB1-202ENST00000597453 KCNB1Q14721 858 aa16.16■□□□□ 0.18
TGFB1-202ENST00000597453 KNOP1Q1ED39 458 aaKnown RBP16.16■□□□□ 0.18
TGFB1-202ENST00000597453 EML3Q32P44 896 aa16.16■□□□□ 0.18
TGFB1-202ENST00000597453 KRBA2Q6ZNG9 492 aa16.16■□□□□ 0.18
TGFB1-202ENST00000597453 DENND5BQ6ZUT9 1274 aa16.16■□□□□ 0.18
TGFB1-202ENST00000597453 CPA6Q8N4T0 437 aa16.16■□□□□ 0.18
TGFB1-202ENST00000597453 KIAA0895Q8NCT3 520 aa16.16■□□□□ 0.18
TGFB1-202ENST00000597453 SH3RF2Q8TEC5 729 aa16.16■□□□□ 0.18
TGFB1-202ENST00000597453 NXF1Q9UBU9 619 aaKnown RBP16.16■□□□□ 0.18
TGFB1-202ENST00000597453 F8VP50 259 aa16.15■□□□□ 0.18
TGFB1-202ENST00000597453 CLDN5O00501 218 aa16.15■□□□□ 0.18
TGFB1-202ENST00000597453 TRIM66O15016 1216 aa16.15■□□□□ 0.18
TGFB1-202ENST00000597453 RETP07949 1114 aa16.15■□□□□ 0.18
TGFB1-202ENST00000597453 PTPN1P18031 435 aaKnown RBP16.15■□□□□ 0.18
TGFB1-202ENST00000597453 HDCP19113 662 aa16.15■□□□□ 0.18
TGFB1-202ENST00000597453 ANXA13P27216 316 aa16.15■□□□□ 0.18
TGFB1-202ENST00000597453 CNR2P34972 360 aa16.15■□□□□ 0.18
TGFB1-202ENST00000597453 IFNAR2P48551 515 aa16.15■□□□□ 0.18
TGFB1-202ENST00000597453 LMNB2Q03252 620 aa16.15■□□□□ 0.18
TGFB1-202ENST00000597453 STK4Q13043 487 aa16.15■□□□□ 0.18
TGFB1-202ENST00000597453 TRPC3Q13507 836 aa16.15■□□□□ 0.18
TGFB1-202ENST00000597453 TDRD10Q5VZ19 366 aaKnown RBP16.15■□□□□ 0.18
TGFB1-202ENST00000597453 WDR5BQ86VZ2 330 aa16.15■□□□□ 0.18
TGFB1-202ENST00000597453 FMR1NBQ8N0W7 255 aaPredicted RBP16.15■□□□□ 0.18
TGFB1-202ENST00000597453 EZH1Q92800 747 aaPredicted RBP16.15■□□□□ 0.18
TGFB1-202ENST00000597453 ELMO3Q96BJ8 720 aa16.15■□□□□ 0.18
TGFB1-202ENST00000597453 C8orf48Q96LL4 319 aa16.15■□□□□ 0.18
TGFB1-202ENST00000597453 CEP295NLQ96MC4 621 aa16.15■□□□□ 0.18
TGFB1-202ENST00000597453 P2RY13Q9BPV8 354 aa16.15■□□□□ 0.18
TGFB1-202ENST00000597453 TTLL2Q9BWV7 592 aa16.15■□□□□ 0.18
TGFB1-202ENST00000597453 ZNF518BQ9C0D4 1074 aa16.15■□□□□ 0.18
TGFB1-202ENST00000597453 LINC00597Q9H2U6 94 aa16.15■□□□□ 0.18
TGFB1-202ENST00000597453 CGNQ9P2M7 1197 aaKnown RBP16.15■□□□□ 0.18
TGFB1-202ENST00000597453 ARHGAP26Q9UNA1 814 aa16.15■□□□□ 0.18
TGFB1-202ENST00000597453 MYOFQ9NZM1 2061 aa16.14■□□□□ 0.17
TGFB1-202ENST00000597453 LRRIQ3A6PVS8 624 aaPredicted RBP16.14■□□□□ 0.17
TGFB1-202ENST00000597453 A8MXQ7 604 aa16.14■□□□□ 0.17
TGFB1-202ENST00000597453 FAM163BP0C2L3 166 aa16.14■□□□□ 0.17
TGFB1-202ENST00000597453 TCF3P15923 654 aa16.14■□□□□ 0.17
TGFB1-202ENST00000597453 DRD1P21728 446 aa16.14■□□□□ 0.17
TGFB1-202ENST00000597453 ATICP31939 592 aa16.14■□□□□ 0.17
TGFB1-202ENST00000597453 RAP1GAPP47736 663 aa16.14■□□□□ 0.17
TGFB1-202ENST00000597453 ATXN1P54253 815 aaKnown RBP16.14■□□□□ 0.17
TGFB1-202ENST00000597453 NOP14P78316 857 aaKnown RBP16.14■□□□□ 0.17
TGFB1-202ENST00000597453 AMPD2Q01433 879 aa16.14■□□□□ 0.17
TGFB1-202ENST00000597453 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.14■□□□□ 0.17
TGFB1-202ENST00000597453 FAM160A2Q8N612 972 aaPredicted RBP16.14■□□□□ 0.17
TGFB1-202ENST00000597453 ATP2A3Q93084 1043 aa16.14■□□□□ 0.17
TGFB1-202ENST00000597453 CCDC34Q96HJ3 373 aa16.14■□□□□ 0.17
TGFB1-202ENST00000597453 B3GNT5Q9BYG0 378 aa16.14■□□□□ 0.17
TGFB1-202ENST00000597453 SMYD3Q9H7B4 428 aa16.14■□□□□ 0.17
TGFB1-202ENST00000597453 EXOC1Q9NV70 894 aa16.14■□□□□ 0.17
TGFB1-202ENST00000597453 TRPM5Q9NZQ8 1165 aa16.14■□□□□ 0.17
TGFB1-202ENST00000597453 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.14■□□□□ 0.17
TGFB1-202ENST00000597453 ZNF840PA6NDX5 716 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms