RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 SP2Q02086 613 aa11.92□□□□□ -0.5
SEH1L-208ENST00000590843 MAPK8IP2Q13387 824 aaPredicted RBP11.92□□□□□ -0.5
SEH1L-208ENST00000590843 IMPG1Q17R60 797 aa11.92□□□□□ -0.5
SEH1L-208ENST00000590843 BOLA3Q53S33 107 aa11.92□□□□□ -0.5
SEH1L-208ENST00000590843 LZICQ8WZA0 190 aa11.92□□□□□ -0.5
SEH1L-208ENST00000590843 PKD2L2Q9NZM6 624 aa11.92□□□□□ -0.5
SEH1L-208ENST00000590843 KLHL3Q9UH77 587 aa11.92□□□□□ -0.5
SEH1L-208ENST00000590843 BMP10O95393 424 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 SERPINA4P29622 427 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 KRT20P35900 424 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 MRPS5P82675 430 aaKnown RBP11.91□□□□□ -0.5
SEH1L-208ENST00000590843 PSMD6Q15008 389 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 KCNT2Q6UVM3 1135 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 MCRS1Q96EZ8 462 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 KDM4CQ9H3R0 1056 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 MARCH2Q9P0N8 246 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 RSPH14Q9UHP6 348 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 SERPIND1P05546 499 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 EPHB2P29323 1055 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 GRM5P41594 1212 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 SATB1Q01826 763 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 SPOPLQ6IQ16 392 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 SIRT2Q8IXJ6 389 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 PPFIBP2Q8ND30 876 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 TSPAN17Q96FV3 270 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 CBX8Q9HC52 389 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 PCSK1NQ9UHG2 260 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 TKTL1P51854 596 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 ROR1Q01973 937 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 NSUN2Q08J23 767 aaKnown RBP eCLIP11.91□□□□□ -0.5
SEH1L-208ENST00000590843 CCNG2Q16589 344 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 UGP2Q16851 508 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 ACOT1Q86TX2 421 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 NUP93Q8N1F7 819 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 C1QTNF1Q9BXJ1 281 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 AFF4Q9UHB7 1163 aaKnown RBP11.91□□□□□ -0.5
SEH1L-208ENST00000590843 A0A1W2PQ67 120 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 SMIM23A6NLE4 172 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 HNRNPA1P09651 372 aaKnown RBP eCLIP11.91□□□□□ -0.5
SEH1L-208ENST00000590843 CXCL8P10145 99 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 HNRNPH2P55795 449 aaKnown RBP11.91□□□□□ -0.5
SEH1L-208ENST00000590843 CCL14Q16627 93 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 MPPE1Q53F39 396 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 C17orf99Q6UX52 265 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 ATP13A1Q9HD20 1204 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.91□□□□□ -0.5
SEH1L-208ENST00000590843 MAN1B1Q9UKM7 699 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 PCDHGB4Q9UN71 923 aa11.91□□□□□ -0.5
SEH1L-208ENST00000590843 HEATR9A2RTY3 570 aa11.9□□□□□ -0.5
SEH1L-208ENST00000590843 NEMP2A6NFY4 417 aa11.9□□□□□ -0.5
SEH1L-208ENST00000590843 FGFR4P22455 802 aa11.9□□□□□ -0.5
SEH1L-208ENST00000590843 GEMP55040 296 aa11.9□□□□□ -0.5
SEH1L-208ENST00000590843 ALKBH5Q6P6C2 394 aaKnown RBP11.9□□□□□ -0.5
SEH1L-208ENST00000590843 LINC00523Q86TU6 105 aa11.9□□□□□ -0.5
SEH1L-208ENST00000590843 MAGOHBQ96A72 148 aaKnown RBP11.9□□□□□ -0.5
SEH1L-208ENST00000590843 IL12RB2Q99665 862 aa11.9□□□□□ -0.5
SEH1L-208ENST00000590843 TRIM31Q9BZY9 425 aa11.9□□□□□ -0.5
SEH1L-208ENST00000590843 NNTQ13423 1086 aa11.9□□□□□ -0.5
SEH1L-208ENST00000590843 VGLL2Q8N8G2 317 aa11.9□□□□□ -0.5
SEH1L-208ENST00000590843 CDC26Q8NHZ8 85 aa11.9□□□□□ -0.5
SEH1L-208ENST00000590843 KIAA1143Q96AT1 154 aaPredicted RBP11.9□□□□□ -0.5
SEH1L-208ENST00000590843 LRRC46Q96FV0 321 aa11.9□□□□□ -0.5
SEH1L-208ENST00000590843 TOX2Q96NM4 488 aa11.9□□□□□ -0.5
SEH1L-208ENST00000590843 WBP1LQ9NX94 342 aa11.9□□□□□ -0.5
SEH1L-208ENST00000590843 C2CD2Q9Y426 696 aa11.9□□□□□ -0.5
SEH1L-208ENST00000590843 ASTN2O75129 1339 aaPredicted RBP11.9□□□□□ -0.5
SEH1L-208ENST00000590843 CAMK2GQ13555 558 aaPredicted RBP11.9□□□□□ -0.5
SEH1L-208ENST00000590843 DRAP1Q14919 205 aaPredicted RBP11.9□□□□□ -0.5
SEH1L-208ENST00000590843 KLHL7Q8IXQ5 586 aa11.9□□□□□ -0.5
SEH1L-208ENST00000590843 PHC3Q8NDX5 983 aa11.9□□□□□ -0.5
SEH1L-208ENST00000590843 RNF217Q8TC41 542 aa11.9□□□□□ -0.5
SEH1L-208ENST00000590843 PBKQ96KB5 322 aa11.9□□□□□ -0.5
SEH1L-208ENST00000590843 NIFKQ9BYG3 293 aaKnown RBP11.9□□□□□ -0.5
SEH1L-208ENST00000590843 PDGFCQ9NRA1 345 aa11.9□□□□□ -0.5
SEH1L-208ENST00000590843 LATS2Q9NRM7 1088 aa11.9□□□□□ -0.5
SEH1L-208ENST00000590843 ATRNL1Q5VV63 1379 aa11.9□□□□□ -0.5
SEH1L-208ENST00000590843 A0A087WWV3 80 aa11.9□□□□□ -0.51
SEH1L-208ENST00000590843 CBX4O00257 560 aa11.9□□□□□ -0.51
SEH1L-208ENST00000590843 IGF2BP3O00425 579 aaKnown RBP eCLIP11.9□□□□□ -0.51
SEH1L-208ENST00000590843 PTENP60484 403 aa11.9□□□□□ -0.51
SEH1L-208ENST00000590843 BROXQ5VW32 411 aa11.9□□□□□ -0.51
SEH1L-208ENST00000590843 TFB1MQ8WVM0 346 aaKnown RBP11.9□□□□□ -0.51
SEH1L-208ENST00000590843 INPP4AQ96PE3 977 aaPredicted RBP11.9□□□□□ -0.51
SEH1L-208ENST00000590843 TEX12Q9BXU0 123 aa11.9□□□□□ -0.51
SEH1L-208ENST00000590843 NSMCE4AQ9NXX6 385 aa11.9□□□□□ -0.51
SEH1L-208ENST00000590843 NFAT5O94916 1531 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 KIF3CO14782 793 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 RASGRF2O14827 1237 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 TRIM49P0CI25 452 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 TRIM49CP0CI26 452 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 AKT2P31751 481 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 CUL2Q13617 745 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 ACOX1Q15067 660 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 JADE1Q6IE81 842 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 SPATA24Q86W54 205 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 BRSK2Q8IWQ3 736 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.89□□□□□ -0.51
SEH1L-208ENST00000590843 GABRQQ9UN88 632 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 RAMP2O60895 175 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 USP45Q70EL2 814 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms