RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 RNF19AQ9NV58 838 aa17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 DPP3Q9NY33 737 aa17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 IP6K2Q9UHH9 426 aa17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 CYTH4Q9UIA0 394 aa17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 HES2Q9Y543 173 aa17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 CEP350Q5VT06 3117 aa17.92■□□□□ 0.46
SHKBP1-205ENST00000594973 RRN3P2A6NIE6 340 aa17.91■□□□□ 0.46
SHKBP1-205ENST00000594973 F8VP50 259 aa17.91■□□□□ 0.46
SHKBP1-205ENST00000594973 PODXLO00592 558 aa17.91■□□□□ 0.46
SHKBP1-205ENST00000594973 PSTPIP1O43586 416 aa17.91■□□□□ 0.46
SHKBP1-205ENST00000594973 CCNB1P14635 433 aa17.91■□□□□ 0.46
SHKBP1-205ENST00000594973 ZNF252P-AS1Q0IIN9 211 aa17.91■□□□□ 0.46
SHKBP1-205ENST00000594973 SLC4A11Q8NBS3 891 aa17.91■□□□□ 0.46
SHKBP1-205ENST00000594973 RNF25Q96BH1 459 aaPredicted RBP17.91■□□□□ 0.46
SHKBP1-205ENST00000594973 DTNBP1Q96EV8 351 aa17.91■□□□□ 0.46
SHKBP1-205ENST00000594973 GORASP1Q9BQQ3 440 aa17.91■□□□□ 0.46
SHKBP1-205ENST00000594973 TMEM109Q9BVC6 243 aa17.91■□□□□ 0.46
SHKBP1-205ENST00000594973 ELOVL4Q9GZR5 314 aa17.91■□□□□ 0.46
SHKBP1-205ENST00000594973 PABPC3Q9H361 631 aaKnown RBP17.91■□□□□ 0.46
SHKBP1-205ENST00000594973 RXFP1Q9HBX9 757 aa17.91■□□□□ 0.46
SHKBP1-205ENST00000594973 BRCA2P51587 3418 aa17.91■□□□□ 0.46
SHKBP1-205ENST00000594973 A8MUI8 341 aa17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 PI4K2BG5E9Z4 385 aa17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 RNF8O76064 485 aa17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 F2P00734 622 aa17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 CYP2C9P11712 490 aa17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 HOXA11P31270 313 aaPredicted RBP17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 BEX3Q00994 111 aa17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 OGDHQ02218 1023 aa17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 HIC1Q14526 733 aa17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 PTPN20Q4JDL3 420 aa17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 ZDHHC24Q6UX98 284 aa17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 ARHGAP22Q7Z5H3 698 aa17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 RASAL3Q86YV0 1011 aa17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 EIF2AQ9BY44 585 aaKnown RBP17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 GCOM2Q9BZD3 368 aaPredicted RBP17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 LRRC19Q9H756 370 aa17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 SNTG2Q9NY99 539 aa17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 GRHL1Q9NZI5 618 aa17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 R3HDM2Q9Y2K5 976 aaKnown RBP17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 NRCAMQ92823 1304 aa17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 PDLIM1O00151 329 aa17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 RGS16O15492 202 aaPredicted RBP17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 MED7O43513 233 aa17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 CILPO75339 1184 aa17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 GPR32O75388 356 aa17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 ECEL1O95672 775 aa17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 ZNF865P0CJ78 1059 aaPredicted RBP17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 PTPN11Q06124 597 aaPredicted RBP17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 KYAT1Q16773 422 aa17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 NUGGCQ68CJ6 796 aa17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 ANKS1BQ7Z6G8 1248 aa17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 C12orf50Q8NA57 414 aaPredicted RBP17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 B4GALNT2Q8NHY0 566 aa17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 ACSF2Q96CM8 615 aaPredicted RBP17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 TMEM176AQ96HP8 235 aa17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 SYNCQ9H7C4 482 aa17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 LRRC4CQ9HCJ2 640 aa17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 STK38LQ9Y2H1 464 aa17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 ARL2BPQ9Y2Y0 163 aa17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 ZSWIM8A7E2V4 1837 aa17.9■□□□□ 0.46
SHKBP1-205ENST00000594973 PASKQ96RG2 1323 aa17.89■□□□□ 0.46
SHKBP1-205ENST00000594973 TCRBV5S1A1TA0A578 114 aa17.89■□□□□ 0.46
SHKBP1-205ENST00000594973 ITGBL1O95965 494 aaPredicted RBP17.89■□□□□ 0.46
SHKBP1-205ENST00000594973 P4HA1P13674 534 aa17.89■□□□□ 0.46
SHKBP1-205ENST00000594973 CALB2P22676 271 aa17.89■□□□□ 0.46
SHKBP1-205ENST00000594973 ATICP31939 592 aa17.89■□□□□ 0.46
SHKBP1-205ENST00000594973 CDH5P33151 784 aaPredicted RBP17.89■□□□□ 0.46
SHKBP1-205ENST00000594973 ZNF200P98182 395 aaPredicted RBP17.89■□□□□ 0.46
SHKBP1-205ENST00000594973 DYNC1I2Q13409 638 aaKnown RBP17.89■□□□□ 0.46
SHKBP1-205ENST00000594973 CUL3Q13618 768 aa17.89■□□□□ 0.46
SHKBP1-205ENST00000594973 MFSD10Q14728 455 aa17.89■□□□□ 0.46
SHKBP1-205ENST00000594973 KATNAL2Q8IYT4 538 aa17.89■□□□□ 0.46
SHKBP1-205ENST00000594973 HEXIM2Q96MH2 286 aaKnown RBP17.89■□□□□ 0.46
SHKBP1-205ENST00000594973 EPAS1Q99814 870 aa17.89■□□□□ 0.46
SHKBP1-205ENST00000594973 RNPEPL1Q9HAU8 725 aa17.89■□□□□ 0.46
SHKBP1-205ENST00000594973 ITGA11Q9UKX5 1188 aa17.89■□□□□ 0.46
SHKBP1-205ENST00000594973 C2CD2Q9Y426 696 aa17.89■□□□□ 0.46
SHKBP1-205ENST00000594973 MYL3P08590 195 aa17.89■□□□□ 0.45
SHKBP1-205ENST00000594973 ACADSP16219 412 aa17.89■□□□□ 0.45
SHKBP1-205ENST00000594973 GRM5P41594 1212 aa17.89■□□□□ 0.45
SHKBP1-205ENST00000594973 RBP5P82980 135 aa17.89■□□□□ 0.45
SHKBP1-205ENST00000594973 TRIP13Q15645 432 aaPredicted RBP17.89■□□□□ 0.45
SHKBP1-205ENST00000594973 PARP6Q2NL67 630 aa17.89■□□□□ 0.45
SHKBP1-205ENST00000594973 KAZNQ674X7 775 aa17.89■□□□□ 0.45
SHKBP1-205ENST00000594973 DENND2CQ68D51 928 aa17.89■□□□□ 0.45
SHKBP1-205ENST00000594973 DNAJB3Q8WWF6 145 aa17.89■□□□□ 0.45
SHKBP1-205ENST00000594973 CPXM1Q96SM3 734 aa17.89■□□□□ 0.45
SHKBP1-205ENST00000594973 OSBPL8Q9BZF1 889 aa17.89■□□□□ 0.45
SHKBP1-205ENST00000594973 EPB41L4BQ9H329 900 aa17.89■□□□□ 0.45
SHKBP1-205ENST00000594973 CHCHD3Q9NX63 227 aaKnown RBP17.89■□□□□ 0.45
SHKBP1-205ENST00000594973 MAN1A1P33908 653 aa17.88■□□□□ 0.45
SHKBP1-205ENST00000594973 PCK1P35558 622 aa17.88■□□□□ 0.45
SHKBP1-205ENST00000594973 PMS2P54278 862 aa17.88■□□□□ 0.45
SHKBP1-205ENST00000594973 DRG2P55039 364 aaKnown RBP17.88■□□□□ 0.45
SHKBP1-205ENST00000594973 KRT17Q04695 432 aa17.88■□□□□ 0.45
SHKBP1-205ENST00000594973 KLC1Q07866 573 aa17.88■□□□□ 0.45
SHKBP1-205ENST00000594973 CNGA2Q16280 664 aa17.88■□□□□ 0.45
SHKBP1-205ENST00000594973 GLRA4Q5JXX5 417 aa17.88■□□□□ 0.45
SHKBP1-205ENST00000594973 PPP1R15BQ5SWA1 713 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms