RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 PPP1R26Q5T8A7 1209 aaPredicted RBP11.83□□□□□ -0.52
VRK3-210ENST00000596121 GJB7Q6PEY0 223 aa11.83□□□□□ -0.52
VRK3-210ENST00000596121 CLEC20AQ6ZU45 233 aa11.83□□□□□ -0.52
VRK3-210ENST00000596121 DENND5BQ6ZUT9 1274 aa11.83□□□□□ -0.52
VRK3-210ENST00000596121 GPRIN1Q7Z2K8 1008 aa11.83□□□□□ -0.52
VRK3-210ENST00000596121 BMP8AQ7Z5Y6 402 aa11.83□□□□□ -0.52
VRK3-210ENST00000596121 MON1AQ86VX9 555 aa11.83□□□□□ -0.52
VRK3-210ENST00000596121 MAB21L3Q8N8X9 362 aa11.83□□□□□ -0.52
VRK3-210ENST00000596121 PBXIP1Q96AQ6 731 aa11.83□□□□□ -0.52
VRK3-210ENST00000596121 TMEM176AQ96HP8 235 aa11.83□□□□□ -0.52
VRK3-210ENST00000596121 HEXIM2Q96MH2 286 aaKnown RBP11.83□□□□□ -0.52
VRK3-210ENST00000596121 CRACR2AQ9BSW2 395 aa11.83□□□□□ -0.52
VRK3-210ENST00000596121 GPR88Q9GZN0 384 aa11.83□□□□□ -0.52
VRK3-210ENST00000596121 SLITRK6Q9H5Y7 841 aa11.83□□□□□ -0.52
VRK3-210ENST00000596121 ZFP14Q9HCL3 533 aa11.83□□□□□ -0.52
VRK3-210ENST00000596121 CSNK1G1Q9HCP0 422 aa11.83□□□□□ -0.52
VRK3-210ENST00000596121 SLC2A4RGQ9NR83 387 aa11.83□□□□□ -0.52
VRK3-210ENST00000596121 IL37Q9NZH6 218 aa11.83□□□□□ -0.52
VRK3-210ENST00000596121 GCNT4Q9P109 453 aa11.83□□□□□ -0.52
VRK3-210ENST00000596121 CCL26Q9Y258 94 aa11.83□□□□□ -0.52
VRK3-210ENST00000596121 SHISA7A6NL88 538 aa11.82□□□□□ -0.52
VRK3-210ENST00000596121 ANXA13P27216 316 aa11.82□□□□□ -0.52
VRK3-210ENST00000596121 WEE1P30291 646 aa11.82□□□□□ -0.52
VRK3-210ENST00000596121 TAF10Q12962 218 aa11.82□□□□□ -0.52
VRK3-210ENST00000596121 ARHGAP15Q53QZ3 475 aa11.82□□□□□ -0.52
VRK3-210ENST00000596121 CT47A1Q5JQC4 288 aaPredicted RBP11.82□□□□□ -0.52
VRK3-210ENST00000596121 CMTM8Q8IZV2 173 aa11.82□□□□□ -0.52
VRK3-210ENST00000596121 NUP93Q8N1F7 819 aa11.82□□□□□ -0.52
VRK3-210ENST00000596121 ENOX1Q8TC92 643 aaKnown RBP11.82□□□□□ -0.52
VRK3-210ENST00000596121 TFAP2BQ92481 460 aa11.82□□□□□ -0.52
VRK3-210ENST00000596121 USP13Q92995 863 aaPredicted RBP11.82□□□□□ -0.52
VRK3-210ENST00000596121 SMARCD1Q96GM5 515 aa11.82□□□□□ -0.52
VRK3-210ENST00000596121 CEP295NLQ96MC4 621 aa11.82□□□□□ -0.52
VRK3-210ENST00000596121 NT5C1BQ96P26 610 aa11.82□□□□□ -0.52
VRK3-210ENST00000596121 HSD3B7Q9H2F3 369 aa11.82□□□□□ -0.52
VRK3-210ENST00000596121 SIX2Q9NPC8 291 aa11.82□□□□□ -0.52
VRK3-210ENST00000596121 DMAP1Q9NPF5 467 aaPredicted RBP11.82□□□□□ -0.52
VRK3-210ENST00000596121 AJAP1Q9UKB5 411 aaPredicted RBP11.82□□□□□ -0.52
VRK3-210ENST00000596121 CA14Q9ULX7 337 aa11.82□□□□□ -0.52
VRK3-210ENST00000596121 NFE2L3Q9Y4A8 694 aa11.82□□□□□ -0.52
VRK3-210ENST00000596121 OBSL1O75147 1896 aa11.82□□□□□ -0.52
VRK3-210ENST00000596121 DENND4CQ5VZ89 1909 aa11.82□□□□□ -0.52
VRK3-210ENST00000596121 FAM92AA1XBS5 289 aa11.81□□□□□ -0.52
VRK3-210ENST00000596121 ZNF840PA6NDX5 716 aa11.81□□□□□ -0.52
VRK3-210ENST00000596121 TULP2O00295 520 aa11.81□□□□□ -0.52
VRK3-210ENST00000596121 ARNTLO00327 626 aa11.81□□□□□ -0.52
VRK3-210ENST00000596121 PI15O43692 258 aa11.81□□□□□ -0.52
VRK3-210ENST00000596121 FAM200BP0CF97 657 aa11.81□□□□□ -0.52
VRK3-210ENST00000596121 PON1P27169 355 aa11.81□□□□□ -0.52
VRK3-210ENST00000596121 MTIF2P46199 727 aaKnown RBP11.81□□□□□ -0.52
VRK3-210ENST00000596121 ZNF132P52740 706 aa11.81□□□□□ -0.52
VRK3-210ENST00000596121 SLC5A3P53794 718 aa11.81□□□□□ -0.52
VRK3-210ENST00000596121 VCPP55072 806 aaKnown RBP11.81□□□□□ -0.52
VRK3-210ENST00000596121 ZXDBP98169 803 aa11.81□□□□□ -0.52
VRK3-210ENST00000596121 IFRD2Q12894 506 aaPredicted RBP11.81□□□□□ -0.52
VRK3-210ENST00000596121 NCAPHQ15003 741 aa11.81□□□□□ -0.52
VRK3-210ENST00000596121 TPD52L1Q16890 204 aaPredicted RBP11.81□□□□□ -0.52
VRK3-210ENST00000596121 CDKAL1Q5VV42 579 aa11.81□□□□□ -0.52
VRK3-210ENST00000596121 ARHGAP17Q68EM7 881 aa11.81□□□□□ -0.52
VRK3-210ENST00000596121 CAVIN1Q6NZI2 390 aaKnown RBP11.81□□□□□ -0.52
VRK3-210ENST00000596121 SASS6Q6UVJ0 657 aa11.81□□□□□ -0.52
VRK3-210ENST00000596121 TTC30AQ86WT1 665 aa11.81□□□□□ -0.52
VRK3-210ENST00000596121 MFSD6LQ8IWD5 586 aa11.81□□□□□ -0.52
VRK3-210ENST00000596121 SIX5Q8N196 739 aa11.81□□□□□ -0.52
VRK3-210ENST00000596121 PPM1KQ8N3J5 372 aa11.81□□□□□ -0.52
VRK3-210ENST00000596121 ARL14EPQ8N8R7 260 aaPredicted RBP11.81□□□□□ -0.52
VRK3-210ENST00000596121 MRPS31Q92665 395 aaKnown RBP11.81□□□□□ -0.52
VRK3-210ENST00000596121 JAKMIP2Q96AA8 810 aa11.81□□□□□ -0.52
VRK3-210ENST00000596121 RNF38Q9H0F5 515 aa11.81□□□□□ -0.52
VRK3-210ENST00000596121 FANCLQ9NW38 375 aa11.81□□□□□ -0.52
VRK3-210ENST00000596121 UXTQ9UBK9 157 aaPredicted RBP11.81□□□□□ -0.52
VRK3-210ENST00000596121 WNT16Q9UBV4 365 aa11.81□□□□□ -0.52
VRK3-210ENST00000596121 CHORDC1Q9UHD1 332 aaPredicted RBP11.81□□□□□ -0.52
VRK3-210ENST00000596121 DACH1Q9UI36 760 aa11.81□□□□□ -0.52
VRK3-210ENST00000596121 ZNF318Q5VUA4 2279 aa11.8□□□□□ -0.52
VRK3-210ENST00000596121 ANAPC1Q9H1A4 1944 aa11.8□□□□□ -0.52
VRK3-210ENST00000596121 ZNF638Q14966 1978 aaKnown RBP11.8□□□□□ -0.52
VRK3-210ENST00000596121 KCNJ18B7U540 433 aa11.8□□□□□ -0.52
VRK3-210ENST00000596121 ZDHHC11BP0C7U3 371 aa11.8□□□□□ -0.52
VRK3-210ENST00000596121 PSMC3P17980 439 aa11.8□□□□□ -0.52
VRK3-210ENST00000596121 TBXAS1P24557 533 aaPredicted RBP11.8□□□□□ -0.52
VRK3-210ENST00000596121 YWHAQP27348 245 aa11.8□□□□□ -0.52
VRK3-210ENST00000596121 GDI1P31150 447 aa11.8□□□□□ -0.52
VRK3-210ENST00000596121 GCNT1Q02742 428 aa11.8□□□□□ -0.52
VRK3-210ENST00000596121 TYRO3Q06418 890 aa11.8□□□□□ -0.52
VRK3-210ENST00000596121 FCHO2Q0JRZ9 810 aa11.8□□□□□ -0.52
VRK3-210ENST00000596121 KCNMA1Q12791 1236 aa11.8□□□□□ -0.52
VRK3-210ENST00000596121 KCNJ12Q14500 433 aa11.8□□□□□ -0.52
VRK3-210ENST00000596121 STX1AQ16623 288 aa11.8□□□□□ -0.52
VRK3-210ENST00000596121 MAN2A1Q16706 1144 aa11.8□□□□□ -0.52
VRK3-210ENST00000596121 VWA3BQ502W6 1294 aa11.8□□□□□ -0.52
VRK3-210ENST00000596121 SLC44A4Q53GD3 710 aa11.8□□□□□ -0.52
VRK3-210ENST00000596121 TCP11X2Q5H9J9 407 aa11.8□□□□□ -0.52
VRK3-210ENST00000596121 CWF19L1Q69YN2 538 aaKnown RBP11.8□□□□□ -0.52
VRK3-210ENST00000596121 TRIM65Q6PJ69 517 aa11.8□□□□□ -0.52
VRK3-210ENST00000596121 TMEM270Q6UE05 265 aa11.8□□□□□ -0.52
VRK3-210ENST00000596121 FBXL6Q8N531 539 aa11.8□□□□□ -0.52
VRK3-210ENST00000596121 TTC39CQ8N584 583 aa11.8□□□□□ -0.52
VRK3-210ENST00000596121 ZFYVE19Q96K21 471 aa11.8□□□□□ -0.52
VRK3-210ENST00000596121 GCNAQ96QF7 691 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms