RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 PTPN1P18031 435 aaKnown RBP13.51□□□□□ -0.25
RFX1-207ENST00000589937 CMA1P23946 247 aa13.51□□□□□ -0.25
RFX1-207ENST00000589937 GNL1P36915 607 aaPredicted RBP13.51□□□□□ -0.25
RFX1-207ENST00000589937 ID4P47928 161 aa13.51□□□□□ -0.25
RFX1-207ENST00000589937 PXNP49023 591 aaPredicted RBP13.51□□□□□ -0.25
RFX1-207ENST00000589937 MLLT6P55198 1093 aaPredicted RBP13.51□□□□□ -0.25
RFX1-207ENST00000589937 KRT85P78386 507 aa13.51□□□□□ -0.25
RFX1-207ENST00000589937 TRPC3Q13507 836 aa13.51□□□□□ -0.25
RFX1-207ENST00000589937 RUNX3Q13761 415 aa13.51□□□□□ -0.25
RFX1-207ENST00000589937 LRRC32Q14392 662 aa13.51□□□□□ -0.25
RFX1-207ENST00000589937 SPEM1Q8N4L4 309 aa13.51□□□□□ -0.25
RFX1-207ENST00000589937 FSIP1Q8NA03 581 aa13.51□□□□□ -0.25
RFX1-207ENST00000589937 B3GALNT2Q8NCR0 500 aa13.51□□□□□ -0.25
RFX1-207ENST00000589937 SH3RF2Q8TEC5 729 aa13.51□□□□□ -0.25
RFX1-207ENST00000589937 PARD3BQ8TEW8 1205 aa13.51□□□□□ -0.25
RFX1-207ENST00000589937 MSANTD3Q96H12 275 aa13.51□□□□□ -0.25
RFX1-207ENST00000589937 KIF9Q9HAQ2 790 aa13.51□□□□□ -0.25
RFX1-207ENST00000589937 PARD6AQ9NPB6 346 aa13.51□□□□□ -0.25
RFX1-207ENST00000589937 THG1LQ9NWX6 298 aaKnown RBP13.51□□□□□ -0.25
RFX1-207ENST00000589937 UXTQ9UBK9 157 aaPredicted RBP13.51□□□□□ -0.25
RFX1-207ENST00000589937 MAPK8IP1Q9UQF2 711 aa13.51□□□□□ -0.25
RFX1-207ENST00000589937 A8MXQ7 604 aa13.5□□□□□ -0.25
RFX1-207ENST00000589937 C4BPAP04003 597 aaKnown RBP13.5□□□□□ -0.25
RFX1-207ENST00000589937 TRIM49P0CI25 452 aa13.5□□□□□ -0.25
RFX1-207ENST00000589937 TRIM49CP0CI26 452 aa13.5□□□□□ -0.25
RFX1-207ENST00000589937 SYKP43405 635 aa13.5□□□□□ -0.25
RFX1-207ENST00000589937 CXCL12P48061 93 aa13.5□□□□□ -0.25
RFX1-207ENST00000589937 SNRPFP62306 86 aaKnown RBP13.5□□□□□ -0.25
RFX1-207ENST00000589937 FAM160A1Q05DH4 1040 aa13.5□□□□□ -0.25
RFX1-207ENST00000589937 NCOA4Q13772 614 aa13.5□□□□□ -0.25
RFX1-207ENST00000589937 ZNF268Q14587 947 aaPredicted RBP13.5□□□□□ -0.25
RFX1-207ENST00000589937 KCNB1Q14721 858 aa13.5□□□□□ -0.25
RFX1-207ENST00000589937 TMEM196Q5HYL7 178 aa13.5□□□□□ -0.25
RFX1-207ENST00000589937 CEP135Q66GS9 1140 aa13.5□□□□□ -0.25
RFX1-207ENST00000589937 VSTM1Q6UX27 236 aa13.5□□□□□ -0.25
RFX1-207ENST00000589937 PRR23BQ6ZRT6 265 aa13.5□□□□□ -0.25
RFX1-207ENST00000589937 DENND5BQ6ZUT9 1274 aa13.5□□□□□ -0.25
RFX1-207ENST00000589937 FAM35AQ86V20 835 aa13.5□□□□□ -0.25
RFX1-207ENST00000589937 SPATA17Q96L03 361 aa13.5□□□□□ -0.25
RFX1-207ENST00000589937 TTLL2Q9BWV7 592 aa13.5□□□□□ -0.25
RFX1-207ENST00000589937 SMPD4Q9NXE4 827 aa13.5□□□□□ -0.25
RFX1-207ENST00000589937 LAMA1P25391 3075 aa13.5□□□□□ -0.25
RFX1-207ENST00000589937 HRO43593 1189 aa13.49□□□□□ -0.25
RFX1-207ENST00000589937 RNF40O75150 1001 aa13.49□□□□□ -0.25
RFX1-207ENST00000589937 STAU1O95793 577 aaKnown RBP13.49□□□□□ -0.25
RFX1-207ENST00000589937 USP17L7P0C7H9 530 aa13.49□□□□□ -0.25
RFX1-207ENST00000589937 CCDC130P13994 396 aa13.49□□□□□ -0.25
RFX1-207ENST00000589937 ANXA13P27216 316 aa13.49□□□□□ -0.25
RFX1-207ENST00000589937 GJA4P35212 333 aa13.49□□□□□ -0.25
RFX1-207ENST00000589937 CLDN10P78369 228 aa13.49□□□□□ -0.25
RFX1-207ENST00000589937 DPYDQ12882 1025 aa13.49□□□□□ -0.25
RFX1-207ENST00000589937 EML3Q32P44 896 aa13.49□□□□□ -0.25
RFX1-207ENST00000589937 DGKKQ5KSL6 1271 aa13.49□□□□□ -0.25
RFX1-207ENST00000589937 CC2D1AQ6P1N0 951 aaPredicted RBP13.49□□□□□ -0.25
RFX1-207ENST00000589937 PAQR9Q6ZVX9 377 aa13.49□□□□□ -0.25
RFX1-207ENST00000589937 SFTPA1Q8IWL2 248 aa13.49□□□□□ -0.25
RFX1-207ENST00000589937 SMYD4Q8IYR2 804 aaPredicted RBP13.49□□□□□ -0.25
RFX1-207ENST00000589937 SYAP1Q96A49 352 aaPredicted RBP13.49□□□□□ -0.25
RFX1-207ENST00000589937 KCNK16Q96T55 309 aa13.49□□□□□ -0.25
RFX1-207ENST00000589937 IER2Q9BTL4 223 aa13.49□□□□□ -0.25
RFX1-207ENST00000589937 RNF38Q9H0F5 515 aa13.49□□□□□ -0.25
RFX1-207ENST00000589937 LINC00597Q9H2U6 94 aa13.49□□□□□ -0.25
RFX1-207ENST00000589937 ECT2Q9H8V3 914 aa13.49□□□□□ -0.25
RFX1-207ENST00000589937 DUS2Q9NX74 493 aaKnown RBP13.49□□□□□ -0.25
RFX1-207ENST00000589937 CGNQ9P2M7 1197 aaKnown RBP13.49□□□□□ -0.25
RFX1-207ENST00000589937 MYO18AQ92614 2054 aaKnown RBP13.49□□□□□ -0.25
RFX1-207ENST00000589937 NCOR2Q9Y618 2525 aa13.48□□□□□ -0.25
RFX1-207ENST00000589937 NUP205Q92621 2012 aa13.48□□□□□ -0.25
RFX1-207ENST00000589937 FAM237AA0A1B0GTK4 181 aa13.48□□□□□ -0.25
RFX1-207ENST00000589937 ZNF840PA6NDX5 716 aa13.48□□□□□ -0.25
RFX1-207ENST00000589937 LEFTY2O00292 366 aa13.48□□□□□ -0.25
RFX1-207ENST00000589937 TRIM66O15016 1216 aa13.48□□□□□ -0.25
RFX1-207ENST00000589937 ABL1P00519 1130 aa13.48□□□□□ -0.25
RFX1-207ENST00000589937 PDIA4P13667 645 aaKnown RBP13.48□□□□□ -0.25
RFX1-207ENST00000589937 HDCP19113 662 aa13.48□□□□□ -0.25
RFX1-207ENST00000589937 TGM1P22735 817 aa13.48□□□□□ -0.25
RFX1-207ENST00000589937 ATICP31939 592 aa13.48□□□□□ -0.25
RFX1-207ENST00000589937 PIK3CAP42336 1068 aa13.48□□□□□ -0.25
RFX1-207ENST00000589937 ASPAP45381 313 aa13.48□□□□□ -0.25
RFX1-207ENST00000589937 IFNAR2P48551 515 aa13.48□□□□□ -0.25
RFX1-207ENST00000589937 PGFP49763 221 aa13.48□□□□□ -0.25
RFX1-207ENST00000589937 NOP14P78316 857 aaKnown RBP13.48□□□□□ -0.25
RFX1-207ENST00000589937 MESP2Q0VG99 397 aa13.48□□□□□ -0.25
RFX1-207ENST00000589937 TAF10Q12962 218 aa13.48□□□□□ -0.25
RFX1-207ENST00000589937 MAPRE1Q15691 268 aaKnown RBP13.48□□□□□ -0.25
RFX1-207ENST00000589937 GAB4Q2WGN9 574 aa13.48□□□□□ -0.25
RFX1-207ENST00000589937 ZACNQ401N2 412 aa13.48□□□□□ -0.25
RFX1-207ENST00000589937 ZNF667Q5HYK9 610 aa13.48□□□□□ -0.25
RFX1-207ENST00000589937 C1orf228Q6PIY5 440 aa13.48□□□□□ -0.25
RFX1-207ENST00000589937 MAMSTRQ6ZN01 415 aa13.48□□□□□ -0.25
RFX1-207ENST00000589937 ACOT1Q86TX2 421 aa13.48□□□□□ -0.25
RFX1-207ENST00000589937 SLC9A9Q8IVB4 645 aa13.48□□□□□ -0.25
RFX1-207ENST00000589937 SCAMP5Q8TAC9 235 aa13.48□□□□□ -0.25
RFX1-207ENST00000589937 GOLGA5Q8TBA6 731 aa13.48□□□□□ -0.25
RFX1-207ENST00000589937 OSCP1Q8WVF1 389 aa13.48□□□□□ -0.25
RFX1-207ENST00000589937 EEF2KMTQ96G04 330 aa13.48□□□□□ -0.25
RFX1-207ENST00000589937 C8orf48Q96LL4 319 aa13.48□□□□□ -0.25
RFX1-207ENST00000589937 HHIPQ96QV1 700 aa13.48□□□□□ -0.25
RFX1-207ENST00000589937 TWNKQ96RR1 684 aa13.48□□□□□ -0.25
RFX1-207ENST00000589937 FAM126AQ9BYI3 521 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms