RNA–Protein interactions for RNA: ENST00000590118.5

CROCCP3-204, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 4 BASIC

Gene CROCCP3, Length 574 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-204ENST00000590118 FREM2Q5SZK8 3169 aa15.05■□□□□ -0
CROCCP3-204ENST00000590118 A0A0A0MRY4 1105 aa15.04■□□□□ -0
CROCCP3-204ENST00000590118 MYMKA6NI61 221 aa15.04■□□□□ -0
CROCCP3-204ENST00000590118 K7ENM7 598 aa15.04■□□□□ -0
CROCCP3-204ENST00000590118 CYP17A1P05093 508 aa15.04■□□□□ -0
CROCCP3-204ENST00000590118 KIR2DL1P43626 348 aaPredicted RBP15.04■□□□□ -0
CROCCP3-204ENST00000590118 SLC6A11P48066 632 aa15.04■□□□□ -0
CROCCP3-204ENST00000590118 INTS6LQ5JSJ4 861 aaKnown RBP15.04■□□□□ -0
CROCCP3-204ENST00000590118 EMC10Q5UCC4 262 aa15.04■□□□□ -0
CROCCP3-204ENST00000590118 ADGRG2Q8IZP9 1017 aa15.04■□□□□ -0
CROCCP3-204ENST00000590118 MINDY1Q8N5J2 469 aa15.04■□□□□ -0
CROCCP3-204ENST00000590118 SPATA18Q8TC71 538 aa15.04■□□□□ -0
CROCCP3-204ENST00000590118 PNKPQ96T60 521 aa15.04■□□□□ -0
CROCCP3-204ENST00000590118 DDX43Q9NXZ2 648 aaKnown RBP15.04■□□□□ -0
CROCCP3-204ENST00000590118 HELZ2Q9BYK8 2649 aaKnown RBP15.04■□□□□ -0
CROCCP3-204ENST00000590118 TCRBV21S2A2A0A5A6 115 aa15.03■□□□□ -0
CROCCP3-204ENST00000590118 ANKRD63C9JTQ0 380 aa15.03■□□□□ -0
CROCCP3-204ENST00000590118 LEFTY2O00292 366 aa15.03■□□□□ -0
CROCCP3-204ENST00000590118 ARHGAP33O14559 1287 aa15.03■□□□□ -0
CROCCP3-204ENST00000590118 AP5Z1O43299 807 aa15.03■□□□□ -0
CROCCP3-204ENST00000590118 ADAM23O75077 832 aa15.03■□□□□ -0
CROCCP3-204ENST00000590118 KAT7O95251 611 aa15.03■□□□□ -0
CROCCP3-204ENST00000590118 APODP05090 189 aa15.03■□□□□ -0
CROCCP3-204ENST00000590118 ACAT1P24752 427 aaKnown RBP15.03■□□□□ -0
CROCCP3-204ENST00000590118 PDE6CP51160 858 aa15.03■□□□□ -0
CROCCP3-204ENST00000590118 NEK4P51957 841 aa15.03■□□□□ -0
CROCCP3-204ENST00000590118 DHCR24Q15392 516 aa15.03■□□□□ -0
CROCCP3-204ENST00000590118 TRIP6Q15654 476 aaKnown RBP15.03■□□□□ -0
CROCCP3-204ENST00000590118 CFAP221Q4G0U5 840 aa15.03■□□□□ -0
CROCCP3-204ENST00000590118 ADALQ6DHV7 355 aa15.03■□□□□ -0
CROCCP3-204ENST00000590118 FILIP1Q7Z7B0 1213 aa15.03■□□□□ -0
CROCCP3-204ENST00000590118 PGBD3Q8N328 593 aa15.03■□□□□ -0
CROCCP3-204ENST00000590118 DEFB119Q8N690 84 aa15.03■□□□□ -0
CROCCP3-204ENST00000590118 MYCT1Q8N699 235 aa15.03■□□□□ -0
CROCCP3-204ENST00000590118 OR2I1PQ8NGU4 316 aa15.03■□□□□ -0
CROCCP3-204ENST00000590118 ADAMTS14Q8WXS8 1223 aa15.03■□□□□ -0
CROCCP3-204ENST00000590118 ZNF560Q96MR9 790 aa15.03■□□□□ -0
CROCCP3-204ENST00000590118 REEP2Q9BRK0 252 aa15.03■□□□□ -0
CROCCP3-204ENST00000590118 CCDC86Q9H6F5 360 aaKnown RBP15.03■□□□□ -0
CROCCP3-204ENST00000590118 DNAAF2Q9NVR5 837 aaKnown RBP15.03■□□□□ -0
CROCCP3-204ENST00000590118 GTF3C4Q9UKN8 822 aa15.03■□□□□ -0
CROCCP3-204ENST00000590118 L1RE1Q9UN81 338 aa15.03■□□□□ -0
CROCCP3-204ENST00000590118 PTPRBP23467 1997 aa15.02■□□□□ -0
CROCCP3-204ENST00000590118 TISP43B9A030 160 aa15.02■□□□□ -0
CROCCP3-204ENST00000590118 TRAK2O60296 914 aa15.02■□□□□ -0
CROCCP3-204ENST00000590118 PFKLP17858 780 aa15.02■□□□□ -0
CROCCP3-204ENST00000590118 EIF2DP41214 584 aaKnown RBP15.02■□□□□ -0
CROCCP3-204ENST00000590118 PNPLA4P41247 253 aa15.02■□□□□ -0
CROCCP3-204ENST00000590118 ZNF131P52739 623 aa15.02■□□□□ -0
CROCCP3-204ENST00000590118 ATP2C1P98194 919 aaPredicted RBP15.02■□□□□ -0
CROCCP3-204ENST00000590118 GTF2BQ00403 316 aa15.02■□□□□ -0
CROCCP3-204ENST00000590118 MYL7Q01449 175 aa15.02■□□□□ -0
CROCCP3-204ENST00000590118 POU5F1Q01860 360 aaKnown RBP15.02■□□□□ -0
CROCCP3-204ENST00000590118 RPL6Q02878 288 aaKnown RBP15.02■□□□□ -0
CROCCP3-204ENST00000590118 ZNF33AQ06730 810 aa15.02■□□□□ -0
CROCCP3-204ENST00000590118 CCDC142Q17RM4 750 aa15.02■□□□□ -0
CROCCP3-204ENST00000590118 CCNI2Q6ZMN8 369 aaPredicted RBP15.02■□□□□ -0
CROCCP3-204ENST00000590118 RABEPKQ7Z6M1 372 aa15.02■□□□□ -0
CROCCP3-204ENST00000590118 C12orf40Q86WS4 652 aa15.02■□□□□ -0
CROCCP3-204ENST00000590118 CCDC83Q8IWF9 413 aa15.02■□□□□ -0
CROCCP3-204ENST00000590118 SCN4BQ8IWT1 228 aa15.02■□□□□ -0
CROCCP3-204ENST00000590118 KIAA1958Q8N8K9 716 aa15.02■□□□□ -0
CROCCP3-204ENST00000590118 FUBP3Q96I24 572 aaKnown RBP eCLIP15.02■□□□□ -0
CROCCP3-204ENST00000590118 CDK5RAP3Q96JB5 506 aa15.02■□□□□ -0
CROCCP3-204ENST00000590118 CAMK1GQ96NX5 476 aa15.02■□□□□ -0
CROCCP3-204ENST00000590118 BBC3Q96PG8 261 aaPredicted RBP15.02■□□□□ -0
CROCCP3-204ENST00000590118 FIZ1Q96SL8 496 aa15.02■□□□□ -0
CROCCP3-204ENST00000590118 LLPHQ9BRT6 129 aaKnown RBP15.02■□□□□ -0
CROCCP3-204ENST00000590118 PARVGQ9HBI0 331 aa15.02■□□□□ -0
CROCCP3-204ENST00000590118 ZDHHC4Q9NPG8 344 aa15.02■□□□□ -0
CROCCP3-204ENST00000590118 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.02■□□□□ -0
CROCCP3-204ENST00000590118 AGO2Q9UKV8 859 aaKnown RBP15.02■□□□□ -0
CROCCP3-204ENST00000590118 STYXL1Q9Y6J8 313 aa15.02■□□□□ -0
CROCCP3-204ENST00000590118 KNL1Q8NG31 2342 aa15.01□□□□□ -0.01
CROCCP3-204ENST00000590118 SH3BP5O60239 455 aa15.01□□□□□ -0.01
CROCCP3-204ENST00000590118 HUS1O60921 280 aa15.01□□□□□ -0.01
CROCCP3-204ENST00000590118 FAM13AO94988 1023 aa15.01□□□□□ -0.01
CROCCP3-204ENST00000590118 FTH1P19P0C7X4 201 aa15.01□□□□□ -0.01
CROCCP3-204ENST00000590118 GRIA2P42262 883 aa15.01□□□□□ -0.01
CROCCP3-204ENST00000590118 TNFRSF4P43489 277 aa15.01□□□□□ -0.01
CROCCP3-204ENST00000590118 SLC14A1Q13336 389 aa15.01□□□□□ -0.01
CROCCP3-204ENST00000590118 TMEM119Q4V9L6 283 aa15.01□□□□□ -0.01
CROCCP3-204ENST00000590118 SLFN12LQ6IEE8 588 aa15.01□□□□□ -0.01
CROCCP3-204ENST00000590118 RHBDF2Q6PJF5 856 aa15.01□□□□□ -0.01
CROCCP3-204ENST00000590118 CRELD2Q6UXH1 353 aaPredicted RBP15.01□□□□□ -0.01
CROCCP3-204ENST00000590118 SLC36A4Q6YBV0 504 aa15.01□□□□□ -0.01
CROCCP3-204ENST00000590118 OSTM1Q86WC4 334 aa15.01□□□□□ -0.01
CROCCP3-204ENST00000590118 NT5DC4Q86YG4 428 aa15.01□□□□□ -0.01
CROCCP3-204ENST00000590118 SPATA2LQ8IUW3 424 aaPredicted RBP15.01□□□□□ -0.01
CROCCP3-204ENST00000590118 TMEM86AQ8N2M4 240 aa15.01□□□□□ -0.01
CROCCP3-204ENST00000590118 PNPLA1Q8N8W4 532 aa15.01□□□□□ -0.01
CROCCP3-204ENST00000590118 HNRNPLLQ8WVV9 542 aaKnown RBP15.01□□□□□ -0.01
CROCCP3-204ENST00000590118 PCDHB9Q9Y5E1 797 aa15.01□□□□□ -0.01
CROCCP3-204ENST00000590118 KNTC1P50748 2209 aa15.01□□□□□ -0.01
CROCCP3-204ENST00000590118 LOC400499M0QZD8 3231 aa15.01□□□□□ -0.01
CROCCP3-204ENST00000590118 CABIN1Q9Y6J0 2220 aa15□□□□□ -0.01
CROCCP3-204ENST00000590118 SLC9A3R1O14745 358 aaPredicted RBP15□□□□□ -0.01
CROCCP3-204ENST00000590118 GJB3O75712 270 aa15□□□□□ -0.01
CROCCP3-204ENST00000590118 ZIC2O95409 532 aaPredicted RBP15□□□□□ -0.01
CROCCP3-204ENST00000590118 SYPP08247 313 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms