RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 PLCB2Q00722 1185 aa13.88□□□□□ -0.19
USE1-207ENST00000596136 TTI2Q6NXR4 508 aa13.88□□□□□ -0.19
USE1-207ENST00000596136 CLEC17AQ6ZS10 378 aa13.88□□□□□ -0.19
USE1-207ENST00000596136 FILIP1Q7Z7B0 1213 aa13.88□□□□□ -0.19
USE1-207ENST00000596136 GPIHBP1Q8IV16 184 aa13.88□□□□□ -0.19
USE1-207ENST00000596136 YAF2Q8IY57 180 aa13.88□□□□□ -0.19
USE1-207ENST00000596136 FUKQ8N0W3 1084 aa13.88□□□□□ -0.19
USE1-207ENST00000596136 FBXL13Q8NEE6 735 aa13.88□□□□□ -0.19
USE1-207ENST00000596136 SEMA4DQ92854 862 aa13.88□□□□□ -0.19
USE1-207ENST00000596136 MSANTD3Q96H12 275 aa13.88□□□□□ -0.19
USE1-207ENST00000596136 CEP63Q96MT8 703 aa13.88□□□□□ -0.19
USE1-207ENST00000596136 DUSP9Q99956 384 aaKnown RBP13.88□□□□□ -0.19
USE1-207ENST00000596136 IMPG2Q9BZV3 1241 aa13.88□□□□□ -0.19
USE1-207ENST00000596136 NIF3L1Q9GZT8 377 aa13.88□□□□□ -0.19
USE1-207ENST00000596136 RAB20Q9NX57 234 aa13.88□□□□□ -0.19
USE1-207ENST00000596136 IL37Q9NZH6 218 aa13.88□□□□□ -0.19
USE1-207ENST00000596136 GCNT4Q9P109 453 aa13.88□□□□□ -0.19
USE1-207ENST00000596136 DMDP11532 3685 aa13.88□□□□□ -0.19
USE1-207ENST00000596136 MYO15AQ9UKN7 3530 aa13.87□□□□□ -0.19
USE1-207ENST00000596136 VPS13AQ96RL7 3174 aa13.87□□□□□ -0.19
USE1-207ENST00000596136 H0Y858 1186 aa13.87□□□□□ -0.19
USE1-207ENST00000596136 TNFRSF10BO14763 440 aa13.87□□□□□ -0.19
USE1-207ENST00000596136 PMM2O15305 246 aa13.87□□□□□ -0.19
USE1-207ENST00000596136 TCF3P15923 654 aa13.87□□□□□ -0.19
USE1-207ENST00000596136 CD72P21854 359 aa13.87□□□□□ -0.19
USE1-207ENST00000596136 RPS9P46781 194 aaKnown RBP13.87□□□□□ -0.19
USE1-207ENST00000596136 ISM2Q6H9L7 571 aa13.87□□□□□ -0.19
USE1-207ENST00000596136 C1orf228Q6PIY5 440 aa13.87□□□□□ -0.19
USE1-207ENST00000596136 FRMD5Q7Z6J6 570 aa13.87□□□□□ -0.19
USE1-207ENST00000596136 ACOT1Q86TX2 421 aa13.87□□□□□ -0.19
USE1-207ENST00000596136 FAM35AQ86V20 835 aa13.87□□□□□ -0.19
USE1-207ENST00000596136 WHAMMQ8TF30 809 aa13.87□□□□□ -0.19
USE1-207ENST00000596136 SLC35C1Q96A29 364 aa13.87□□□□□ -0.19
USE1-207ENST00000596136 SLC22A12Q96S37 553 aa13.87□□□□□ -0.19
USE1-207ENST00000596136 FAM83CQ9BQN1 747 aa13.87□□□□□ -0.19
USE1-207ENST00000596136 SMG9Q9H0W8 520 aaKnown RBP13.87□□□□□ -0.19
USE1-207ENST00000596136 C8orf33Q9H7E9 229 aaPredicted RBP13.87□□□□□ -0.19
USE1-207ENST00000596136 METTL14Q9HCE5 456 aaKnown RBP13.87□□□□□ -0.19
USE1-207ENST00000596136 CSNK1G1Q9HCP0 422 aa13.87□□□□□ -0.19
USE1-207ENST00000596136 HMGXB4Q9UGU5 601 aa13.87□□□□□ -0.19
USE1-207ENST00000596136 ARMCX3Q9UH62 379 aaPredicted RBP13.87□□□□□ -0.19
USE1-207ENST00000596136 CCL26Q9Y258 94 aa13.87□□□□□ -0.19
USE1-207ENST00000596136 MRPS17Q9Y2R5 130 aaKnown RBP13.87□□□□□ -0.19
USE1-207ENST00000596136 PIAS3Q9Y6X2 628 aa13.87□□□□□ -0.19
USE1-207ENST00000596136 ATP8B3O60423 1300 aa13.87□□□□□ -0.19
USE1-207ENST00000596136 FAM92AA1XBS5 289 aa13.86□□□□□ -0.19
USE1-207ENST00000596136 ZNF840PA6NDX5 716 aa13.86□□□□□ -0.19
USE1-207ENST00000596136 PROB1E7EW31 1015 aa13.86□□□□□ -0.19
USE1-207ENST00000596136 NCAM2O15394 837 aa13.86□□□□□ -0.19
USE1-207ENST00000596136 CILPO75339 1184 aa13.86□□□□□ -0.19
USE1-207ENST00000596136 USP17L7P0C7H9 530 aa13.86□□□□□ -0.19
USE1-207ENST00000596136 TARSP26639 723 aaKnown RBP13.86□□□□□ -0.19
USE1-207ENST00000596136 ANP32AP39687 249 aaKnown RBP13.86□□□□□ -0.19
USE1-207ENST00000596136 UBXN2BQ14CS0 331 aa13.86□□□□□ -0.19
USE1-207ENST00000596136 ANGPT1Q15389 498 aa13.86□□□□□ -0.19
USE1-207ENST00000596136 CBWD6Q4V339 395 aa13.86□□□□□ -0.19
USE1-207ENST00000596136 CBWD3Q5JTY5 395 aa13.86□□□□□ -0.19
USE1-207ENST00000596136 CBWD5Q5RIA9 395 aa13.86□□□□□ -0.19
USE1-207ENST00000596136 MAMSTRQ6ZN01 415 aa13.86□□□□□ -0.19
USE1-207ENST00000596136 NUP93Q8N1F7 819 aa13.86□□□□□ -0.19
USE1-207ENST00000596136 TTC39CQ8N584 583 aa13.86□□□□□ -0.19
USE1-207ENST00000596136 TRIML1Q8N9V2 468 aa13.86□□□□□ -0.19
USE1-207ENST00000596136 RIN3Q8TB24 985 aa13.86□□□□□ -0.19
USE1-207ENST00000596136 OVCA2Q8WZ82 227 aa13.86□□□□□ -0.19
USE1-207ENST00000596136 SMARCD1Q96GM5 515 aa13.86□□□□□ -0.19
USE1-207ENST00000596136 TWNKQ96RR1 684 aa13.86□□□□□ -0.19
USE1-207ENST00000596136 CYP2S1Q96SQ9 504 aa13.86□□□□□ -0.19
USE1-207ENST00000596136 KCNK16Q96T55 309 aa13.86□□□□□ -0.19
USE1-207ENST00000596136 HNRNPABQ99729 332 aaKnown RBP13.86□□□□□ -0.19
USE1-207ENST00000596136 MMRN2Q9H8L6 949 aa13.86□□□□□ -0.19
USE1-207ENST00000596136 THG1LQ9NWX6 298 aaKnown RBP13.86□□□□□ -0.19
USE1-207ENST00000596136 COMMD8Q9NX08 183 aa13.86□□□□□ -0.19
USE1-207ENST00000596136 TRPM5Q9NZQ8 1165 aa13.86□□□□□ -0.19
USE1-207ENST00000596136 KIAA1468Q9P260 1216 aa13.86□□□□□ -0.19
USE1-207ENST00000596136 USP34Q70CQ2 3546 aa13.86□□□□□ -0.19
USE1-207ENST00000596136 TRAV19A0A0A6YYK7 116 aa13.85□□□□□ -0.19
USE1-207ENST00000596136 C2orf78A6NCI8 922 aa13.85□□□□□ -0.19
USE1-207ENST00000596136 CLSTN1O94985 981 aa13.85□□□□□ -0.19
USE1-207ENST00000596136 RTN3O95197 1032 aaPredicted RBP13.85□□□□□ -0.19
USE1-207ENST00000596136 OLFM2O95897 454 aa13.85□□□□□ -0.19
USE1-207ENST00000596136 NBL1P41271 181 aa13.85□□□□□ -0.19
USE1-207ENST00000596136 PDE6CP51160 858 aa13.85□□□□□ -0.19
USE1-207ENST00000596136 MARSP56192 900 aaKnown RBP13.85□□□□□ -0.19
USE1-207ENST00000596136 TAF10Q12962 218 aa13.85□□□□□ -0.19
USE1-207ENST00000596136 ZNF77Q15935 545 aa13.85□□□□□ -0.19
USE1-207ENST00000596136 SNX30Q5VWJ9 437 aa13.85□□□□□ -0.19
USE1-207ENST00000596136 RALGPS2Q86X27 583 aaPredicted RBP13.85□□□□□ -0.19
USE1-207ENST00000596136 C1orf210Q8IVY1 113 aa13.85□□□□□ -0.19
USE1-207ENST00000596136 KIAA1958Q8N8K9 716 aa13.85□□□□□ -0.19
USE1-207ENST00000596136 ARL14EPQ8N8R7 260 aaPredicted RBP13.85□□□□□ -0.19
USE1-207ENST00000596136 C12orf29Q8N999 325 aa13.85□□□□□ -0.19
USE1-207ENST00000596136 CCDC150Q8NCX0 1101 aa13.85□□□□□ -0.19
USE1-207ENST00000596136 ZMIZ2Q8NF64 920 aa13.85□□□□□ -0.19
USE1-207ENST00000596136 SLC2A14Q8TDB8 520 aa13.85□□□□□ -0.19
USE1-207ENST00000596136 CSGALNACT1Q8TDX6 532 aa13.85□□□□□ -0.19
USE1-207ENST00000596136 NELFBQ8WX92 580 aa13.85□□□□□ -0.19
USE1-207ENST00000596136 FAM3CQ92520 227 aa13.85□□□□□ -0.19
USE1-207ENST00000596136 ATOH1Q92858 354 aaPredicted RBP13.85□□□□□ -0.19
USE1-207ENST00000596136 ZFYVE19Q96K21 471 aa13.85□□□□□ -0.19
USE1-207ENST00000596136 PHOX2BQ99453 314 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms