RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 EHHADHQ08426 723 aa19.15■□□□□ 0.66
PRKCSH-211ENST00000590098 USP4Q13107 963 aa19.15■□□□□ 0.66
PRKCSH-211ENST00000590098 NR1H3Q13133 447 aa19.15■□□□□ 0.66
PRKCSH-211ENST00000590098 WDR72Q3MJ13 1102 aa19.15■□□□□ 0.66
PRKCSH-211ENST00000590098 MDH1BQ5I0G3 518 aa19.15■□□□□ 0.66
PRKCSH-211ENST00000590098 ATL3Q6DD88 541 aa19.15■□□□□ 0.66
PRKCSH-211ENST00000590098 PKN3Q6P5Z2 889 aa19.15■□□□□ 0.66
PRKCSH-211ENST00000590098 SH3RF2Q8TEC5 729 aa19.15■□□□□ 0.66
PRKCSH-211ENST00000590098 PCED1BQ96HM7 432 aa19.15■□□□□ 0.66
PRKCSH-211ENST00000590098 MRPL45Q9BRJ2 306 aaKnown RBP19.15■□□□□ 0.66
PRKCSH-211ENST00000590098 SLC39A2Q9NP94 309 aa19.15■□□□□ 0.66
PRKCSH-211ENST00000590098 GCNT4Q9P109 453 aa19.15■□□□□ 0.66
PRKCSH-211ENST00000590098 CFAP45Q9UL16 551 aa19.15■□□□□ 0.66
PRKCSH-211ENST00000590098 PCDHA7Q9UN72 937 aa19.15■□□□□ 0.66
PRKCSH-211ENST00000590098 WNT6Q9Y6F9 365 aa19.15■□□□□ 0.66
PRKCSH-211ENST00000590098 EXOC3O60645 756 aa19.14■□□□□ 0.65
PRKCSH-211ENST00000590098 PHACTR2O75167 634 aa19.14■□□□□ 0.65
PRKCSH-211ENST00000590098 KNOP1Q1ED39 458 aaKnown RBP19.14■□□□□ 0.65
PRKCSH-211ENST00000590098 BMT2Q1RMZ1 405 aa19.14■□□□□ 0.65
PRKCSH-211ENST00000590098 FBXO43Q4G163 708 aa19.14■□□□□ 0.65
PRKCSH-211ENST00000590098 CEP57L1Q8IYX8 460 aa19.14■□□□□ 0.65
PRKCSH-211ENST00000590098 FAM160A2Q8N612 972 aaPredicted RBP19.14■□□□□ 0.65
PRKCSH-211ENST00000590098 GOLGA5Q8TBA6 731 aa19.14■□□□□ 0.65
PRKCSH-211ENST00000590098 RTKNQ9BST9 563 aa19.14■□□□□ 0.65
PRKCSH-211ENST00000590098 FBRSL1Q9HCM7 1045 aaKnown RBP19.14■□□□□ 0.65
PRKCSH-211ENST00000590098 SEMA4GQ9NTN9 838 aa19.14■□□□□ 0.65
PRKCSH-211ENST00000590098 ARHGAP26Q9UNA1 814 aa19.14■□□□□ 0.65
PRKCSH-211ENST00000590098 CCDC163A0A0D9SF12 145 aa19.13■□□□□ 0.65
PRKCSH-211ENST00000590098 FOXD2O60548 495 aaPredicted RBP19.13■□□□□ 0.65
PRKCSH-211ENST00000590098 TCF3P15923 654 aa19.13■□□□□ 0.65
PRKCSH-211ENST00000590098 PFKLP17858 780 aa19.13■□□□□ 0.65
PRKCSH-211ENST00000590098 PTPN1P18031 435 aaKnown RBP19.13■□□□□ 0.65
PRKCSH-211ENST00000590098 PPP3CCP48454 512 aa19.13■□□□□ 0.65
PRKCSH-211ENST00000590098 PXNP49023 591 aaPredicted RBP19.13■□□□□ 0.65
PRKCSH-211ENST00000590098 CUL4BQ13620 913 aa19.13■□□□□ 0.65
PRKCSH-211ENST00000590098 CSRP2Q16527 193 aa19.13■□□□□ 0.65
PRKCSH-211ENST00000590098 EML3Q32P44 896 aa19.13■□□□□ 0.65
PRKCSH-211ENST00000590098 RESP18Q5W5W9 173 aa19.13■□□□□ 0.65
PRKCSH-211ENST00000590098 C12orf56Q8IXR9 622 aa19.13■□□□□ 0.65
PRKCSH-211ENST00000590098 CAMKK1Q8N5S9 505 aa19.13■□□□□ 0.65
PRKCSH-211ENST00000590098 GAB3Q8WWW8 586 aa19.13■□□□□ 0.65
PRKCSH-211ENST00000590098 CD101Q93033 1021 aa19.13■□□□□ 0.65
PRKCSH-211ENST00000590098 SYAP1Q96A49 352 aaPredicted RBP19.13■□□□□ 0.65
PRKCSH-211ENST00000590098 C8orf48Q96LL4 319 aa19.13■□□□□ 0.65
PRKCSH-211ENST00000590098 NXF1Q9UBU9 619 aaKnown RBP19.13■□□□□ 0.65
PRKCSH-211ENST00000590098 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.13■□□□□ 0.65
PRKCSH-211ENST00000590098 A8MXQ7 604 aa19.12■□□□□ 0.65
PRKCSH-211ENST00000590098 F8VP50 259 aa19.12■□□□□ 0.65
PRKCSH-211ENST00000590098 RPP40O75818 363 aaKnown RBP19.12■□□□□ 0.65
PRKCSH-211ENST00000590098 CLSTN1O94985 981 aa19.12■□□□□ 0.65
PRKCSH-211ENST00000590098 NFATC1O95644 943 aa19.12■□□□□ 0.65
PRKCSH-211ENST00000590098 STAU1O95793 577 aaKnown RBP19.12■□□□□ 0.65
PRKCSH-211ENST00000590098 ABL1P00519 1130 aa19.12■□□□□ 0.65
PRKCSH-211ENST00000590098 CCDC192P0DO97 292 aa19.12■□□□□ 0.65
PRKCSH-211ENST00000590098 ATICP31939 592 aa19.12■□□□□ 0.65
PRKCSH-211ENST00000590098 MYL6P60660 151 aa19.12■□□□□ 0.65
PRKCSH-211ENST00000590098 USP46P62068 366 aa19.12■□□□□ 0.65
PRKCSH-211ENST00000590098 NOP14P78316 857 aaKnown RBP19.12■□□□□ 0.65
PRKCSH-211ENST00000590098 TDRD10Q5VZ19 366 aaKnown RBP19.12■□□□□ 0.65
PRKCSH-211ENST00000590098 PRR23CQ6ZRP0 262 aa19.12■□□□□ 0.65
PRKCSH-211ENST00000590098 CACNA2D4Q7Z3S7 1137 aa19.12■□□□□ 0.65
PRKCSH-211ENST00000590098 ZNF516Q92618 1163 aa19.12■□□□□ 0.65
PRKCSH-211ENST00000590098 TTLL2Q9BWV7 592 aa19.12■□□□□ 0.65
PRKCSH-211ENST00000590098 ELOVL4Q9GZR5 314 aa19.12■□□□□ 0.65
PRKCSH-211ENST00000590098 LINC00597Q9H2U6 94 aa19.12■□□□□ 0.65
PRKCSH-211ENST00000590098 POLR3BQ9NW08 1133 aaPredicted RBP19.12■□□□□ 0.65
PRKCSH-211ENST00000590098 DCDC2BA2VCK2 349 aa19.11■□□□□ 0.65
PRKCSH-211ENST00000590098 PSMD2Q13200 908 aa19.11■□□□□ 0.65
PRKCSH-211ENST00000590098 BIRC3Q13489 604 aa19.11■□□□□ 0.65
PRKCSH-211ENST00000590098 NAIF1Q69YI7 327 aaPredicted RBP19.11■□□□□ 0.65
PRKCSH-211ENST00000590098 RPLP0P6Q8NHW5 317 aa19.11■□□□□ 0.65
PRKCSH-211ENST00000590098 CCDC26Q8TAB7 109 aa19.11■□□□□ 0.65
PRKCSH-211ENST00000590098 NETO1Q8TDF5 533 aa19.11■□□□□ 0.65
PRKCSH-211ENST00000590098 SLITRK1Q96PX8 696 aa19.11■□□□□ 0.65
PRKCSH-211ENST00000590098 DPEP3Q9H4B8 488 aa19.11■□□□□ 0.65
PRKCSH-211ENST00000590098 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.1■□□□□ 0.65
PRKCSH-211ENST00000590098 ZNF840PA6NDX5 716 aa19.1■□□□□ 0.65
PRKCSH-211ENST00000590098 LEFTY2O00292 366 aa19.1■□□□□ 0.65
PRKCSH-211ENST00000590098 AXIN1O15169 862 aa19.1■□□□□ 0.65
PRKCSH-211ENST00000590098 AP3M2P53677 418 aa19.1■□□□□ 0.65
PRKCSH-211ENST00000590098 GRAMD1CQ8IYS0 662 aa19.1■□□□□ 0.65
PRKCSH-211ENST00000590098 B3GALNT2Q8NCR0 500 aa19.1■□□□□ 0.65
PRKCSH-211ENST00000590098 ACDQ96AP0 544 aa19.1■□□□□ 0.65
PRKCSH-211ENST00000590098 EXOC1Q9NV70 894 aa19.1■□□□□ 0.65
PRKCSH-211ENST00000590098 SERTAD1Q9UHV2 236 aa19.1■□□□□ 0.65
PRKCSH-211ENST00000590098 NME7Q9Y5B8 376 aa19.1■□□□□ 0.65
PRKCSH-211ENST00000590098 MYO16Q9Y6X6 1858 aa19.09■□□□□ 0.65
PRKCSH-211ENST00000590098 ATP8B3O60423 1300 aa19.09■□□□□ 0.65
PRKCSH-211ENST00000590098 SLFN14P0C7P3 912 aa19.09■□□□□ 0.65
PRKCSH-211ENST00000590098 CASP4P49662 377 aa19.09■□□□□ 0.65
PRKCSH-211ENST00000590098 SLC7A9P82251 487 aa19.09■□□□□ 0.65
PRKCSH-211ENST00000590098 DNM1Q05193 864 aaKnown RBP19.09■□□□□ 0.65
PRKCSH-211ENST00000590098 IFRD2Q12894 506 aaPredicted RBP19.09■□□□□ 0.65
PRKCSH-211ENST00000590098 TAF10Q12962 218 aa19.09■□□□□ 0.65
PRKCSH-211ENST00000590098 ZNF699Q32M78 642 aa19.09■□□□□ 0.65
PRKCSH-211ENST00000590098 SYT13Q7L8C5 426 aa19.09■□□□□ 0.65
PRKCSH-211ENST00000590098 LOXL4Q96JB6 756 aa19.09■□□□□ 0.65
PRKCSH-211ENST00000590098 HHIPQ96QV1 700 aa19.09■□□□□ 0.65
PRKCSH-211ENST00000590098 B3GNT5Q9BYG0 378 aa19.09■□□□□ 0.65
PRKCSH-211ENST00000590098 ZNF518BQ9C0D4 1074 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms