RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 PYGMP11217 842 aa12.69□□□□□ -0.38
CCBE1-203ENST00000589116 NPR3P17342 541 aa12.69□□□□□ -0.38
CCBE1-203ENST00000589116 ACAT1P24752 427 aaKnown RBP12.69□□□□□ -0.38
CCBE1-203ENST00000589116 PSMA2P25787 234 aa12.69□□□□□ -0.38
CCBE1-203ENST00000589116 TKTP29401 623 aaKnown RBP12.69□□□□□ -0.38
CCBE1-203ENST00000589116 BRCC3P46736 316 aa12.69□□□□□ -0.38
CCBE1-203ENST00000589116 RGS7P49802 495 aa12.69□□□□□ -0.38
CCBE1-203ENST00000589116 CCL23P55773 120 aa12.69□□□□□ -0.38
CCBE1-203ENST00000589116 OGDHQ02218 1023 aa12.69□□□□□ -0.38
CCBE1-203ENST00000589116 LONRF2Q1L5Z9 754 aa12.69□□□□□ -0.38
CCBE1-203ENST00000589116 MDH1BQ5I0G3 518 aa12.69□□□□□ -0.38
CCBE1-203ENST00000589116 FAM109BQ6ICB4 259 aaPredicted RBP12.69□□□□□ -0.38
CCBE1-203ENST00000589116 OR6B2Q6IFH4 312 aa12.69□□□□□ -0.38
CCBE1-203ENST00000589116 C8orf74Q6P047 294 aa12.69□□□□□ -0.38
CCBE1-203ENST00000589116 WDR93Q6P2C0 686 aa12.69□□□□□ -0.38
CCBE1-203ENST00000589116 OLFML1Q6UWY5 402 aa12.69□□□□□ -0.38
CCBE1-203ENST00000589116 POLNQ7Z5Q5 900 aa12.69□□□□□ -0.38
CCBE1-203ENST00000589116 ZNF280BQ86YH2 543 aa12.69□□□□□ -0.38
CCBE1-203ENST00000589116 CRIPAKQ8N1N5 446 aa12.69□□□□□ -0.38
CCBE1-203ENST00000589116 JOSD2Q8TAC2 188 aa12.69□□□□□ -0.38
CCBE1-203ENST00000589116 MYCBPAPQ8TBZ2 947 aa12.69□□□□□ -0.38
CCBE1-203ENST00000589116 LPIN3Q9BQK8 851 aa12.69□□□□□ -0.38
CCBE1-203ENST00000589116 PARD6BQ9BYG5 372 aa12.69□□□□□ -0.38
CCBE1-203ENST00000589116 CRTAC1Q9NQ79 661 aa12.69□□□□□ -0.38
CCBE1-203ENST00000589116 RAPGEFL1Q9UHV5 662 aa12.69□□□□□ -0.38
CCBE1-203ENST00000589116 ATP11BQ9Y2G3 1177 aa12.69□□□□□ -0.38
CCBE1-203ENST00000589116 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.68□□□□□ -0.38
CCBE1-203ENST00000589116 CCDC151A5D8V7 595 aa12.68□□□□□ -0.38
CCBE1-203ENST00000589116 TULP2O00295 520 aa12.68□□□□□ -0.38
CCBE1-203ENST00000589116 B4GALT3O60512 393 aa12.68□□□□□ -0.38
CCBE1-203ENST00000589116 ATP2C2O75185 946 aa12.68□□□□□ -0.38
CCBE1-203ENST00000589116 FAM200BP0CF97 657 aa12.68□□□□□ -0.38
CCBE1-203ENST00000589116 DESP17661 470 aa12.68□□□□□ -0.38
CCBE1-203ENST00000589116 CYP2C18P33260 490 aa12.68□□□□□ -0.38
CCBE1-203ENST00000589116 ZNF143P52747 638 aaPredicted RBP12.68□□□□□ -0.38
CCBE1-203ENST00000589116 TAS2R40P59535 323 aa12.68□□□□□ -0.38
CCBE1-203ENST00000589116 RNASE9P60153 205 aaKnown RBP12.68□□□□□ -0.38
CCBE1-203ENST00000589116 SLC6A3Q01959 620 aa12.68□□□□□ -0.38
CCBE1-203ENST00000589116 ZNF211Q13398 564 aaPredicted RBP12.68□□□□□ -0.38
CCBE1-203ENST00000589116 BRD3Q15059 726 aa12.68□□□□□ -0.38
CCBE1-203ENST00000589116 MAPRE1Q15691 268 aaKnown RBP12.68□□□□□ -0.38
CCBE1-203ENST00000589116 PAN2Q504Q3 1202 aaKnown RBP12.68□□□□□ -0.38
CCBE1-203ENST00000589116 INTS6LQ5JSJ4 861 aaKnown RBP12.68□□□□□ -0.38
CCBE1-203ENST00000589116 KIAA0319Q5VV43 1072 aa12.68□□□□□ -0.38
CCBE1-203ENST00000589116 OVOS1Q6IE37 1185 aa12.68□□□□□ -0.38
CCBE1-203ENST00000589116 CC2D1AQ6P1N0 951 aaPredicted RBP12.68□□□□□ -0.38
CCBE1-203ENST00000589116 CNKSR3Q6P9H4 555 aa12.68□□□□□ -0.38
CCBE1-203ENST00000589116 FBXO38Q6PIJ6 1188 aa12.68□□□□□ -0.38
CCBE1-203ENST00000589116 ARCQ7LC44 396 aa12.68□□□□□ -0.38
CCBE1-203ENST00000589116 FAM35AQ86V20 835 aa12.68□□□□□ -0.38
CCBE1-203ENST00000589116 THEM5Q8N1Q8 247 aa12.68□□□□□ -0.38
CCBE1-203ENST00000589116 EXD1Q8NHP7 514 aa12.68□□□□□ -0.38
CCBE1-203ENST00000589116 MAFAQ8NHW3 353 aaPredicted RBP12.68□□□□□ -0.38
CCBE1-203ENST00000589116 MAIP1Q8WWC4 291 aa12.68□□□□□ -0.38
CCBE1-203ENST00000589116 KCTD13Q8WZ19 329 aa12.68□□□□□ -0.38
CCBE1-203ENST00000589116 CASD1Q96PB1 797 aa12.68□□□□□ -0.38
CCBE1-203ENST00000589116 NCAPGQ9BPX3 1015 aa12.68□□□□□ -0.38
CCBE1-203ENST00000589116 MED10Q9BTT4 135 aa12.68□□□□□ -0.38
CCBE1-203ENST00000589116 SLITRK6Q9H5Y7 841 aa12.68□□□□□ -0.38
CCBE1-203ENST00000589116 TMEM39AQ9NV64 488 aa12.68□□□□□ -0.38
CCBE1-203ENST00000589116 USTQ9Y2C2 406 aa12.68□□□□□ -0.38
CCBE1-203ENST00000589116 TIMM13Q9Y5L4 95 aaPredicted RBP12.68□□□□□ -0.38
CCBE1-203ENST00000589116 LTBP2Q14767 1821 aa12.68□□□□□ -0.38
CCBE1-203ENST00000589116 FNDC1Q4ZHG4 1894 aaPredicted RBP12.68□□□□□ -0.38
CCBE1-203ENST00000589116 C2CD4BA6NLJ0 364 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 F8VP50 259 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 DPYSL4O14531 572 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 PAPSS1O43252 624 aaPredicted RBP12.67□□□□□ -0.38
CCBE1-203ENST00000589116 ITGB1P05556 798 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 GPD1P21695 349 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 CETN2P41208 172 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 OR1G1P47890 313 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 HADHQ16836 314 aaKnown RBP12.67□□□□□ -0.38
CCBE1-203ENST00000589116 TCTN1Q2MV58 587 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 ZNF697Q5TEC3 545 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 FAM171BQ6P995 826 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 CLEC20AQ6ZU45 233 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 PAQR9Q6ZVX9 377 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 SLC26A9Q7LBE3 791 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 SLC13A5Q86YT5 568 aaPredicted RBP12.67□□□□□ -0.38
CCBE1-203ENST00000589116 HASPINQ8TF76 798 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 RBM41Q96IZ5 413 aaKnown RBP12.67□□□□□ -0.38
CCBE1-203ENST00000589116 RTP3Q9BQQ7 232 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 TMEM175Q9BSA9 504 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 CNPY3Q9BT09 278 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 B3GNT5Q9BYG0 378 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 UBXN6Q9BZV1 441 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 EPC1Q9H2F5 836 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 ASNSD1Q9NWL6 643 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 DDX56Q9NY93 547 aaKnown RBP12.67□□□□□ -0.38
CCBE1-203ENST00000589116 MTUS1Q9ULD2 1270 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 VCANP13611 3396 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 I3L4J1 428 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 SYN3O14994 580 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 ERLIN1O75477 346 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 RNF8O76064 485 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 ZRANB2O95218 330 aaKnown RBP eCLIP12.67□□□□□ -0.38
CCBE1-203ENST00000589116 KRT7P08729 469 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 PCK1P35558 622 aa12.67□□□□□ -0.38
CCBE1-203ENST00000589116 SSR1P43307 286 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms