RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 B3GNT5Q9BYG0 378 aa13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 MIS12Q9H081 205 aa13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 SYNCQ9H7C4 482 aa13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 CRTAC1Q9NQ79 661 aa13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 FAM86C1Q9NVL1 165 aa13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 SPG21Q9NZD8 308 aa13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 CTTNBP2NLQ9P2B4 639 aa13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 GTF3C4Q9UKN8 822 aa13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 PCDHB12Q9Y5F1 795 aa13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 LCHNA4D1U4 455 aa13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 OR6C75A6NL08 312 aa13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 H3BQ06 376 aaPredicted RBP13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 CYP1A2P05177 515 aa13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 MMP8P22894 467 aa13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 CASQ1P31415 396 aa13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 BCAT1P54687 386 aa13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 HTRA4P83105 476 aaPredicted RBP13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 BST2Q10589 180 aaKnown RBP13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 USP41Q3LFD5 358 aa13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 PUS10Q3MIT2 529 aaKnown RBP13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 CTXN3Q4LDR2 81 aa13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 KIAA1841Q6NSI8 718 aa13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 FAM171BQ6P995 826 aa13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 SYT10Q6XYQ8 523 aa13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 PHLDB2Q86SQ0 1253 aa13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 SLC39A11Q8N1S5 342 aa13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 COLGALT1Q8NBJ5 622 aa13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 RFFLQ8WZ73 363 aa13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 C18orf8Q96DM3 657 aa13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 ARHGEF26Q96DR7 871 aa13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 TMEM169Q96HH4 297 aa13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 ALS2CR12Q96Q35 445 aa13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 RAD9AQ99638 391 aa13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 TTPALQ9BTX7 342 aa13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 DUSP16Q9BY84 665 aa13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 OXCT2Q9BYC2 517 aaPredicted RBP13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 IRX2Q9BZI1 471 aaPredicted RBP13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 RC3H2Q9HBD1 1191 aaKnown RBP13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 MRPL47Q9HD33 250 aaKnown RBP13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 RRAGDQ9NQL2 400 aaPredicted RBP13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 ST7Q9NRC1 585 aa13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 DNAI1Q9UI46 699 aa13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 PTPRSQ13332 1948 aa13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 TECTAO75443 2155 aa13.79□□□□□ -0.2
SHKBP1-209ENST00000595803 CLDN5O00501 218 aa13.78□□□□□ -0.2
SHKBP1-209ENST00000595803 FAM200BP0CF97 657 aa13.78□□□□□ -0.2
SHKBP1-209ENST00000595803 RRM1P23921 792 aa13.78□□□□□ -0.2
SHKBP1-209ENST00000595803 PLCB3Q01970 1234 aa13.78□□□□□ -0.2
SHKBP1-209ENST00000595803 KRT17Q04695 432 aa13.78□□□□□ -0.2
SHKBP1-209ENST00000595803 PDE4CQ08493 712 aa13.78□□□□□ -0.2
SHKBP1-209ENST00000595803 MRPL58Q14197 206 aaKnown RBP13.78□□□□□ -0.2
SHKBP1-209ENST00000595803 ZNF268Q14587 947 aaPredicted RBP13.78□□□□□ -0.2
SHKBP1-209ENST00000595803 TCEAL1Q15170 157 aa13.78□□□□□ -0.2
SHKBP1-209ENST00000595803 PKDCCQ504Y2 493 aa13.78□□□□□ -0.2
SHKBP1-209ENST00000595803 ZNF280DQ6N043 979 aa13.78□□□□□ -0.2
SHKBP1-209ENST00000595803 ANKS3Q6ZW76 656 aa13.78□□□□□ -0.2
SHKBP1-209ENST00000595803 MON1BQ7L1V2 547 aa13.78□□□□□ -0.2
SHKBP1-209ENST00000595803 TAS1R1Q7RTX1 841 aa13.78□□□□□ -0.2
SHKBP1-209ENST00000595803 ERMP1Q7Z2K6 904 aa13.78□□□□□ -0.2
SHKBP1-209ENST00000595803 TTC30AQ86WT1 665 aa13.78□□□□□ -0.2
SHKBP1-209ENST00000595803 SPATA2LQ8IUW3 424 aaPredicted RBP13.78□□□□□ -0.2
SHKBP1-209ENST00000595803 FUKQ8N0W3 1084 aa13.78□□□□□ -0.2
SHKBP1-209ENST00000595803 SLC35F6Q8N357 371 aa13.78□□□□□ -0.2
SHKBP1-209ENST00000595803 OR10T2Q8NGX3 314 aa13.78□□□□□ -0.2
SHKBP1-209ENST00000595803 IPO4Q8TEX9 1081 aaKnown RBP13.78□□□□□ -0.2
SHKBP1-209ENST00000595803 STK32AQ8WU08 396 aa13.78□□□□□ -0.2
SHKBP1-209ENST00000595803 BCL7CQ8WUZ0 217 aaPredicted RBP13.78□□□□□ -0.2
SHKBP1-209ENST00000595803 SLC35F5Q8WV83 523 aa13.78□□□□□ -0.2
SHKBP1-209ENST00000595803 ZCWPW1Q9H0M4 648 aa13.78□□□□□ -0.2
SHKBP1-209ENST00000595803 AVENQ9NQS1 362 aaPredicted RBP13.78□□□□□ -0.2
SHKBP1-209ENST00000595803 WDR35Q9P2L0 1181 aa13.78□□□□□ -0.2
SHKBP1-209ENST00000595803 UVRAGQ9P2Y5 699 aa13.78□□□□□ -0.2
SHKBP1-209ENST00000595803 SALL4Q9UJQ4 1053 aa13.78□□□□□ -0.2
SHKBP1-209ENST00000595803 MTUS1Q9ULD2 1270 aa13.78□□□□□ -0.2
SHKBP1-209ENST00000595803 STRIP2Q9ULQ0 834 aa13.78□□□□□ -0.2
SHKBP1-209ENST00000595803 NCANO14594 1321 aa13.78□□□□□ -0.2
SHKBP1-209ENST00000595803 C19orf67A6NJJ6 358 aa13.77□□□□□ -0.21
SHKBP1-209ENST00000595803 IRS1P35568 1242 aa13.77□□□□□ -0.21
SHKBP1-209ENST00000595803 PPM1AP35813 382 aa13.77□□□□□ -0.21
SHKBP1-209ENST00000595803 ACADSBP45954 432 aa13.77□□□□□ -0.21
SHKBP1-209ENST00000595803 RGS7P49802 495 aa13.77□□□□□ -0.21
SHKBP1-209ENST00000595803 PTP4A2Q12974 167 aa13.77□□□□□ -0.21
SHKBP1-209ENST00000595803 PDCLQ13371 301 aa13.77□□□□□ -0.21
SHKBP1-209ENST00000595803 C2CD6Q53TS8 623 aa13.77□□□□□ -0.21
SHKBP1-209ENST00000595803 C4orf50Q6ZRC1 276 aa13.77□□□□□ -0.21
SHKBP1-209ENST00000595803 PAQR9Q6ZVX9 377 aa13.77□□□□□ -0.21
SHKBP1-209ENST00000595803 LRRTM3Q86VH5 581 aa13.77□□□□□ -0.21
SHKBP1-209ENST00000595803 TMEM173Q86WV6 379 aaPredicted RBP13.77□□□□□ -0.21
SHKBP1-209ENST00000595803 TRIM58Q8NG06 486 aa13.77□□□□□ -0.21
SHKBP1-209ENST00000595803 KIF18AQ8NI77 898 aa13.77□□□□□ -0.21
SHKBP1-209ENST00000595803 MYLPFQ96A32 169 aa13.77□□□□□ -0.21
SHKBP1-209ENST00000595803 PCED1BQ96HM7 432 aa13.77□□□□□ -0.21
SHKBP1-209ENST00000595803 HSFY1Q96LI6 401 aa13.77□□□□□ -0.21
SHKBP1-209ENST00000595803 TMEM209Q96SK2 561 aa13.77□□□□□ -0.21
SHKBP1-209ENST00000595803 PRRX2Q99811 253 aa13.77□□□□□ -0.21
SHKBP1-209ENST00000595803 SELENOOQ9BVL4 669 aa13.77□□□□□ -0.21
SHKBP1-209ENST00000595803 NUP85Q9BW27 656 aa13.77□□□□□ -0.21
SHKBP1-209ENST00000595803 OSGEPQ9NPF4 335 aa13.77□□□□□ -0.21
SHKBP1-209ENST00000595803 PARVAQ9NVD7 372 aa13.77□□□□□ -0.21
SHKBP1-209ENST00000595803 PRKAG3Q9UGI9 489 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms