RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 CAMK4Q16566 473 aa19.65■□□□□ 0.74
SHKBP1-202ENST00000593764 TCERG1LQ5VWI1 586 aa19.65■□□□□ 0.74
SHKBP1-202ENST00000593764 CLEC17AQ6ZS10 378 aa19.65■□□□□ 0.74
SHKBP1-202ENST00000593764 FILIP1Q7Z7B0 1213 aa19.65■□□□□ 0.74
SHKBP1-202ENST00000593764 FAM35AQ86V20 835 aa19.65■□□□□ 0.74
SHKBP1-202ENST00000593764 YAF2Q8IY57 180 aa19.65■□□□□ 0.74
SHKBP1-202ENST00000593764 CELF5Q8N6W0 485 aaKnown RBP19.65■□□□□ 0.74
SHKBP1-202ENST00000593764 C12orf29Q8N999 325 aa19.65■□□□□ 0.74
SHKBP1-202ENST00000593764 RIN3Q8TB24 985 aa19.65■□□□□ 0.74
SHKBP1-202ENST00000593764 BPIFB1Q8TDL5 484 aa19.65■□□□□ 0.74
SHKBP1-202ENST00000593764 SLC35C1Q96A29 364 aa19.65■□□□□ 0.74
SHKBP1-202ENST00000593764 ZFYVE19Q96K21 471 aa19.65■□□□□ 0.74
SHKBP1-202ENST00000593764 CEP63Q96MT8 703 aa19.65■□□□□ 0.74
SHKBP1-202ENST00000593764 CYP2S1Q96SQ9 504 aa19.65■□□□□ 0.74
SHKBP1-202ENST00000593764 KCNK16Q96T55 309 aa19.65■□□□□ 0.74
SHKBP1-202ENST00000593764 OSBPL6Q9BZF3 934 aa19.65■□□□□ 0.74
SHKBP1-202ENST00000593764 LTB4R2Q9NPC1 389 aa19.65■□□□□ 0.74
SHKBP1-202ENST00000593764 TDP1Q9NUW8 608 aa19.65■□□□□ 0.74
SHKBP1-202ENST00000593764 GCNT4Q9P109 453 aa19.65■□□□□ 0.74
SHKBP1-202ENST00000593764 ARMCX3Q9UH62 379 aaPredicted RBP19.65■□□□□ 0.74
SHKBP1-202ENST00000593764 COQ4Q9Y3A0 265 aa19.65■□□□□ 0.74
SHKBP1-202ENST00000593764 C2orf78A6NCI8 922 aa19.64■□□□□ 0.73
SHKBP1-202ENST00000593764 FAM170BA6NMN3 283 aa19.64■□□□□ 0.73
SHKBP1-202ENST00000593764 H0Y858 1186 aa19.64■□□□□ 0.73
SHKBP1-202ENST00000593764 CCDC130P13994 396 aa19.64■□□□□ 0.73
SHKBP1-202ENST00000593764 TARSP26639 723 aaKnown RBP19.64■□□□□ 0.73
SHKBP1-202ENST00000593764 FZD5Q13467 585 aa19.64■□□□□ 0.73
SHKBP1-202ENST00000593764 DCAF17Q5H9S7 520 aaPredicted RBP19.64■□□□□ 0.73
SHKBP1-202ENST00000593764 ZNF852Q6ZMS4 543 aa19.64■□□□□ 0.73
SHKBP1-202ENST00000593764 FRMD5Q7Z6J6 570 aa19.64■□□□□ 0.73
SHKBP1-202ENST00000593764 ZNF687Q8N1G0 1237 aa19.64■□□□□ 0.73
SHKBP1-202ENST00000593764 TATDN2Q93075 761 aa19.64■□□□□ 0.73
SHKBP1-202ENST00000593764 FAXDC2Q96IV6 333 aa19.64■□□□□ 0.73
SHKBP1-202ENST00000593764 ZNF638Q14966 1978 aaKnown RBP19.64■□□□□ 0.73
SHKBP1-202ENST00000593764 MYO15AQ9UKN7 3530 aa19.64■□□□□ 0.73
SHKBP1-202ENST00000593764 PIEZO1Q92508 2521 aa19.63■□□□□ 0.73
SHKBP1-202ENST00000593764 TICRRQ7Z2Z1 1910 aa19.63■□□□□ 0.73
SHKBP1-202ENST00000593764 TNFRSF10BO14763 440 aa19.63■□□□□ 0.73
SHKBP1-202ENST00000593764 CILPO75339 1184 aa19.63■□□□□ 0.73
SHKBP1-202ENST00000593764 BEST1O76090 585 aa19.63■□□□□ 0.73
SHKBP1-202ENST00000593764 ZNF268Q14587 947 aaPredicted RBP19.63■□□□□ 0.73
SHKBP1-202ENST00000593764 UBXN2BQ14CS0 331 aa19.63■□□□□ 0.73
SHKBP1-202ENST00000593764 ARHGAP29Q52LW3 1261 aa19.63■□□□□ 0.73
SHKBP1-202ENST00000593764 NUP93Q8N1F7 819 aa19.63■□□□□ 0.73
SHKBP1-202ENST00000593764 TRIML1Q8N9V2 468 aa19.63■□□□□ 0.73
SHKBP1-202ENST00000593764 CCDC150Q8NCX0 1101 aa19.63■□□□□ 0.73
SHKBP1-202ENST00000593764 ZMIZ2Q8NF64 920 aa19.63■□□□□ 0.73
SHKBP1-202ENST00000593764 SLC2A14Q8TDB8 520 aa19.63■□□□□ 0.73
SHKBP1-202ENST00000593764 SMARCD1Q96GM5 515 aa19.63■□□□□ 0.73
SHKBP1-202ENST00000593764 PHOX2BQ99453 314 aa19.63■□□□□ 0.73
SHKBP1-202ENST00000593764 SMOQ99835 787 aa19.63■□□□□ 0.73
SHKBP1-202ENST00000593764 MED10Q9BTT4 135 aa19.63■□□□□ 0.73
SHKBP1-202ENST00000593764 METTL14Q9HCE5 456 aaKnown RBP19.63■□□□□ 0.73
SHKBP1-202ENST00000593764 TRPC7Q9HCX4 862 aa19.63■□□□□ 0.73
SHKBP1-202ENST00000593764 IL37Q9NZH6 218 aa19.63■□□□□ 0.73
SHKBP1-202ENST00000593764 CTNND2Q9UQB3 1225 aa19.63■□□□□ 0.73
SHKBP1-202ENST00000593764 PIAS3Q9Y6X2 628 aa19.63■□□□□ 0.73
SHKBP1-202ENST00000593764 CACNA1IQ9P0X4 2223 aa19.63■□□□□ 0.73
SHKBP1-202ENST00000593764 DMDP11532 3685 aa19.62■□□□□ 0.73
SHKBP1-202ENST00000593764 ATP8B3O60423 1300 aa19.62■□□□□ 0.73
SHKBP1-202ENST00000593764 ZNF840PA6NDX5 716 aa19.62■□□□□ 0.73
SHKBP1-202ENST00000593764 CD58P19256 250 aa19.62■□□□□ 0.73
SHKBP1-202ENST00000593764 MLLT6P55198 1093 aaPredicted RBP19.62■□□□□ 0.73
SHKBP1-202ENST00000593764 STX17P56962 302 aa19.62■□□□□ 0.73
SHKBP1-202ENST00000593764 TAF10Q12962 218 aa19.62■□□□□ 0.73
SHKBP1-202ENST00000593764 ARL14EPQ8N8R7 260 aaPredicted RBP19.62■□□□□ 0.73
SHKBP1-202ENST00000593764 SCAMP5Q8TAC9 235 aa19.62■□□□□ 0.73
SHKBP1-202ENST00000593764 CLDN23Q96B33 292 aa19.62■□□□□ 0.73
SHKBP1-202ENST00000593764 NELL2Q99435 816 aa19.62■□□□□ 0.73
SHKBP1-202ENST00000593764 ARID3AQ99856 593 aa19.62■□□□□ 0.73
SHKBP1-202ENST00000593764 FAM83CQ9BQN1 747 aa19.62■□□□□ 0.73
SHKBP1-202ENST00000593764 NT5C1AQ9BXI3 368 aa19.62■□□□□ 0.73
SHKBP1-202ENST00000593764 CSNK1G1Q9HCP0 422 aa19.62■□□□□ 0.73
SHKBP1-202ENST00000593764 DMAP1Q9NPF5 467 aaPredicted RBP19.62■□□□□ 0.73
SHKBP1-202ENST00000593764 GKN1Q9NS71 199 aa19.62■□□□□ 0.73
SHKBP1-202ENST00000593764 KRT82Q9NSB4 513 aa19.62■□□□□ 0.73
SHKBP1-202ENST00000593764 FAM49BQ9NUQ9 324 aa19.62■□□□□ 0.73
SHKBP1-202ENST00000593764 GTSE1Q9NYZ3 720 aa19.62■□□□□ 0.73
SHKBP1-202ENST00000593764 EHD2Q9NZN4 543 aa19.62■□□□□ 0.73
SHKBP1-202ENST00000593764 TRPM5Q9NZQ8 1165 aa19.62■□□□□ 0.73
SHKBP1-202ENST00000593764 TRAV19A0A0A6YYK7 116 aa19.61■□□□□ 0.73
SHKBP1-202ENST00000593764 BICDL2A1A5D9 508 aa19.61■□□□□ 0.73
SHKBP1-202ENST00000593764 MAN2B1O00754 1011 aa19.61■□□□□ 0.73
SHKBP1-202ENST00000593764 AP1G2O75843 785 aa19.61■□□□□ 0.73
SHKBP1-202ENST00000593764 PPP3CCP48454 512 aa19.61■□□□□ 0.73
SHKBP1-202ENST00000593764 PLCB2Q00722 1185 aa19.61■□□□□ 0.73
SHKBP1-202ENST00000593764 TNK2Q07912 1038 aa19.61■□□□□ 0.73
SHKBP1-202ENST00000593764 PAK1Q13153 545 aa19.61■□□□□ 0.73
SHKBP1-202ENST00000593764 CSGALNACT1Q8TDX6 532 aa19.61■□□□□ 0.73
SHKBP1-202ENST00000593764 HNRNPABQ99729 332 aaKnown RBP19.61■□□□□ 0.73
SHKBP1-202ENST00000593764 IRF2BPLQ9H1B7 796 aa19.61■□□□□ 0.73
SHKBP1-202ENST00000593764 KIF9Q9HAQ2 790 aa19.61■□□□□ 0.73
SHKBP1-202ENST00000593764 THG1LQ9NWX6 298 aaKnown RBP19.61■□□□□ 0.73
SHKBP1-202ENST00000593764 USP34Q70CQ2 3546 aa19.6■□□□□ 0.73
SHKBP1-202ENST00000593764 PMM2O15305 246 aa19.6■□□□□ 0.73
SHKBP1-202ENST00000593764 RTN3O95197 1032 aaPredicted RBP19.6■□□□□ 0.73
SHKBP1-202ENST00000593764 USP17L7P0C7H9 530 aa19.6■□□□□ 0.73
SHKBP1-202ENST00000593764 HDCP19113 662 aa19.6■□□□□ 0.73
SHKBP1-202ENST00000593764 YWHAQP27348 245 aa19.6■□□□□ 0.73
SHKBP1-202ENST00000593764 SOX9P48436 509 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms