RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 ZNF197O14709 1029 aa20.8■□□□□ 0.92
LSM4-203ENST00000593829 CDK11BP21127 795 aaKnown RBP20.8■□□□□ 0.92
LSM4-203ENST00000593829 GBP2P32456 591 aaPredicted RBP20.8■□□□□ 0.92
LSM4-203ENST00000593829 GPR15P49685 360 aa20.8■□□□□ 0.92
LSM4-203ENST00000593829 EPHA5P54756 1037 aa20.8■□□□□ 0.92
LSM4-203ENST00000593829 UBASH3AP57075 661 aa20.8■□□□□ 0.92
LSM4-203ENST00000593829 KRT31Q15323 416 aa20.8■□□□□ 0.92
LSM4-203ENST00000593829 ZNF394Q53GI3 561 aa20.8■□□□□ 0.92
LSM4-203ENST00000593829 C12orf29Q8N999 325 aa20.8■□□□□ 0.92
LSM4-203ENST00000593829 MED10Q9BTT4 135 aa20.8■□□□□ 0.92
LSM4-203ENST00000593829 ZNF518BQ9C0D4 1074 aa20.8■□□□□ 0.92
LSM4-203ENST00000593829 MRPS23Q9Y3D9 190 aaKnown RBP20.8■□□□□ 0.92
LSM4-203ENST00000593829 CLDN5O00501 218 aa20.79■□□□□ 0.92
LSM4-203ENST00000593829 ARHGAP6O43182 974 aa20.79■□□□□ 0.92
LSM4-203ENST00000593829 SLC9A1P19634 815 aa20.79■□□□□ 0.92
LSM4-203ENST00000593829 SDHAF4Q5VUM1 108 aa20.79■□□□□ 0.92
LSM4-203ENST00000593829 PHLDB3Q6NSJ2 640 aa20.79■□□□□ 0.92
LSM4-203ENST00000593829 RRAGAQ7L523 313 aa20.79■□□□□ 0.92
LSM4-203ENST00000593829 ARHGEF19Q8IW93 802 aa20.79■□□□□ 0.92
LSM4-203ENST00000593829 PLCD3Q8N3E9 789 aa20.79■□□□□ 0.92
LSM4-203ENST00000593829 ITFG1Q8TB96 612 aa20.79■□□□□ 0.92
LSM4-203ENST00000593829 GPR152Q8TDT2 470 aa20.79■□□□□ 0.92
LSM4-203ENST00000593829 TMEM176AQ96HP8 235 aa20.79■□□□□ 0.92
LSM4-203ENST00000593829 COL25A1Q9BXS0 654 aaPredicted RBP20.79■□□□□ 0.92
LSM4-203ENST00000593829 FAM49BQ9NUQ9 324 aa20.79■□□□□ 0.92
LSM4-203ENST00000593829 CALCOCO1Q9P1Z2 691 aa20.79■□□□□ 0.92
LSM4-203ENST00000593829 TRIM66O15016 1216 aa20.78■□□□□ 0.92
LSM4-203ENST00000593829 MYL4P12829 197 aa20.78■□□□□ 0.92
LSM4-203ENST00000593829 CCDC130P13994 396 aa20.78■□□□□ 0.92
LSM4-203ENST00000593829 ZNF18P17022 549 aa20.78■□□□□ 0.92
LSM4-203ENST00000593829 PON1P27169 355 aa20.78■□□□□ 0.92
LSM4-203ENST00000593829 ANXA13P27216 316 aa20.78■□□□□ 0.92
LSM4-203ENST00000593829 RAD23BP54727 409 aa20.78■□□□□ 0.92
LSM4-203ENST00000593829 SLC5A9Q2M3M2 681 aa20.78■□□□□ 0.92
LSM4-203ENST00000593829 TMCO3Q6UWJ1 677 aa20.78■□□□□ 0.92
LSM4-203ENST00000593829 PAQR9Q6ZVX9 377 aa20.78■□□□□ 0.92
LSM4-203ENST00000593829 FUKQ8N0W3 1084 aa20.78■□□□□ 0.92
LSM4-203ENST00000593829 UBR7Q8N806 425 aa20.78■□□□□ 0.92
LSM4-203ENST00000593829 CEP295NLQ96MC4 621 aa20.78■□□□□ 0.92
LSM4-203ENST00000593829 HEXIM2Q96MH2 286 aaKnown RBP20.78■□□□□ 0.92
LSM4-203ENST00000593829 LRRC3Q9BY71 257 aa20.78■□□□□ 0.92
LSM4-203ENST00000593829 CD320Q9NPF0 282 aa20.78■□□□□ 0.92
LSM4-203ENST00000593829 CSH1P0DML2 217 aa20.78■□□□□ 0.92
LSM4-203ENST00000593829 CSH2P0DML3 217 aa20.78■□□□□ 0.92
LSM4-203ENST00000593829 PLA2G4AP47712 749 aa20.78■□□□□ 0.92
LSM4-203ENST00000593829 PRSS36Q5K4E3 855 aa20.78■□□□□ 0.92
LSM4-203ENST00000593829 FAM35AQ86V20 835 aa20.78■□□□□ 0.92
LSM4-203ENST00000593829 TMC8Q8IU68 726 aa20.78■□□□□ 0.92
LSM4-203ENST00000593829 ZDHHC14Q8IZN3 488 aa20.78■□□□□ 0.92
LSM4-203ENST00000593829 SLC4A11Q8NBS3 891 aa20.78■□□□□ 0.92
LSM4-203ENST00000593829 LRRN4CLQ8ND94 238 aa20.78■□□□□ 0.92
LSM4-203ENST00000593829 SLC2A14Q8TDB8 520 aa20.78■□□□□ 0.92
LSM4-203ENST00000593829 KAT5Q92993 513 aa20.78■□□□□ 0.92
LSM4-203ENST00000593829 SMARCD1Q96GM5 515 aa20.78■□□□□ 0.92
LSM4-203ENST00000593829 SPATA17Q96L03 361 aa20.78■□□□□ 0.92
LSM4-203ENST00000593829 C8orf48Q96LL4 319 aa20.78■□□□□ 0.92
LSM4-203ENST00000593829 FAM81BQ96LP2 452 aa20.78■□□□□ 0.92
LSM4-203ENST00000593829 MYADMQ96S97 322 aa20.78■□□□□ 0.92
LSM4-203ENST00000593829 UBXN6Q9BZV1 441 aa20.78■□□□□ 0.92
LSM4-203ENST00000593829 VPS16Q9H269 839 aa20.78■□□□□ 0.92
LSM4-203ENST00000593829 UBE2TQ9NPD8 197 aaPredicted RBP20.78■□□□□ 0.92
LSM4-203ENST00000593829 LIMA1Q9UHB6 759 aaKnown RBP20.78■□□□□ 0.92
LSM4-203ENST00000593829 ZFP37Q9Y6Q3 630 aaPredicted RBP20.78■□□□□ 0.92
LSM4-203ENST00000593829 MICAL2O94851 1124 aa20.77■□□□□ 0.92
LSM4-203ENST00000593829 FGF19O95750 216 aa20.77■□□□□ 0.92
LSM4-203ENST00000593829 TBX2Q13207 712 aaPredicted RBP20.77■□□□□ 0.92
LSM4-203ENST00000593829 ENOSF1Q7L5Y1 443 aa20.77■□□□□ 0.92
LSM4-203ENST00000593829 FGF13Q92913 245 aa20.77■□□□□ 0.92
LSM4-203ENST00000593829 JAKMIP2Q96AA8 810 aa20.77■□□□□ 0.92
LSM4-203ENST00000593829 TCEAL4Q96EI5 215 aa20.77■□□□□ 0.92
LSM4-203ENST00000593829 CYFIP2Q96F07 1278 aa20.77■□□□□ 0.92
LSM4-203ENST00000593829 HNRNPABQ99729 332 aaKnown RBP20.77■□□□□ 0.92
LSM4-203ENST00000593829 APEX2Q9UBZ4 518 aa20.77■□□□□ 0.92
LSM4-203ENST00000593829 CDH7Q9ULB5 785 aa20.77■□□□□ 0.92
LSM4-203ENST00000593829 PCDHB4Q9Y5E5 795 aa20.77■□□□□ 0.92
LSM4-203ENST00000593829 DOCK6Q96HP0 2047 aa20.77■□□□□ 0.92
LSM4-203ENST00000593829 F8VP50 259 aa20.76■□□□□ 0.91
LSM4-203ENST00000593829 ATP1A3P13637 1013 aa20.76■□□□□ 0.91
LSM4-203ENST00000593829 ACO1P21399 889 aaKnown RBP20.76■□□□□ 0.91
LSM4-203ENST00000593829 CCR2P41597 374 aa20.76■□□□□ 0.91
LSM4-203ENST00000593829 TMEM270Q6UE05 265 aa20.76■□□□□ 0.91
LSM4-203ENST00000593829 TMEM139Q8IV31 216 aa20.76■□□□□ 0.91
LSM4-203ENST00000593829 MNS1Q8NEH6 495 aa20.76■□□□□ 0.91
LSM4-203ENST00000593829 ING5Q8WYH8 240 aa20.76■□□□□ 0.91
LSM4-203ENST00000593829 KREMEN1Q96MU8 473 aa20.76■□□□□ 0.91
LSM4-203ENST00000593829 ZNF334Q9HCZ1 680 aaPredicted RBP20.76■□□□□ 0.91
LSM4-203ENST00000593829 EPS15L1Q9UBC2 864 aa20.76■□□□□ 0.91
LSM4-203ENST00000593829 NOTCH4Q99466 2003 aa20.76■□□□□ 0.91
LSM4-203ENST00000593829 SLC38A8A6NNN8 435 aa20.76■□□□□ 0.91
LSM4-203ENST00000593829 AP1G2O75843 785 aa20.76■□□□□ 0.91
LSM4-203ENST00000593829 SERPINC1P01008 464 aa20.76■□□□□ 0.91
LSM4-203ENST00000593829 LAMP2P13473 410 aa20.76■□□□□ 0.91
LSM4-203ENST00000593829 HMGA1P17096 107 aaKnown RBP20.76■□□□□ 0.91
LSM4-203ENST00000593829 COPB1P53618 953 aaKnown RBP20.76■□□□□ 0.91
LSM4-203ENST00000593829 CACNA2D1P54289 1103 aa20.76■□□□□ 0.91
LSM4-203ENST00000593829 MTMR3Q13615 1198 aa20.76■□□□□ 0.91
LSM4-203ENST00000593829 DMAP1Q9NPF5 467 aaPredicted RBP20.76■□□□□ 0.91
LSM4-203ENST00000593829 KRT82Q9NSB4 513 aa20.76■□□□□ 0.91
LSM4-203ENST00000593829 GDE1Q9NZC3 331 aa20.76■□□□□ 0.91
LSM4-203ENST00000593829 MAGED2Q9UNF1 606 aaPredicted RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms