RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 SEC13P55735 322 aa14.77□□□□□ -0.05
CLPTM1-208ENST00000588274 SLC7A9P82251 487 aa14.77□□□□□ -0.05
CLPTM1-208ENST00000588274 KCNB1Q14721 858 aa14.77□□□□□ -0.05
CLPTM1-208ENST00000588274 LMBRD2Q68DH5 695 aaPredicted RBP14.77□□□□□ -0.05
CLPTM1-208ENST00000588274 ANO7Q6IWH7 933 aa14.77□□□□□ -0.05
CLPTM1-208ENST00000588274 BRAPQ7Z569 592 aa14.77□□□□□ -0.05
CLPTM1-208ENST00000588274 SPATA2LQ8IUW3 424 aaPredicted RBP14.77□□□□□ -0.05
CLPTM1-208ENST00000588274 CSGALNACT2Q8N6G5 542 aa14.77□□□□□ -0.05
CLPTM1-208ENST00000588274 GLIS3Q8NEA6 775 aa14.77□□□□□ -0.05
CLPTM1-208ENST00000588274 ACCSQ96QU6 501 aa14.77□□□□□ -0.05
CLPTM1-208ENST00000588274 FNBP1Q96RU3 617 aa14.77□□□□□ -0.05
CLPTM1-208ENST00000588274 SYT15Q9BQS2 421 aa14.77□□□□□ -0.05
CLPTM1-208ENST00000588274 RNF38Q9H0F5 515 aa14.77□□□□□ -0.05
CLPTM1-208ENST00000588274 MRPL44Q9H9J2 332 aaKnown RBP14.77□□□□□ -0.05
CLPTM1-208ENST00000588274 ZMIZ1Q9ULJ6 1067 aa14.77□□□□□ -0.05
CLPTM1-208ENST00000588274 CLIC4Q9Y696 253 aa14.77□□□□□ -0.05
CLPTM1-208ENST00000588274 ATRXP46100 2492 aa14.77□□□□□ -0.05
CLPTM1-208ENST00000588274 CACNA1GO43497 2377 aa14.77□□□□□ -0.05
CLPTM1-208ENST00000588274 DSPP15924 2871 aaKnown RBP14.77□□□□□ -0.05
CLPTM1-208ENST00000588274 THADAQ6YHU6 1953 aa14.76□□□□□ -0.05
CLPTM1-208ENST00000588274 PCDH15Q96QU1 1955 aa14.76□□□□□ -0.05
CLPTM1-208ENST00000588274 ZNF840PA6NDX5 716 aa14.76□□□□□ -0.05
CLPTM1-208ENST00000588274 NFATC1O95644 943 aa14.76□□□□□ -0.05
CLPTM1-208ENST00000588274 NEFLP07196 543 aa14.76□□□□□ -0.05
CLPTM1-208ENST00000588274 GAP43P17677 238 aa14.76□□□□□ -0.05
CLPTM1-208ENST00000588274 PFKLP17858 780 aa14.76□□□□□ -0.05
CLPTM1-208ENST00000588274 HDCP19113 662 aa14.76□□□□□ -0.05
CLPTM1-208ENST00000588274 PCSK1P29120 753 aa14.76□□□□□ -0.05
CLPTM1-208ENST00000588274 GBP1P32455 592 aa14.76□□□□□ -0.05
CLPTM1-208ENST00000588274 HOXD13P35453 343 aa14.76□□□□□ -0.05
CLPTM1-208ENST00000588274 P2RY2P41231 377 aa14.76□□□□□ -0.05
CLPTM1-208ENST00000588274 KIR2DL1P43626 348 aaPredicted RBP14.76□□□□□ -0.05
CLPTM1-208ENST00000588274 LHX1P48742 406 aa14.76□□□□□ -0.05
CLPTM1-208ENST00000588274 IRX4P78413 519 aa14.76□□□□□ -0.05
CLPTM1-208ENST00000588274 C2orf27AQ580R0 203 aa14.76□□□□□ -0.05
CLPTM1-208ENST00000588274 PEAR1Q5VY43 1037 aaPredicted RBP14.76□□□□□ -0.05
CLPTM1-208ENST00000588274 ERICH6BQ5W0A0 696 aa14.76□□□□□ -0.05
CLPTM1-208ENST00000588274 VSTM1Q6UX27 236 aa14.76□□□□□ -0.05
CLPTM1-208ENST00000588274 SCN4BQ8IWT1 228 aa14.76□□□□□ -0.05
CLPTM1-208ENST00000588274 FRMD1Q8N878 549 aa14.76□□□□□ -0.05
CLPTM1-208ENST00000588274 KIAA1958Q8N8K9 716 aa14.76□□□□□ -0.05
CLPTM1-208ENST00000588274 IL17RCQ8NAC3 791 aa14.76□□□□□ -0.05
CLPTM1-208ENST00000588274 TTC16Q8NEE8 873 aa14.76□□□□□ -0.05
CLPTM1-208ENST00000588274 RASSF8Q8NHQ8 419 aa14.76□□□□□ -0.05
CLPTM1-208ENST00000588274 PCED1BQ96HM7 432 aa14.76□□□□□ -0.05
CLPTM1-208ENST00000588274 ZFRQ96KR1 1074 aaKnown RBP14.76□□□□□ -0.05
CLPTM1-208ENST00000588274 CEP295NLQ96MC4 621 aa14.76□□□□□ -0.05
CLPTM1-208ENST00000588274 INTS13Q9NVM9 706 aa14.76□□□□□ -0.05
CLPTM1-208ENST00000588274 EVLQ9UI08 416 aaPredicted RBP14.76□□□□□ -0.05
CLPTM1-208ENST00000588274 MBD1Q9UIS9 605 aaPredicted RBP14.76□□□□□ -0.05
CLPTM1-208ENST00000588274 NBEAQ8NFP9 2946 aa14.76□□□□□ -0.05
CLPTM1-208ENST00000588274 ASCC3Q8N3C0 2202 aaKnown RBP14.76□□□□□ -0.05
CLPTM1-208ENST00000588274 CACNA1EQ15878 2313 aa14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 SGK1O00141 431 aa14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 SCAMP3O14828 347 aaKnown RBP14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 ADAM23O75077 832 aa14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 GCNT3O95395 438 aa14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 CEACAM1P13688 526 aa14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 HOXB3P14651 431 aaPredicted RBP14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 WARSP23381 471 aaKnown RBP14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 BDNFP23560 247 aa14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 PTGER3P43115 390 aa14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 SLC6A11P48066 632 aa14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 NOP14P78316 857 aaKnown RBP14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 RBP5P82980 135 aa14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 FOXC1Q12948 553 aa14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 PSMD2Q13200 908 aa14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 USP39Q53GS9 565 aaKnown RBP14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 DPH6Q7L8W6 267 aa14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 CYP2U1Q7Z449 544 aa14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 FILIP1Q7Z7B0 1213 aa14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 C11orf74Q86VG3 221 aa14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 CBWD2Q8IUF1 395 aa14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 ADGRG2Q8IZP9 1017 aa14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 CCDC33Q8N5R6 958 aa14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 ALLCQ8N6M5 410 aa14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 RLN3Q8WXF3 142 aa14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 EXOC4Q96A65 974 aa14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 CLIC6Q96NY7 704 aa14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 ADAM33Q9BZ11 813 aa14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 GZF1Q9H116 711 aaPredicted RBP14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 PCIF1Q9H4Z3 704 aa14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 TMEM9BQ9NQ34 198 aa14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 TMEM74BQ9NUR3 256 aa14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 HCN2Q9UL51 889 aa14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 CDH9Q9ULB4 789 aa14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 EXOC7Q9UPT5 735 aa14.75□□□□□ -0.05
CLPTM1-208ENST00000588274 A0A0A0MRY4 1105 aa14.74□□□□□ -0.05
CLPTM1-208ENST00000588274 KHNYNO15037 678 aaKnown RBP14.74□□□□□ -0.05
CLPTM1-208ENST00000588274 LDHAP00338 332 aaKnown RBP14.74□□□□□ -0.05
CLPTM1-208ENST00000588274 KRT19P08727 400 aa14.74□□□□□ -0.05
CLPTM1-208ENST00000588274 EIF2DP41214 584 aaKnown RBP14.74□□□□□ -0.05
CLPTM1-208ENST00000588274 DHCR24Q15392 516 aa14.74□□□□□ -0.05
CLPTM1-208ENST00000588274 MAP7D1Q3KQU3 841 aa14.74□□□□□ -0.05
CLPTM1-208ENST00000588274 DAB2IPQ5VWQ8 1189 aa14.74□□□□□ -0.05
CLPTM1-208ENST00000588274 RHBDF2Q6PJF5 856 aa14.74□□□□□ -0.05
CLPTM1-208ENST00000588274 DENND5BQ6ZUT9 1274 aa14.74□□□□□ -0.05
CLPTM1-208ENST00000588274 ETFBKMTQ8IXQ9 262 aa14.74□□□□□ -0.05
CLPTM1-208ENST00000588274 FSIP1Q8NA03 581 aa14.74□□□□□ -0.05
CLPTM1-208ENST00000588274 CACTINQ8WUQ7 758 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms