RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 SH2D3AQ9BRG2 576 aa7.56□□□□□ -1.2
TPM4-210ENST00000588507 PCED1AQ9H1Q7 454 aa7.56□□□□□ -1.2
TPM4-210ENST00000588507 USP36Q9P275 1121 aaKnown RBP7.56□□□□□ -1.2
TPM4-210ENST00000588507 ARID1BQ8NFD5 2236 aaPredicted RBP7.56□□□□□ -1.2
TPM4-210ENST00000588507 TBC1D3BA6NDS4 549 aa7.55□□□□□ -1.2
TPM4-210ENST00000588507 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.55□□□□□ -1.2
TPM4-210ENST00000588507 INO80B-WBP1J3KQ70 363 aa7.55□□□□□ -1.2
TPM4-210ENST00000588507 ASAP2O43150 1006 aa7.55□□□□□ -1.2
TPM4-210ENST00000588507 TSPAN3O60637 253 aa7.55□□□□□ -1.2
TPM4-210ENST00000588507 TNFSF15O95150 251 aa7.55□□□□□ -1.2
TPM4-210ENST00000588507 SLC6A4P31645 630 aa7.55□□□□□ -1.2
TPM4-210ENST00000588507 KDSRQ06136 332 aa7.55□□□□□ -1.2
TPM4-210ENST00000588507 RESTQ13127 1097 aa7.55□□□□□ -1.2
TPM4-210ENST00000588507 SHBQ15464 509 aa7.55□□□□□ -1.2
TPM4-210ENST00000588507 ISXQ2M1V0 245 aa7.55□□□□□ -1.2
TPM4-210ENST00000588507 CENPPQ6IPU0 288 aa7.55□□□□□ -1.2
TPM4-210ENST00000588507 FOXR1Q6PIV2 292 aa7.55□□□□□ -1.2
TPM4-210ENST00000588507 C14orf80Q86SX3 495 aa7.55□□□□□ -1.2
TPM4-210ENST00000588507 CDR2LQ86X02 465 aaPredicted RBP7.55□□□□□ -1.2
TPM4-210ENST00000588507 TTC13Q8NBP0 860 aa7.55□□□□□ -1.2
TPM4-210ENST00000588507 APPL2Q8NEU8 664 aa7.55□□□□□ -1.2
TPM4-210ENST00000588507 MRPS31Q92665 395 aaKnown RBP7.55□□□□□ -1.2
TPM4-210ENST00000588507 GRAMD1AQ96CP6 724 aa7.55□□□□□ -1.2
TPM4-210ENST00000588507 UBAC1Q9BSL1 405 aa7.55□□□□□ -1.2
TPM4-210ENST00000588507 CXCL16Q9H2A7 254 aa7.55□□□□□ -1.2
TPM4-210ENST00000588507 DISC1Q9NRI5 854 aa7.55□□□□□ -1.2
TPM4-210ENST00000588507 ZSWIM5Q9P217 1185 aa7.55□□□□□ -1.2
TPM4-210ENST00000588507 HEATR9A2RTY3 570 aa7.54□□□□□ -1.2
TPM4-210ENST00000588507 TMEM150BA6NC51 233 aa7.54□□□□□ -1.2
TPM4-210ENST00000588507 KCNJ18B7U540 433 aa7.54□□□□□ -1.2
TPM4-210ENST00000588507 SOAT2O75908 522 aa7.54□□□□□ -1.2
TPM4-210ENST00000588507 CD99P14209 185 aa7.54□□□□□ -1.2
TPM4-210ENST00000588507 ATP2B1P20020 1258 aa7.54□□□□□ -1.2
TPM4-210ENST00000588507 EPHA8P29322 1005 aaPredicted RBP7.54□□□□□ -1.2
TPM4-210ENST00000588507 FXR2P51116 673 aaKnown RBP eCLIP7.54□□□□□ -1.22e-7■□□□□ 10.7
TPM4-210ENST00000588507 RPL10AP62906 217 aaKnown RBP7.54□□□□□ -1.2
TPM4-210ENST00000588507 DAB2P98082 770 aa7.54□□□□□ -1.2
TPM4-210ENST00000588507 EIF2S3LQ2VIR3 472 aaKnown RBP7.54□□□□□ -1.2
TPM4-210ENST00000588507 JAKMIP3Q5VZ66 844 aa7.54□□□□□ -1.2
TPM4-210ENST00000588507 SP5Q6BEB4 398 aaPredicted RBP7.54□□□□□ -1.2
TPM4-210ENST00000588507 NUDT18Q6ZVK8 323 aa7.54□□□□□ -1.2
TPM4-210ENST00000588507 TMEM150AQ86TG1 271 aa7.54□□□□□ -1.2
TPM4-210ENST00000588507 RDH13Q8NBN7 331 aa7.54□□□□□ -1.2
TPM4-210ENST00000588507 FRAT1Q92837 279 aaPredicted RBP7.54□□□□□ -1.2
TPM4-210ENST00000588507 NUP58Q9BVL2 599 aa7.54□□□□□ -1.2
TPM4-210ENST00000588507 ACE2Q9BYF1 805 aaPredicted RBP7.54□□□□□ -1.2
TPM4-210ENST00000588507 LATS2Q9NRM7 1088 aa7.54□□□□□ -1.2
TPM4-210ENST00000588507 SEPT10Q9P0V9 454 aa7.54□□□□□ -1.2
TPM4-210ENST00000588507 SEC63Q9UGP8 760 aaKnown RBP7.54□□□□□ -1.2
TPM4-210ENST00000588507 ERRFI1Q9UJM3 462 aaPredicted RBP7.54□□□□□ -1.2
TPM4-210ENST00000588507 MN1Q10571 1320 aaPredicted RBP7.53□□□□□ -1.2
TPM4-210ENST00000588507 A0A1B0GUA9 196 aa7.53□□□□□ -1.2
TPM4-210ENST00000588507 FAM86B1E9PN63 330 aa7.53□□□□□ -1.2
TPM4-210ENST00000588507 VILLO15195 856 aa7.53□□□□□ -1.2
TPM4-210ENST00000588507 TRAK2O60296 914 aa7.53□□□□□ -1.2
TPM4-210ENST00000588507 LZTS3O60299 673 aaPredicted RBP7.53□□□□□ -1.2
TPM4-210ENST00000588507 STBD1O95210 358 aa7.53□□□□□ -1.2
TPM4-210ENST00000588507 FOSP01100 380 aaPredicted RBP7.53□□□□□ -1.2
TPM4-210ENST00000588507 F11P03951 625 aa7.53□□□□□ -1.2
TPM4-210ENST00000588507 CYP17A1P05093 508 aa7.53□□□□□ -1.2
TPM4-210ENST00000588507 FAM86B2P0C5J1 330 aa7.53□□□□□ -1.2
TPM4-210ENST00000588507 OR4Q2P0C623 313 aa7.53□□□□□ -1.2
TPM4-210ENST00000588507 USP17L7P0C7H9 530 aa7.53□□□□□ -1.2
TPM4-210ENST00000588507 MARCKSP29966 332 aaPredicted RBP7.53□□□□□ -1.2
TPM4-210ENST00000588507 NMT1P30419 496 aaKnown RBP7.53□□□□□ -1.2
TPM4-210ENST00000588507 ARRB1P49407 418 aaPredicted RBP7.53□□□□□ -1.2
TPM4-210ENST00000588507 TPMTP51580 245 aa7.53□□□□□ -1.2
TPM4-210ENST00000588507 NLRP12P59046 1061 aa7.53□□□□□ -1.2
TPM4-210ENST00000588507 PTENP60484 403 aa7.53□□□□□ -1.2
TPM4-210ENST00000588507 GPR17Q13304 367 aa7.53□□□□□ -1.2
TPM4-210ENST00000588507 AMHR2Q16671 573 aa7.53□□□□□ -1.2
TPM4-210ENST00000588507 SFMBT2Q5VUG0 894 aa7.53□□□□□ -1.2
TPM4-210ENST00000588507 EGFLAMQ63HQ2 1017 aa7.53□□□□□ -1.2
TPM4-210ENST00000588507 MIB1Q86YT6 1006 aa7.53□□□□□ -1.2
TPM4-210ENST00000588507 EXOC8Q8IYI6 725 aa7.53□□□□□ -1.2
TPM4-210ENST00000588507 CHPFQ8IZ52 775 aa7.53□□□□□ -1.2
TPM4-210ENST00000588507 TEX19Q8NA77 164 aa7.53□□□□□ -1.2
TPM4-210ENST00000588507 ATAD1Q8NBU5 361 aa7.53□□□□□ -1.2
TPM4-210ENST00000588507 WDR36Q8NI36 951 aaKnown RBP7.53□□□□□ -1.2
TPM4-210ENST00000588507 SH3RF2Q8TEC5 729 aa7.53□□□□□ -1.2
TPM4-210ENST00000588507 DDX12PQ92771 950 aa7.53□□□□□ -1.2
TPM4-210ENST00000588507 TMEM143Q96AN5 459 aa7.53□□□□□ -1.2
TPM4-210ENST00000588507 SKA1Q96BD8 255 aa7.53□□□□□ -1.2
TPM4-210ENST00000588507 TCTN2Q96GX1 697 aa7.53□□□□□ -1.2
TPM4-210ENST00000588507 ATXN7L3BQ96GX2 97 aa7.53□□□□□ -1.2
TPM4-210ENST00000588507 PGBD1Q96JS3 809 aa7.53□□□□□ -1.2
TPM4-210ENST00000588507 OXCT2Q9BYC2 517 aaPredicted RBP7.53□□□□□ -1.2
TPM4-210ENST00000588507 ABCG4Q9H172 646 aa7.53□□□□□ -1.2
TPM4-210ENST00000588507 TMEM206Q9H813 350 aa7.53□□□□□ -1.2
TPM4-210ENST00000588507 GOLGA2P5Q9HBQ8 144 aa7.53□□□□□ -1.2
TPM4-210ENST00000588507 NUB1Q9Y5A7 615 aa7.53□□□□□ -1.2
TPM4-210ENST00000588507 IGLV3-22A0A075B6J6 115 aa7.52□□□□□ -1.21
TPM4-210ENST00000588507 MTMR11A4FU01 709 aa7.52□□□□□ -1.21
TPM4-210ENST00000588507 PRR19A6NJB7 356 aa7.52□□□□□ -1.21
TPM4-210ENST00000588507 TMEM200CA6NKL6 621 aa7.52□□□□□ -1.21
TPM4-210ENST00000588507 PODXLO00592 558 aa7.52□□□□□ -1.21
TPM4-210ENST00000588507 B4GALT5O43286 388 aa7.52□□□□□ -1.21
TPM4-210ENST00000588507 ITGA2BP08514 1039 aa7.52□□□□□ -1.21
TPM4-210ENST00000588507 LIPCP11150 499 aa7.52□□□□□ -1.21
TPM4-210ENST00000588507 CD1EP15812 388 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms