RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 SCAMP3O14828 347 aaKnown RBP23.36■■□□□ 1.33
CAPNS1-205ENST00000588780 KAT7O95251 611 aa23.36■■□□□ 1.33
CAPNS1-205ENST00000588780 ZIC2O95409 532 aaPredicted RBP23.36■■□□□ 1.33
CAPNS1-205ENST00000588780 CYP17A1P05093 508 aa23.36■■□□□ 1.33
CAPNS1-205ENST00000588780 SCP2P22307 547 aa23.36■■□□□ 1.33
CAPNS1-205ENST00000588780 PNPLA4P41247 253 aa23.36■■□□□ 1.33
CAPNS1-205ENST00000588780 TOB1P50616 345 aaPredicted RBP23.36■■□□□ 1.33
CAPNS1-205ENST00000588780 KDSRQ06136 332 aa23.36■■□□□ 1.33
CAPNS1-205ENST00000588780 RESTQ13127 1097 aa23.36■■□□□ 1.33
CAPNS1-205ENST00000588780 TRIP6Q15654 476 aaKnown RBP23.36■■□□□ 1.33
CAPNS1-205ENST00000588780 HSF5Q4G112 596 aaPredicted RBP23.36■■□□□ 1.33
CAPNS1-205ENST00000588780 INTS6LQ5JSJ4 861 aaKnown RBP23.36■■□□□ 1.33
CAPNS1-205ENST00000588780 SLC39A4Q6P5W5 647 aa23.36■■□□□ 1.33
CAPNS1-205ENST00000588780 FILIP1Q7Z7B0 1213 aa23.36■■□□□ 1.33
CAPNS1-205ENST00000588780 GPBP1Q86WP2 473 aa23.36■■□□□ 1.33
CAPNS1-205ENST00000588780 SFTPA1Q8IWL2 248 aa23.36■■□□□ 1.33
CAPNS1-205ENST00000588780 REEP2Q9BRK0 252 aa23.36■■□□□ 1.33
CAPNS1-205ENST00000588780 ARHGEF4Q9NR80 690 aa23.36■■□□□ 1.33
CAPNS1-205ENST00000588780 AGO2Q9UKV8 859 aaKnown RBP23.36■■□□□ 1.33
CAPNS1-205ENST00000588780 ANKRD63C9JTQ0 380 aa23.35■■□□□ 1.33
CAPNS1-205ENST00000588780 TRAK2O60296 914 aa23.35■■□□□ 1.33
CAPNS1-205ENST00000588780 ABL1P00519 1130 aa23.35■■□□□ 1.33
CAPNS1-205ENST00000588780 SYPP08247 313 aa23.35■■□□□ 1.33
CAPNS1-205ENST00000588780 ATP2C1P98194 919 aaPredicted RBP23.35■■□□□ 1.33
CAPNS1-205ENST00000588780 TFAMQ00059 246 aaKnown RBP23.35■■□□□ 1.33
CAPNS1-205ENST00000588780 ARSHQ5FYA8 562 aa23.35■■□□□ 1.33
CAPNS1-205ENST00000588780 SLFN12LQ6IEE8 588 aa23.35■■□□□ 1.33
CAPNS1-205ENST00000588780 SLC36A4Q6YBV0 504 aa23.35■■□□□ 1.33
CAPNS1-205ENST00000588780 CAMK1GQ96NX5 476 aa23.35■■□□□ 1.33
CAPNS1-205ENST00000588780 PARVGQ9HBI0 331 aa23.35■■□□□ 1.33
CAPNS1-205ENST00000588780 TRPM5Q9NZQ8 1165 aa23.35■■□□□ 1.33
CAPNS1-205ENST00000588780 AGAP1Q9UPQ3 857 aa23.35■■□□□ 1.33
CAPNS1-205ENST00000588780 GCN1Q92616 2671 aaKnown RBP23.34■■□□□ 1.33
CAPNS1-205ENST00000588780 ARHGAP33O14559 1287 aa23.34■■□□□ 1.33
CAPNS1-205ENST00000588780 SLC9A3R1O14745 358 aaPredicted RBP23.34■■□□□ 1.33
CAPNS1-205ENST00000588780 ZBTB24O43167 697 aaPredicted RBP23.34■■□□□ 1.33
CAPNS1-205ENST00000588780 TCF3P15923 654 aa23.34■■□□□ 1.33
CAPNS1-205ENST00000588780 POLR2BP30876 1174 aaKnown RBP23.34■■□□□ 1.33
CAPNS1-205ENST00000588780 DHCR24Q15392 516 aa23.34■■□□□ 1.33
CAPNS1-205ENST00000588780 HYIQ5T013 277 aa23.34■■□□□ 1.33
CAPNS1-205ENST00000588780 KCTD17Q8N5Z5 321 aa23.34■■□□□ 1.33
CAPNS1-205ENST00000588780 PNPLA1Q8N8W4 532 aa23.34■■□□□ 1.33
CAPNS1-205ENST00000588780 SMPD4Q9NXE4 827 aa23.34■■□□□ 1.33
CAPNS1-205ENST00000588780 L1RE1Q9UN81 338 aa23.34■■□□□ 1.33
CAPNS1-205ENST00000588780 ITPR1Q14643 2758 aa23.34■■□□□ 1.33
CAPNS1-205ENST00000588780 PTPRDP23468 1912 aa23.33■■□□□ 1.33
CAPNS1-205ENST00000588780 WDFY3Q8IZQ1 3526 aa23.33■■□□□ 1.33
CAPNS1-205ENST00000588780 VWA3AA6NCI4 1184 aa23.33■■□□□ 1.33
CAPNS1-205ENST00000588780 TISP43B9A030 160 aa23.33■■□□□ 1.33
CAPNS1-205ENST00000588780 SH3BP5O60239 455 aa23.33■■□□□ 1.33
CAPNS1-205ENST00000588780 TBCAO75347 108 aaKnown RBP23.33■■□□□ 1.33
CAPNS1-205ENST00000588780 CD59P13987 128 aa23.33■■□□□ 1.33
CAPNS1-205ENST00000588780 ZNF33AQ06730 810 aa23.33■■□□□ 1.33
CAPNS1-205ENST00000588780 GAB4Q2WGN9 574 aa23.33■■□□□ 1.33
CAPNS1-205ENST00000588780 LRIG1Q96JA1 1093 aa23.33■■□□□ 1.33
CAPNS1-205ENST00000588780 CAPN10Q9HC96 672 aa23.33■■□□□ 1.33
CAPNS1-205ENST00000588780 TNRC6BQ9UPQ9 1833 aaKnown RBP23.32■■□□□ 1.32
CAPNS1-205ENST00000588780 IL18RAPO95256 599 aa23.32■■□□□ 1.32
CAPNS1-205ENST00000588780 ADH1CP00326 375 aa23.32■■□□□ 1.32
CAPNS1-205ENST00000588780 CAPNS1P04632 268 aa23.32■■□□□ 1.32
CAPNS1-205ENST00000588780 ITGB3P05106 788 aa23.32■■□□□ 1.32
CAPNS1-205ENST00000588780 FTH1P19P0C7X4 201 aa23.32■■□□□ 1.32
CAPNS1-205ENST00000588780 GRIA2P42262 883 aa23.32■■□□□ 1.32
CAPNS1-205ENST00000588780 HMGN5P82970 282 aaKnown RBP23.32■■□□□ 1.32
CAPNS1-205ENST00000588780 CCDC142Q17RM4 750 aa23.32■■□□□ 1.32
CAPNS1-205ENST00000588780 PEAR1Q5VY43 1037 aaPredicted RBP23.32■■□□□ 1.32
CAPNS1-205ENST00000588780 RGL4Q8IZJ4 473 aa23.32■■□□□ 1.32
CAPNS1-205ENST00000588780 ADGRG2Q8IZP9 1017 aa23.32■■□□□ 1.32
CAPNS1-205ENST00000588780 TMEM86AQ8N2M4 240 aa23.32■■□□□ 1.32
CAPNS1-205ENST00000588780 POMGNT1Q8WZA1 660 aa23.32■■□□□ 1.32
CAPNS1-205ENST00000588780 LLPHQ9BRT6 129 aaKnown RBP23.32■■□□□ 1.32
CAPNS1-205ENST00000588780 TBC1D3BA6NDS4 549 aa23.31■■□□□ 1.32
CAPNS1-205ENST00000588780 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.31■■□□□ 1.32
CAPNS1-205ENST00000588780 ADAM23O75077 832 aa23.31■■□□□ 1.32
CAPNS1-205ENST00000588780 KRT19P08727 400 aa23.31■■□□□ 1.32
CAPNS1-205ENST00000588780 ANXA13P27216 316 aa23.31■■□□□ 1.32
CAPNS1-205ENST00000588780 PCSK1P29120 753 aa23.31■■□□□ 1.32
CAPNS1-205ENST00000588780 ABCD1P33897 745 aa23.31■■□□□ 1.32
CAPNS1-205ENST00000588780 GRIK1P39086 918 aa23.31■■□□□ 1.32
CAPNS1-205ENST00000588780 MESP2Q0VG99 397 aa23.31■■□□□ 1.32
CAPNS1-205ENST00000588780 PLEKHG6Q3KR16 790 aa23.31■■□□□ 1.32
CAPNS1-205ENST00000588780 CFAP221Q4G0U5 840 aa23.31■■□□□ 1.32
CAPNS1-205ENST00000588780 C4orf50Q6ZRC1 276 aa23.31■■□□□ 1.32
CAPNS1-205ENST00000588780 RASSF8Q8NHQ8 419 aa23.31■■□□□ 1.32
CAPNS1-205ENST00000588780 MDM1Q8TC05 714 aa23.31■■□□□ 1.32
CAPNS1-205ENST00000588780 ADAMTS14Q8WXS8 1223 aa23.31■■□□□ 1.32
CAPNS1-205ENST00000588780 KCNN1Q92952 543 aa23.31■■□□□ 1.32
CAPNS1-205ENST00000588780 FUBP3Q96I24 572 aaKnown RBP eCLIP23.31■■□□□ 1.32
CAPNS1-205ENST00000588780 MAGEC2Q9UBF1 373 aaPredicted RBP23.31■■□□□ 1.32
CAPNS1-205ENST00000588780 LIMCH1Q9UPQ0 1083 aa23.31■■□□□ 1.32
CAPNS1-205ENST00000588780 APOBEC2Q9Y235 224 aaKnown RBP23.31■■□□□ 1.32
CAPNS1-205ENST00000588780 SNX9Q9Y5X1 595 aa23.31■■□□□ 1.32
CAPNS1-205ENST00000588780 CPQQ9Y646 472 aa23.31■■□□□ 1.32
CAPNS1-205ENST00000588780 SETXQ7Z333 2677 aaKnown RBP23.3■■□□□ 1.32
CAPNS1-205ENST00000588780 ADH5P11766 374 aa23.3■■□□□ 1.32
CAPNS1-205ENST00000588780 EIF2DP41214 584 aaKnown RBP23.3■■□□□ 1.32
CAPNS1-205ENST00000588780 TNFRSF4P43489 277 aa23.3■■□□□ 1.32
CAPNS1-205ENST00000588780 KIR2DL1P43626 348 aaPredicted RBP23.3■■□□□ 1.32
CAPNS1-205ENST00000588780 ZXDBP98169 803 aa23.3■■□□□ 1.32
CAPNS1-205ENST00000588780 TRMT11Q7Z4G4 463 aaKnown RBP23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms