RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 AUTS2Q8WXX7 1259 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 C18orf8Q96DM3 657 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 SMARCD1Q96GM5 515 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 PGLYRP2Q96PD5 576 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 KCNK16Q96T55 309 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 GDF15Q99988 308 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 C17orf80Q9BSJ5 609 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 TRIM7Q9C029 511 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 UBE2OQ9C0C9 1292 aaKnown RBP11.93□□□□□ -0.5
VMP1-207ENST00000588131 GOLPH3Q9H4A6 298 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 SYNCQ9H7C4 482 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 ABI2Q9NYB9 513 aaPredicted RBP11.93□□□□□ -0.5
VMP1-207ENST00000588131 BACE2Q9Y5Z0 518 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 CDY1Q9Y6F8 540 aa11.93□□□□□ -0.5
VMP1-207ENST00000588131 HHLA1C9JL84 531 aa11.92□□□□□ -0.5
VMP1-207ENST00000588131 PAPSS1O43252 624 aaPredicted RBP11.92□□□□□ -0.5
VMP1-207ENST00000588131 PALMO75781 387 aa11.92□□□□□ -0.5
VMP1-207ENST00000588131 LCP1P13796 627 aa11.92□□□□□ -0.5
VMP1-207ENST00000588131 CYP2F1P24903 491 aa11.92□□□□□ -0.5
VMP1-207ENST00000588131 DNAJB2P25686 324 aa11.92□□□□□ -0.5
VMP1-207ENST00000588131 BMPR1AP36894 532 aa11.92□□□□□ -0.5
VMP1-207ENST00000588131 HADHBP55084 474 aaKnown RBP11.92□□□□□ -0.5
VMP1-207ENST00000588131 GSCP56915 257 aaPredicted RBP11.92□□□□□ -0.5
VMP1-207ENST00000588131 ROR1Q01973 937 aa11.92□□□□□ -0.5
VMP1-207ENST00000588131 MAMLD1Q13495 774 aa11.92□□□□□ -0.5
VMP1-207ENST00000588131 PPP1R15BQ5SWA1 713 aa11.92□□□□□ -0.5
VMP1-207ENST00000588131 SLC8B1Q6J4K2 584 aa11.92□□□□□ -0.5
VMP1-207ENST00000588131 DNAJC24Q6P3W2 148 aa11.92□□□□□ -0.5
VMP1-207ENST00000588131 RNF19BQ6ZMZ0 732 aa11.92□□□□□ -0.5
VMP1-207ENST00000588131 C4orf50Q6ZRC1 276 aa11.92□□□□□ -0.5
VMP1-207ENST00000588131 GPRIN1Q7Z2K8 1008 aa11.92□□□□□ -0.5
VMP1-207ENST00000588131 TMEM110Q86TL2 294 aa11.92□□□□□ -0.5
VMP1-207ENST00000588131 MSANTD4Q8NCY6 345 aa11.92□□□□□ -0.5
VMP1-207ENST00000588131 C3orf20Q8ND61 904 aa11.92□□□□□ -0.5
VMP1-207ENST00000588131 FBXO22Q8NEZ5 403 aa11.92□□□□□ -0.5
VMP1-207ENST00000588131 CLEC4CQ8WTT0 213 aa11.92□□□□□ -0.5
VMP1-207ENST00000588131 KCTD13Q8WZ19 329 aa11.92□□□□□ -0.5
VMP1-207ENST00000588131 MCRS1Q96EZ8 462 aa11.92□□□□□ -0.5
VMP1-207ENST00000588131 PIWIL1Q96J94 861 aaKnown RBP11.92□□□□□ -0.5
VMP1-207ENST00000588131 BTBD6Q96KE9 485 aa11.92□□□□□ -0.5
VMP1-207ENST00000588131 CLSTN3Q9BQT9 956 aa11.92□□□□□ -0.5
VMP1-207ENST00000588131 OXCT2Q9BYC2 517 aaPredicted RBP11.92□□□□□ -0.5
VMP1-207ENST00000588131 MIS12Q9H081 205 aa11.92□□□□□ -0.5
VMP1-207ENST00000588131 ZBP1Q9H171 429 aa11.92□□□□□ -0.5
VMP1-207ENST00000588131 CRISPLD1Q9H336 500 aa11.92□□□□□ -0.5
VMP1-207ENST00000588131 CSNK1G1Q9HCP0 422 aa11.92□□□□□ -0.5
VMP1-207ENST00000588131 UVRAGQ9P2Y5 699 aa11.92□□□□□ -0.5
VMP1-207ENST00000588131 DNAI1Q9UI46 699 aa11.92□□□□□ -0.5
VMP1-207ENST00000588131 STRIP2Q9ULQ0 834 aa11.92□□□□□ -0.5
VMP1-207ENST00000588131 YBX2Q9Y2T7 364 aaKnown RBP11.92□□□□□ -0.5
VMP1-207ENST00000588131 PCDHB5Q9Y5E4 795 aa11.92□□□□□ -0.5
VMP1-207ENST00000588131 PCDHGC5Q9Y5F6 944 aa11.92□□□□□ -0.5
VMP1-207ENST00000588131 WDR27A2RRH5 827 aa11.91□□□□□ -0.5
VMP1-207ENST00000588131 MTMR11A4FU01 709 aa11.91□□□□□ -0.5
VMP1-207ENST00000588131 TMEM110-MUSTN1A8MSY1 372 aa11.91□□□□□ -0.5
VMP1-207ENST00000588131 BUB1BO60566 1050 aaPredicted RBP11.91□□□□□ -0.5
VMP1-207ENST00000588131 URODP06132 367 aa11.91□□□□□ -0.5
VMP1-207ENST00000588131 CA3P07451 260 aa11.91□□□□□ -0.5
VMP1-207ENST00000588131 OR1D2P34982 312 aa11.91□□□□□ -0.5
VMP1-207ENST00000588131 PBX2P40425 430 aa11.91□□□□□ -0.5
VMP1-207ENST00000588131 GPR15P49685 360 aa11.91□□□□□ -0.5
VMP1-207ENST00000588131 SLC8A3P57103 927 aa11.91□□□□□ -0.5
VMP1-207ENST00000588131 KRT17Q04695 432 aa11.91□□□□□ -0.5
VMP1-207ENST00000588131 ADIGQ0VDE8 80 aa11.91□□□□□ -0.5
VMP1-207ENST00000588131 GPR17Q13304 367 aa11.91□□□□□ -0.5
VMP1-207ENST00000588131 ZNF268Q14587 947 aaPredicted RBP11.91□□□□□ -0.5
VMP1-207ENST00000588131 NFE2Q16621 373 aaPredicted RBP11.91□□□□□ -0.5
VMP1-207ENST00000588131 CFAP221Q4G0U5 840 aa11.91□□□□□ -0.5
VMP1-207ENST00000588131 OR6B2Q6IFH4 312 aa11.91□□□□□ -0.5
VMP1-207ENST00000588131 OLFML1Q6UWY5 402 aa11.91□□□□□ -0.5
VMP1-207ENST00000588131 CPNE8Q86YQ8 564 aa11.91□□□□□ -0.5
VMP1-207ENST00000588131 TTC9BQ8N6N2 239 aa11.91□□□□□ -0.5
VMP1-207ENST00000588131 LRRC57Q8N9N7 239 aa11.91□□□□□ -0.5
VMP1-207ENST00000588131 ATAD1Q8NBU5 361 aa11.91□□□□□ -0.5
VMP1-207ENST00000588131 JOSD2Q8TAC2 188 aa11.91□□□□□ -0.5
VMP1-207ENST00000588131 FEZF2Q8TBJ5 459 aa11.91□□□□□ -0.5
VMP1-207ENST00000588131 ZNF592Q92610 1267 aa11.91□□□□□ -0.5
VMP1-207ENST00000588131 HSFY1Q96LI6 401 aa11.91□□□□□ -0.5
VMP1-207ENST00000588131 MCEEQ96PE7 176 aa11.91□□□□□ -0.5
VMP1-207ENST00000588131 ALS2CR12Q96Q35 445 aa11.91□□□□□ -0.5
VMP1-207ENST00000588131 SELENOOQ9BVL4 669 aa11.91□□□□□ -0.5
VMP1-207ENST00000588131 ALG13Q9NP73 1137 aaKnown RBP11.91□□□□□ -0.5
VMP1-207ENST00000588131 DMAP1Q9NPF5 467 aaPredicted RBP11.91□□□□□ -0.5
VMP1-207ENST00000588131 CYLDQ9NQC7 956 aa11.91□□□□□ -0.5
VMP1-207ENST00000588131 METTL5Q9NRN9 209 aaKnown RBP11.91□□□□□ -0.5
VMP1-207ENST00000588131 PARVAQ9NVD7 372 aa11.91□□□□□ -0.5
VMP1-207ENST00000588131 WDR35Q9P2L0 1181 aa11.91□□□□□ -0.5
VMP1-207ENST00000588131 ANAPC7Q9UJX3 599 aa11.91□□□□□ -0.5
VMP1-207ENST00000588131 MTUS1Q9ULD2 1270 aa11.91□□□□□ -0.5
VMP1-207ENST00000588131 SCINQ9Y6U3 715 aa11.91□□□□□ -0.5
VMP1-207ENST00000588131 MYH10P35580 1976 aa11.9□□□□□ -0.5
VMP1-207ENST00000588131 F8VP50 259 aa11.9□□□□□ -0.5
VMP1-207ENST00000588131 KIF2AO00139 706 aaPredicted RBP11.9□□□□□ -0.5
VMP1-207ENST00000588131 NCK2O43639 380 aa11.9□□□□□ -0.5
VMP1-207ENST00000588131 LILRB3O75022 631 aa11.9□□□□□ -0.5
VMP1-207ENST00000588131 FTCDO95954 541 aa11.9□□□□□ -0.5
VMP1-207ENST00000588131 CTSAP10619 480 aa11.9□□□□□ -0.5
VMP1-207ENST00000588131 DNAJB1P25685 340 aa11.9□□□□□ -0.5
VMP1-207ENST00000588131 ACADSBP45954 432 aa11.9□□□□□ -0.5
VMP1-207ENST00000588131 NDUFV1P49821 464 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms