RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	USP13	Q92995	863 aa	Predicted RBP	18.38	■□□□□ 0.53
MBD1-221	ENST00000589867	HNRNPAB	Q99729	332 aa	Known RBP	18.38	■□□□□ 0.53
MBD1-221	ENST00000589867	DDX23	Q9BUQ8	820 aa	Known RBP	18.38	■□□□□ 0.53
MBD1-221	ENST00000589867	NT5C1A	Q9BXI3	368 aa		18.38	■□□□□ 0.53
MBD1-221	ENST00000589867	KRT82	Q9NSB4	513 aa		18.38	■□□□□ 0.53
MBD1-221	ENST00000589867	C2orf78	A6NCI8	922 aa		18.37	■□□□□ 0.53
MBD1-221	ENST00000589867	GNA14	O95837	355 aa		18.37	■□□□□ 0.53
MBD1-221	ENST00000589867	PSMC3	P17980	439 aa		18.37	■□□□□ 0.53
MBD1-221	ENST00000589867	STARD6	P59095	220 aa		18.37	■□□□□ 0.53
MBD1-221	ENST00000589867	ZXDB	P98169	803 aa		18.37	■□□□□ 0.53
MBD1-221	ENST00000589867	LRMP	Q12912	555 aa		18.37	■□□□□ 0.53
MBD1-221	ENST00000589867	CUL2	Q13617	745 aa		18.37	■□□□□ 0.53
MBD1-221	ENST00000589867	SLC44A4	Q53GD3	710 aa		18.37	■□□□□ 0.53
MBD1-221	ENST00000589867	ZNF394	Q53GI3	561 aa		18.37	■□□□□ 0.53
MBD1-221	ENST00000589867	ARHGAP15	Q53QZ3	475 aa		18.37	■□□□□ 0.53
MBD1-221	ENST00000589867	SCAMP5	Q8TAC9	235 aa		18.37	■□□□□ 0.53
MBD1-221	ENST00000589867	DEPDC1B	Q8WUY9	529 aa		18.37	■□□□□ 0.53
MBD1-221	ENST00000589867	SMARCD1	Q96GM5	515 aa		18.37	■□□□□ 0.53
MBD1-221	ENST00000589867	CYP2S1	Q96SQ9	504 aa		18.37	■□□□□ 0.53
MBD1-221	ENST00000589867	TRMT61B	Q9BVS5	477 aa	Known RBP	18.37	■□□□□ 0.53
MBD1-221	ENST00000589867	TBC1D17	Q9HA65	648 aa		18.37	■□□□□ 0.53
MBD1-221	ENST00000589867	OBP2A	Q9NY56	170 aa		18.37	■□□□□ 0.53
MBD1-221	ENST00000589867	UXT	Q9UBK9	157 aa	Predicted RBP	18.37	■□□□□ 0.53
MBD1-221	ENST00000589867	FAM92A	A1XBS5	289 aa		18.36	■□□□□ 0.53
MBD1-221	ENST00000589867	ZNF840P	A6NDX5	716 aa		18.36	■□□□□ 0.53
MBD1-221	ENST00000589867	SOBP	A7XYQ1	873 aa		18.36	■□□□□ 0.53
MBD1-221	ENST00000589867	AP1G2	O75843	785 aa		18.36	■□□□□ 0.53
MBD1-221	ENST00000589867	ACO1	P21399	889 aa	Known RBP	18.36	■□□□□ 0.53
MBD1-221	ENST00000589867	DDX6	P26196	483 aa	Known RBP eCLIP	18.36	■□□□□ 0.53
MBD1-221	ENST00000589867	GDI1	P31150	447 aa		18.36	■□□□□ 0.53
MBD1-221	ENST00000589867	HELZ	P42694	1942 aa	Known RBP	18.36	■□□□□ 0.53
MBD1-221	ENST00000589867	PGF	P49763	221 aa		18.36	■□□□□ 0.53
MBD1-221	ENST00000589867	CLCN5	P51795	746 aa		18.36	■□□□□ 0.53
MBD1-221	ENST00000589867	TAF10	Q12962	218 aa		18.36	■□□□□ 0.53
MBD1-221	ENST00000589867	MLF2	Q15773	248 aa	Predicted RBP	18.36	■□□□□ 0.53
MBD1-221	ENST00000589867	WDR44	Q5JSH3	913 aa		18.36	■□□□□ 0.53
MBD1-221	ENST00000589867	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	18.36	■□□□□ 0.53
MBD1-221	ENST00000589867	ASTL	Q6HA08	431 aa	Predicted RBP	18.36	■□□□□ 0.53
MBD1-221	ENST00000589867	CLEC20A	Q6ZU45	233 aa		18.36	■□□□□ 0.53
MBD1-221	ENST00000589867	GPRIN1	Q7Z2K8	1008 aa		18.36	■□□□□ 0.53
MBD1-221	ENST00000589867	CCDC150	Q8NCX0	1101 aa		18.36	■□□□□ 0.53
MBD1-221	ENST00000589867	PRSS33	Q8NF86	280 aa		18.36	■□□□□ 0.53
MBD1-221	ENST00000589867	FLCN	Q8NFG4	579 aa		18.36	■□□□□ 0.53
MBD1-221	ENST00000589867	MRPS31	Q92665	395 aa	Known RBP	18.36	■□□□□ 0.53
MBD1-221	ENST00000589867	CNOT6L	Q96LI5	555 aa	Known RBP	18.36	■□□□□ 0.53
MBD1-221	ENST00000589867	GCNA	Q96QF7	691 aa		18.36	■□□□□ 0.53
MBD1-221	ENST00000589867	MED10	Q9BTT4	135 aa		18.36	■□□□□ 0.53
MBD1-221	ENST00000589867	DMAP1	Q9NPF5	467 aa	Predicted RBP	18.36	■□□□□ 0.53
MBD1-221	ENST00000589867	CACNA1I	Q9P0X4	2223 aa		18.35	■□□□□ 0.53
MBD1-221	ENST00000589867	P4HA2	O15460	535 aa		18.35	■□□□□ 0.53
MBD1-221	ENST00000589867	AOC1	P19801	751 aa		18.35	■□□□□ 0.53
MBD1-221	ENST00000589867	ANXA13	P27216	316 aa		18.35	■□□□□ 0.53
MBD1-221	ENST00000589867	ADORA2B	P29275	332 aa		18.35	■□□□□ 0.53
MBD1-221	ENST00000589867	SLC5A3	P53794	718 aa		18.35	■□□□□ 0.53
MBD1-221	ENST00000589867	PHLDB3	Q6NSJ2	640 aa		18.35	■□□□□ 0.53
MBD1-221	ENST00000589867	ARHGEF19	Q8IW93	802 aa		18.35	■□□□□ 0.53
MBD1-221	ENST00000589867	SUGP1	Q8IWZ8	645 aa	Known RBP	18.35	■□□□□ 0.53
MBD1-221	ENST00000589867	NUP93	Q8N1F7	819 aa		18.35	■□□□□ 0.53
MBD1-221	ENST00000589867	ZNF687	Q8N1G0	1237 aa		18.35	■□□□□ 0.53
MBD1-221	ENST00000589867	E2F7	Q96AV8	911 aa		18.35	■□□□□ 0.53
MBD1-221	ENST00000589867	CYFIP2	Q96F07	1278 aa		18.35	■□□□□ 0.53
MBD1-221	ENST00000589867	ZFYVE19	Q96K21	471 aa		18.35	■□□□□ 0.53
MBD1-221	ENST00000589867	FOXQ1	Q9C009	403 aa		18.35	■□□□□ 0.53
MBD1-221	ENST00000589867	TRPV5	Q9NQA5	729 aa		18.35	■□□□□ 0.53
MBD1-221	ENST00000589867	HEBP1	Q9NRV9	189 aa		18.35	■□□□□ 0.53
MBD1-221	ENST00000589867	DLGAP2	Q9P1A6	1054 aa		18.35	■□□□□ 0.53
MBD1-221	ENST00000589867	MTF2	Q9Y483	593 aa	Predicted RBP	18.35	■□□□□ 0.53
MBD1-221	ENST00000589867	DMD	P11532	3685 aa		18.35	■□□□□ 0.53
MBD1-221	ENST00000589867	ATP8B3	O60423	1300 aa		18.34	■□□□□ 0.53
MBD1-221	ENST00000589867	RNF225	M0QZC1	329 aa	Predicted RBP	18.34	■□□□□ 0.53
MBD1-221	ENST00000589867	CHAD	O15335	359 aa		18.34	■□□□□ 0.53
MBD1-221	ENST00000589867	OLFM2	O95897	454 aa		18.34	■□□□□ 0.53
MBD1-221	ENST00000589867	AFP	P02771	609 aa	Known RBP	18.34	■□□□□ 0.53
MBD1-221	ENST00000589867	GLUL	P15104	373 aa		18.34	■□□□□ 0.53
MBD1-221	ENST00000589867	CD72	P21854	359 aa		18.34	■□□□□ 0.53
MBD1-221	ENST00000589867	MAP3K7CL	P57077	242 aa		18.34	■□□□□ 0.53
MBD1-221	ENST00000589867	PFKP	Q01813	784 aa		18.34	■□□□□ 0.53
MBD1-221	ENST00000589867	CELF5	Q8N6W0	485 aa	Known RBP	18.34	■□□□□ 0.53
MBD1-221	ENST00000589867	ARL14EP	Q8N8R7	260 aa	Predicted RBP	18.34	■□□□□ 0.53
MBD1-221	ENST00000589867	EHBP1	Q8NDI1	1231 aa		18.34	■□□□□ 0.53
MBD1-221	ENST00000589867	DNASE1L2	Q92874	299 aa		18.34	■□□□□ 0.53
MBD1-221	ENST00000589867	TMEM176A	Q96HP8	235 aa		18.34	■□□□□ 0.53
MBD1-221	ENST00000589867	KREMEN1	Q96MU8	473 aa		18.34	■□□□□ 0.53
MBD1-221	ENST00000589867	RNF38	Q9H0F5	515 aa		18.34	■□□□□ 0.53
MBD1-221	ENST00000589867	FAM124B	Q9H5Z6	455 aa	Predicted RBP	18.34	■□□□□ 0.53
MBD1-221	ENST00000589867	BRD9	Q9H8M2	597 aa		18.34	■□□□□ 0.53
MBD1-221	ENST00000589867	ZMYM5	Q9UJ78	669 aa		18.34	■□□□□ 0.53
MBD1-221	ENST00000589867	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	18.34	■□□□□ 0.53	2e-6	■■□□□ 12
MBD1-221	ENST00000589867	MIA3	Q5JRA6	1907 aa		18.33	■□□□□ 0.53
MBD1-221	ENST00000589867	OAS1	P00973	400 aa	Known RBP	18.33	■□□□□ 0.52
MBD1-221	ENST00000589867	ZDHHC11B	P0C7U3	371 aa		18.33	■□□□□ 0.52
MBD1-221	ENST00000589867	CCDC192	P0DO97	292 aa		18.33	■□□□□ 0.52
MBD1-221	ENST00000589867	ERCC5	P28715	1186 aa	Predicted RBP	18.33	■□□□□ 0.52
MBD1-221	ENST00000589867	PRKCQ	Q04759	706 aa		18.33	■□□□□ 0.52
MBD1-221	ENST00000589867	TCF15	Q12870	199 aa		18.33	■□□□□ 0.52
MBD1-221	ENST00000589867	FZD5	Q13467	585 aa		18.33	■□□□□ 0.52
MBD1-221	ENST00000589867	ZNF268	Q14587	947 aa	Predicted RBP	18.33	■□□□□ 0.52
MBD1-221	ENST00000589867	ARHGAP17	Q68EM7	881 aa		18.33	■□□□□ 0.52
MBD1-221	ENST00000589867	BPIFB1	Q8TDL5	484 aa		18.33	■□□□□ 0.52
MBD1-221	ENST00000589867	CHFR	Q96EP1	664 aa		18.33	■□□□□ 0.52

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