RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 FUKQ8N0W3 1084 aa15.91■□□□□ 0.14
TRIM28-207ENST00000597136 RIPOR3Q96MK2 946 aa15.91■□□□□ 0.14
TRIM28-207ENST00000597136 CORO1BQ9BR76 489 aa15.91■□□□□ 0.14
TRIM28-207ENST00000597136 NT5C1AQ9BXI3 368 aa15.91■□□□□ 0.14
TRIM28-207ENST00000597136 HSFX1Q9UBD0 423 aa15.91■□□□□ 0.14
TRIM28-207ENST00000597136 PCDHB4Q9Y5E5 795 aa15.91■□□□□ 0.14
TRIM28-207ENST00000597136 GFPT2O94808 682 aa15.9■□□□□ 0.14
TRIM28-207ENST00000597136 KRT5P13647 590 aa15.9■□□□□ 0.14
TRIM28-207ENST00000597136 PTPN2P17706 415 aa15.9■□□□□ 0.14
TRIM28-207ENST00000597136 USP8P40818 1118 aa15.9■□□□□ 0.14
TRIM28-207ENST00000597136 ALDH1A3P47895 512 aa15.9■□□□□ 0.14
TRIM28-207ENST00000597136 MTMR3Q13615 1198 aa15.9■□□□□ 0.14
TRIM28-207ENST00000597136 CFAP221Q4G0U5 840 aa15.9■□□□□ 0.14
TRIM28-207ENST00000597136 POTEHQ6S545 545 aa15.9■□□□□ 0.14
TRIM28-207ENST00000597136 TMEM270Q6UE05 265 aa15.9■□□□□ 0.14
TRIM28-207ENST00000597136 C4orf50Q6ZRC1 276 aa15.9■□□□□ 0.14
TRIM28-207ENST00000597136 IRF2BP2Q7Z5L9 587 aa15.9■□□□□ 0.14
TRIM28-207ENST00000597136 DNAJB7Q7Z6W7 309 aaPredicted RBP15.9■□□□□ 0.14
TRIM28-207ENST00000597136 TTC39CQ8N584 583 aa15.9■□□□□ 0.14
TRIM28-207ENST00000597136 TNIP3Q96KP6 325 aa15.9■□□□□ 0.14
TRIM28-207ENST00000597136 WDR6Q9NNW5 1121 aaKnown RBP15.9■□□□□ 0.14
TRIM28-207ENST00000597136 CYP26A1O43174 497 aa15.89■□□□□ 0.13
TRIM28-207ENST00000597136 XYLBO75191 536 aa15.89■□□□□ 0.13
TRIM28-207ENST00000597136 BEST1O76090 585 aa15.89■□□□□ 0.13
TRIM28-207ENST00000597136 CLCN1P35523 988 aa15.89■□□□□ 0.13
TRIM28-207ENST00000597136 CCR2P41597 374 aa15.89■□□□□ 0.13
TRIM28-207ENST00000597136 ZNF132P52740 706 aa15.89■□□□□ 0.13
TRIM28-207ENST00000597136 ARID5AQ03989 594 aa15.89■□□□□ 0.13
TRIM28-207ENST00000597136 MAPRE1Q15691 268 aaKnown RBP15.89■□□□□ 0.13
TRIM28-207ENST00000597136 MEA1Q16626 185 aa15.89■□□□□ 0.13
TRIM28-207ENST00000597136 SLC5A9Q2M3M2 681 aa15.89■□□□□ 0.13
TRIM28-207ENST00000597136 TJAP1Q5JTD0 557 aa15.89■□□□□ 0.13
TRIM28-207ENST00000597136 PPP1R26Q5T8A7 1209 aaPredicted RBP15.89■□□□□ 0.13
TRIM28-207ENST00000597136 WDR59Q6PJI9 974 aa15.89■□□□□ 0.13
TRIM28-207ENST00000597136 GPIHBP1Q8IV16 184 aa15.89■□□□□ 0.13
TRIM28-207ENST00000597136 FMNL3Q8IVF7 1028 aa15.89■□□□□ 0.13
TRIM28-207ENST00000597136 ITFG1Q8TB96 612 aa15.89■□□□□ 0.13
TRIM28-207ENST00000597136 SLC2A14Q8TDB8 520 aa15.89■□□□□ 0.13
TRIM28-207ENST00000597136 TCEAL4Q96EI5 215 aa15.89■□□□□ 0.13
TRIM28-207ENST00000597136 CYFIP2Q96F07 1278 aa15.89■□□□□ 0.13
TRIM28-207ENST00000597136 TMEM176AQ96HP8 235 aa15.89■□□□□ 0.13
TRIM28-207ENST00000597136 FUBP3Q96I24 572 aaKnown RBP eCLIP15.89■□□□□ 0.13
TRIM28-207ENST00000597136 RPGRIP1Q96KN7 1286 aa15.89■□□□□ 0.13
TRIM28-207ENST00000597136 ZNF512Q96ME7 567 aaPredicted RBP15.89■□□□□ 0.13
TRIM28-207ENST00000597136 HEXIM2Q96MH2 286 aaKnown RBP15.89■□□□□ 0.13
TRIM28-207ENST00000597136 KCNK16Q96T55 309 aa15.89■□□□□ 0.13
TRIM28-207ENST00000597136 MED10Q9BTT4 135 aa15.89■□□□□ 0.13
TRIM28-207ENST00000597136 LRRC3Q9BY71 257 aa15.89■□□□□ 0.13
TRIM28-207ENST00000597136 ZNF334Q9HCZ1 680 aaPredicted RBP15.89■□□□□ 0.13
TRIM28-207ENST00000597136 ABCB6Q9NP58 842 aa15.89■□□□□ 0.13
TRIM28-207ENST00000597136 CD320Q9NPF0 282 aa15.89■□□□□ 0.13
TRIM28-207ENST00000597136 CLUHO75153 1309 aa15.88■□□□□ 0.13
TRIM28-207ENST00000597136 RHOP08100 348 aa15.88■□□□□ 0.13
TRIM28-207ENST00000597136 FERP16591 822 aa15.88■□□□□ 0.13
TRIM28-207ENST00000597136 GJA1P17302 382 aa15.88■□□□□ 0.13
TRIM28-207ENST00000597136 ADORA2BP29275 332 aa15.88■□□□□ 0.13
TRIM28-207ENST00000597136 GRIK1P39086 918 aa15.88■□□□□ 0.13
TRIM28-207ENST00000597136 MAGEA11P43364 429 aa15.88■□□□□ 0.13
TRIM28-207ENST00000597136 EPHB3P54753 998 aa15.88■□□□□ 0.13
TRIM28-207ENST00000597136 ASIC2Q16515 512 aa15.88■□□□□ 0.13
TRIM28-207ENST00000597136 CYP26C1Q6V0L0 522 aa15.88■□□□□ 0.13
TRIM28-207ENST00000597136 FAM35AQ86V20 835 aa15.88■□□□□ 0.13
TRIM28-207ENST00000597136 LRRC8AQ8IWT6 810 aa15.88■□□□□ 0.13
TRIM28-207ENST00000597136 RBBP8NLQ8NC74 664 aaPredicted RBP15.88■□□□□ 0.13
TRIM28-207ENST00000597136 NECTIN4Q96NY8 510 aa15.88■□□□□ 0.13
TRIM28-207ENST00000597136 PHF7Q9BWX1 381 aaPredicted RBP15.88■□□□□ 0.13
TRIM28-207ENST00000597136 ZNHIT6Q9NWK9 470 aaKnown RBP15.88■□□□□ 0.13
TRIM28-207ENST00000597136 F8VP50 259 aa15.87■□□□□ 0.13
TRIM28-207ENST00000597136 CCDC172P0C7W6 258 aa15.87■□□□□ 0.13
TRIM28-207ENST00000597136 HMGA1P17096 107 aaKnown RBP15.87■□□□□ 0.13
TRIM28-207ENST00000597136 FECHP22830 423 aa15.87■□□□□ 0.13
TRIM28-207ENST00000597136 PABPC1LQ4VXU2 614 aaKnown RBP15.87■□□□□ 0.13
TRIM28-207ENST00000597136 HGSNATQ68CP4 663 aa15.87■□□□□ 0.13
TRIM28-207ENST00000597136 TMC8Q8IU68 726 aa15.87■□□□□ 0.13
TRIM28-207ENST00000597136 ZMIZ2Q8NF64 920 aa15.87■□□□□ 0.13
TRIM28-207ENST00000597136 ST13P5Q8NFI4 369 aaPredicted RBP15.87■□□□□ 0.13
TRIM28-207ENST00000597136 PSMG2Q969U7 264 aa15.87■□□□□ 0.13
TRIM28-207ENST00000597136 MYADMQ96S97 322 aa15.87■□□□□ 0.13
TRIM28-207ENST00000597136 SMOQ99835 787 aa15.87■□□□□ 0.13
TRIM28-207ENST00000597136 ACP6Q9NPH0 428 aa15.87■□□□□ 0.13
TRIM28-207ENST00000597136 FAM50BQ9Y247 325 aa15.87■□□□□ 0.13
TRIM28-207ENST00000597136 SLC38A8A6NNN8 435 aa15.87■□□□□ 0.13
TRIM28-207ENST00000597136 MOSPD3O75425 235 aa15.87■□□□□ 0.13
TRIM28-207ENST00000597136 AP1G2O75843 785 aa15.87■□□□□ 0.13
TRIM28-207ENST00000597136 SERPING1P05155 500 aa15.87■□□□□ 0.13
TRIM28-207ENST00000597136 POU2F2P09086 479 aa15.87■□□□□ 0.13
TRIM28-207ENST00000597136 SKILP12757 684 aa15.87■□□□□ 0.13
TRIM28-207ENST00000597136 MYL4P12829 197 aa15.87■□□□□ 0.13
TRIM28-207ENST00000597136 SSTR3P32745 418 aaPredicted RBP15.87■□□□□ 0.13
TRIM28-207ENST00000597136 PRKCIP41743 596 aa15.87■□□□□ 0.13
TRIM28-207ENST00000597136 BPIFB4P59827 614 aa15.87■□□□□ 0.13
TRIM28-207ENST00000597136 RPL10AP62906 217 aaKnown RBP15.87■□□□□ 0.13
TRIM28-207ENST00000597136 CDK17Q00537 523 aa15.87■□□□□ 0.13
TRIM28-207ENST00000597136 ZP2Q05996 745 aa15.87■□□□□ 0.13
TRIM28-207ENST00000597136 KLHL30Q0D2K2 578 aa15.87■□□□□ 0.13
TRIM28-207ENST00000597136 VSTM1Q6UX27 236 aa15.87■□□□□ 0.13
TRIM28-207ENST00000597136 SLC47A2Q86VL8 602 aa15.87■□□□□ 0.13
TRIM28-207ENST00000597136 TMEM139Q8IV31 216 aa15.87■□□□□ 0.13
TRIM28-207ENST00000597136 ELMOD1Q8N336 334 aa15.87■□□□□ 0.13
TRIM28-207ENST00000597136 ADAMTS19Q8TE59 1207 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms