RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 TWF1Q12792 350 aa22.54■■□□□ 1.2
R3HDM4-204ENST00000589428 MAPK8IP2Q13387 824 aaPredicted RBP22.54■■□□□ 1.2
R3HDM4-204ENST00000589428 SMAD2Q15796 467 aaKnown RBP22.54■■□□□ 1.2
R3HDM4-204ENST00000589428 CFAP221Q4G0U5 840 aa22.54■■□□□ 1.2
R3HDM4-204ENST00000589428 SMYD5Q6GMV2 418 aa22.54■■□□□ 1.2
R3HDM4-204ENST00000589428 TTC9BQ8N6N2 239 aa22.54■■□□□ 1.2
R3HDM4-204ENST00000589428 PCED1BQ96HM7 432 aa22.54■■□□□ 1.2
R3HDM4-204ENST00000589428 TWNKQ96RR1 684 aa22.54■■□□□ 1.2
R3HDM4-204ENST00000589428 CDH22Q9UJ99 828 aa22.54■■□□□ 1.2
R3HDM4-204ENST00000589428 NOCTQ9UK39 431 aaKnown RBP22.54■■□□□ 1.2
R3HDM4-204ENST00000589428 SSU72P8A0A1W2PR75 194 aa22.54■■□□□ 1.2
R3HDM4-204ENST00000589428 IL9P15248 144 aa22.54■■□□□ 1.2
R3HDM4-204ENST00000589428 CYP11B1P15538 503 aa22.54■■□□□ 1.2
R3HDM4-204ENST00000589428 ORC1Q13415 861 aa22.54■■□□□ 1.2
R3HDM4-204ENST00000589428 ZNF394Q53GI3 561 aa22.54■■□□□ 1.2
R3HDM4-204ENST00000589428 ACOT1Q86TX2 421 aa22.54■■□□□ 1.2
R3HDM4-204ENST00000589428 NOP9Q86U38 636 aaKnown RBP22.54■■□□□ 1.2
R3HDM4-204ENST00000589428 SLC20A1Q8WUM9 679 aa22.54■■□□□ 1.2
R3HDM4-204ENST00000589428 ELOVL4Q9GZR5 314 aa22.54■■□□□ 1.2
R3HDM4-204ENST00000589428 UNC80Q8N2C7 3258 aa22.53■■□□□ 1.2
R3HDM4-204ENST00000589428 HAPLN1P10915 354 aaPredicted RBP22.53■■□□□ 1.2
R3HDM4-204ENST00000589428 PDE6CP51160 858 aa22.53■■□□□ 1.2
R3HDM4-204ENST00000589428 EPHB3P54753 998 aa22.53■■□□□ 1.2
R3HDM4-204ENST00000589428 ASTE1Q2TB18 679 aaPredicted RBP22.53■■□□□ 1.2
R3HDM4-204ENST00000589428 CCDC42Q96M95 316 aa22.53■■□□□ 1.2
R3HDM4-204ENST00000589428 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.53■■□□□ 1.2
R3HDM4-204ENST00000589428 ATP8B3O60423 1300 aa22.52■■□□□ 1.2
R3HDM4-204ENST00000589428 RAD23BP54727 409 aa22.52■■□□□ 1.2
R3HDM4-204ENST00000589428 VEPH1Q14D04 833 aa22.52■■□□□ 1.2
R3HDM4-204ENST00000589428 TJAP1Q5JTD0 557 aa22.52■■□□□ 1.2
R3HDM4-204ENST00000589428 TOGARAM2Q6ZUX3 1019 aa22.52■■□□□ 1.2
R3HDM4-204ENST00000589428 CRYBG2Q8N1P7 616 aa22.52■■□□□ 1.2
R3HDM4-204ENST00000589428 FEZF2Q8TBJ5 459 aa22.52■■□□□ 1.2
R3HDM4-204ENST00000589428 ZKSCAN5Q9Y2L8 839 aa22.52■■□□□ 1.2
R3HDM4-204ENST00000589428 C2orf16Q68DN1 1984 aa22.52■■□□□ 1.2
R3HDM4-204ENST00000589428 SOAT2O75908 522 aa22.51■■□□□ 1.19
R3HDM4-204ENST00000589428 CYP2F1P24903 491 aa22.51■■□□□ 1.19
R3HDM4-204ENST00000589428 KIF11P52732 1056 aa22.51■■□□□ 1.19
R3HDM4-204ENST00000589428 BPIFB4P59827 614 aa22.51■■□□□ 1.19
R3HDM4-204ENST00000589428 CCDC170Q8IYT3 715 aa22.51■■□□□ 1.19
R3HDM4-204ENST00000589428 SLC4A11Q8NBS3 891 aa22.51■■□□□ 1.19
R3HDM4-204ENST00000589428 DDX1Q92499 740 aaKnown RBP22.51■■□□□ 1.19
R3HDM4-204ENST00000589428 ZNF512Q96ME7 567 aaPredicted RBP22.51■■□□□ 1.19
R3HDM4-204ENST00000589428 LPIN3Q9BQK8 851 aa22.51■■□□□ 1.19
R3HDM4-204ENST00000589428 MED10Q9BTT4 135 aa22.51■■□□□ 1.19
R3HDM4-204ENST00000589428 DEF6Q9H4E7 631 aa22.51■■□□□ 1.19
R3HDM4-204ENST00000589428 SPTLC3Q9NUV7 552 aa22.51■■□□□ 1.19
R3HDM4-204ENST00000589428 NDUFA10O95299 355 aa22.51■■□□□ 1.19
R3HDM4-204ENST00000589428 CHRNB2P17787 502 aa22.51■■□□□ 1.19
R3HDM4-204ENST00000589428 BDNFP23560 247 aa22.51■■□□□ 1.19
R3HDM4-204ENST00000589428 GNA15P30679 374 aa22.51■■□□□ 1.19
R3HDM4-204ENST00000589428 MAGEA11P43364 429 aa22.51■■□□□ 1.19
R3HDM4-204ENST00000589428 RPL10AP62906 217 aaKnown RBP22.51■■□□□ 1.19
R3HDM4-204ENST00000589428 TAF3Q5VWG9 929 aa22.51■■□□□ 1.19
R3HDM4-204ENST00000589428 VSTM1Q6UX27 236 aa22.51■■□□□ 1.19
R3HDM4-204ENST00000589428 GRASPQ7Z6J2 395 aaPredicted RBP22.51■■□□□ 1.19
R3HDM4-204ENST00000589428 DESI2Q9BSY9 194 aa22.51■■□□□ 1.19
R3HDM4-204ENST00000589428 POMKQ9H5K3 350 aa22.51■■□□□ 1.19
R3HDM4-204ENST00000589428 EPN1Q9Y6I3 576 aaPredicted RBP22.51■■□□□ 1.19
R3HDM4-204ENST00000589428 CLUHO75153 1309 aa22.5■■□□□ 1.19
R3HDM4-204ENST00000589428 ANXA13P27216 316 aa22.5■■□□□ 1.19
R3HDM4-204ENST00000589428 ITIH5Q86UX2 942 aa22.5■■□□□ 1.19
R3HDM4-204ENST00000589428 SCN4BQ8IWT1 228 aa22.5■■□□□ 1.19
R3HDM4-204ENST00000589428 TMEM176AQ96HP8 235 aa22.5■■□□□ 1.19
R3HDM4-204ENST00000589428 AGPAT1Q99943 283 aa22.5■■□□□ 1.19
R3HDM4-204ENST00000589428 ZSWIM1Q9BR11 485 aa22.5■■□□□ 1.19
R3HDM4-204ENST00000589428 WDR6Q9NNW5 1121 aaKnown RBP22.5■■□□□ 1.19
R3HDM4-204ENST00000589428 FAM49BQ9NUQ9 324 aa22.5■■□□□ 1.19
R3HDM4-204ENST00000589428 ADAMTS1Q9UHI8 967 aa22.5■■□□□ 1.19
R3HDM4-204ENST00000589428 ASB3Q9Y575 518 aa22.5■■□□□ 1.19
R3HDM4-204ENST00000589428 A0A087X0T9 212 aa22.49■■□□□ 1.19
R3HDM4-204ENST00000589428 AKR1B10O60218 316 aa22.49■■□□□ 1.19
R3HDM4-204ENST00000589428 PAEPP09466 180 aa22.49■■□□□ 1.19
R3HDM4-204ENST00000589428 FAM228BP0C875 321 aa22.49■■□□□ 1.19
R3HDM4-204ENST00000589428 BMP1P13497 986 aa22.49■■□□□ 1.19
R3HDM4-204ENST00000589428 CCDC130P13994 396 aa22.49■■□□□ 1.19
R3HDM4-204ENST00000589428 PTPN2P17706 415 aa22.49■■□□□ 1.19
R3HDM4-204ENST00000589428 ATF6P18850 670 aa22.49■■□□□ 1.19
R3HDM4-204ENST00000589428 CYLC1P35663 651 aaPredicted RBP22.49■■□□□ 1.19
R3HDM4-204ENST00000589428 CDR2Q01850 454 aa22.49■■□□□ 1.19
R3HDM4-204ENST00000589428 GFPT1Q06210 699 aaPredicted RBP22.49■■□□□ 1.19
R3HDM4-204ENST00000589428 TAF12Q16514 161 aa22.49■■□□□ 1.19
R3HDM4-204ENST00000589428 PABPC1LQ4VXU2 614 aaKnown RBP22.49■■□□□ 1.19
R3HDM4-204ENST00000589428 TFAP2BQ92481 460 aa22.49■■□□□ 1.19
R3HDM4-204ENST00000589428 CORO1BQ9BR76 489 aa22.49■■□□□ 1.19
R3HDM4-204ENST00000589428 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.49■■□□□ 1.19
R3HDM4-204ENST00000589428 B3GNT5Q9BYG0 378 aa22.49■■□□□ 1.19
R3HDM4-204ENST00000589428 ZNF518BQ9C0D4 1074 aa22.49■■□□□ 1.19
R3HDM4-204ENST00000589428 DDX3XO00571 662 aaKnown RBP eCLIP22.48■■□□□ 1.192e-9■■□□□ 13.7
R3HDM4-204ENST00000589428 ZNF263O14978 683 aa22.48■■□□□ 1.19
R3HDM4-204ENST00000589428 MMEP08473 750 aa22.48■■□□□ 1.19
R3HDM4-204ENST00000589428 BRD2P25440 801 aaKnown RBP22.48■■□□□ 1.19
R3HDM4-204ENST00000589428 GRIK1P39086 918 aa22.48■■□□□ 1.19
R3HDM4-204ENST00000589428 FMO1Q01740 532 aa22.48■■□□□ 1.19
R3HDM4-204ENST00000589428 FAM35AQ86V20 835 aa22.48■■□□□ 1.19
R3HDM4-204ENST00000589428 C12orf29Q8N999 325 aa22.48■■□□□ 1.19
R3HDM4-204ENST00000589428 ACRBPQ8NEB7 543 aa22.48■■□□□ 1.19
R3HDM4-204ENST00000589428 SLC30A5Q8TAD4 765 aa22.48■■□□□ 1.19
R3HDM4-204ENST00000589428 SLC2A14Q8TDB8 520 aa22.48■■□□□ 1.19
R3HDM4-204ENST00000589428 SMARCD1Q96GM5 515 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms