RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 RUNX3Q13761 415 aa16.79■□□□□ 0.28
NCLN-203ENST00000587740 ZCWPW2Q504Y3 356 aa16.79■□□□□ 0.28
NCLN-203ENST00000587740 RNF43Q68DV7 783 aa16.79■□□□□ 0.28
NCLN-203ENST00000587740 NAIF1Q69YI7 327 aaPredicted RBP16.79■□□□□ 0.28
NCLN-203ENST00000587740 KLHL10Q6JEL2 608 aa16.79■□□□□ 0.28
NCLN-203ENST00000587740 TMEM150AQ86TG1 271 aa16.79■□□□□ 0.28
NCLN-203ENST00000587740 EFCAB13Q8IY85 973 aa16.79■□□□□ 0.28
NCLN-203ENST00000587740 SENP8Q96LD8 212 aa16.79■□□□□ 0.28
NCLN-203ENST00000587740 FNBP1Q96RU3 617 aa16.79■□□□□ 0.28
NCLN-203ENST00000587740 EBF3Q9H4W6 596 aa16.79■□□□□ 0.28
NCLN-203ENST00000587740 VPS45Q9NRW7 570 aa16.79■□□□□ 0.28
NCLN-203ENST00000587740 HSFX1Q9UBD0 423 aa16.79■□□□□ 0.28
NCLN-203ENST00000587740 SLC8A2Q9UPR5 921 aa16.79■□□□□ 0.28
NCLN-203ENST00000587740 CCL26Q9Y258 94 aa16.79■□□□□ 0.28
NCLN-203ENST00000587740 TSC2P49815 1807 aa16.79■□□□□ 0.28
NCLN-203ENST00000587740 AKAP13Q12802 2813 aa16.78■□□□□ 0.28
NCLN-203ENST00000587740 PPP1R3GB7ZBB8 358 aa16.78■□□□□ 0.28
NCLN-203ENST00000587740 CETN3O15182 167 aa16.78■□□□□ 0.28
NCLN-203ENST00000587740 RNF40O75150 1001 aa16.78■□□□□ 0.28
NCLN-203ENST00000587740 AKAP3O75969 853 aa16.78■□□□□ 0.28
NCLN-203ENST00000587740 TMEM191BP0C7N4 346 aa16.78■□□□□ 0.28
NCLN-203ENST00000587740 CASP4P49662 377 aa16.78■□□□□ 0.28
NCLN-203ENST00000587740 WNT7BP56706 349 aa16.78■□□□□ 0.28
NCLN-203ENST00000587740 TFAMQ00059 246 aaKnown RBP16.78■□□□□ 0.28
NCLN-203ENST00000587740 LRRC63Q05C16 580 aa16.78■□□□□ 0.28
NCLN-203ENST00000587740 PSMD6Q15008 389 aa16.78■□□□□ 0.28
NCLN-203ENST00000587740 CCDC183Q5T5S1 534 aa16.78■□□□□ 0.28
NCLN-203ENST00000587740 ANKRD40Q6AI12 368 aa16.78■□□□□ 0.28
NCLN-203ENST00000587740 ITIH5Q86UX2 942 aa16.78■□□□□ 0.28
NCLN-203ENST00000587740 NELFBQ8WX92 580 aa16.78■□□□□ 0.28
NCLN-203ENST00000587740 ANKRD36BP1Q96IX9 119 aa16.78■□□□□ 0.28
NCLN-203ENST00000587740 HHIPQ96QV1 700 aa16.78■□□□□ 0.28
NCLN-203ENST00000587740 SEPT5Q99719 369 aaPredicted RBP16.78■□□□□ 0.28
NCLN-203ENST00000587740 THG1LQ9NWX6 298 aaKnown RBP16.78■□□□□ 0.28
NCLN-203ENST00000587740 DPP3Q9NY33 737 aa16.78■□□□□ 0.28
NCLN-203ENST00000587740 ZMIZ1Q9ULJ6 1067 aa16.78■□□□□ 0.28
NCLN-203ENST00000587740 WASF3Q9UPY6 502 aa16.78■□□□□ 0.28
NCLN-203ENST00000587740 FASNP49327 2511 aaKnown RBP16.78■□□□□ 0.28
NCLN-203ENST00000587740 NUP205Q92621 2012 aa16.77■□□□□ 0.28
NCLN-203ENST00000587740 BICDL2A1A5D9 508 aa16.77■□□□□ 0.28
NCLN-203ENST00000587740 DCLK1O15075 740 aa16.77■□□□□ 0.28
NCLN-203ENST00000587740 ATG13O75143 517 aa16.77■□□□□ 0.28
NCLN-203ENST00000587740 TNNC2P02585 160 aa16.77■□□□□ 0.28
NCLN-203ENST00000587740 DLATP10515 647 aaKnown RBP16.77■□□□□ 0.28
NCLN-203ENST00000587740 HOXB3P14651 431 aaPredicted RBP16.77■□□□□ 0.28
NCLN-203ENST00000587740 TNNI1P19237 187 aa16.77■□□□□ 0.28
NCLN-203ENST00000587740 CDC25CP30307 473 aa16.77■□□□□ 0.28
NCLN-203ENST00000587740 PSMC2P35998 433 aaKnown RBP16.77■□□□□ 0.28
NCLN-203ENST00000587740 GRSF1Q12849 480 aaKnown RBP eCLIP16.77■□□□□ 0.28
NCLN-203ENST00000587740 PAK1Q13153 545 aa16.77■□□□□ 0.28
NCLN-203ENST00000587740 MGAT5BQ3V5L5 792 aa16.77■□□□□ 0.28
NCLN-203ENST00000587740 SLC39A12Q504Y0 691 aa16.77■□□□□ 0.28
NCLN-203ENST00000587740 WDR49Q8IV35 697 aa16.77■□□□□ 0.28
NCLN-203ENST00000587740 CMTM8Q8IZV2 173 aa16.77■□□□□ 0.28
NCLN-203ENST00000587740 CAMKK1Q8N5S9 505 aa16.77■□□□□ 0.28
NCLN-203ENST00000587740 GIPC2Q8TF65 315 aa16.77■□□□□ 0.28
NCLN-203ENST00000587740 EZH1Q92800 747 aaPredicted RBP16.77■□□□□ 0.28
NCLN-203ENST00000587740 USP13Q92995 863 aaPredicted RBP16.77■□□□□ 0.28
NCLN-203ENST00000587740 CCDC127Q96BQ5 260 aa16.77■□□□□ 0.28
NCLN-203ENST00000587740 TMEM121BQ9BXQ6 578 aaPredicted RBP16.77■□□□□ 0.28
NCLN-203ENST00000587740 ZCWPW1Q9H0M4 648 aa16.77■□□□□ 0.28
NCLN-203ENST00000587740 CTNND2Q9UQB3 1225 aa16.77■□□□□ 0.28
NCLN-203ENST00000587740 TRIM49BA6NDI0 452 aa16.76■□□□□ 0.27
NCLN-203ENST00000587740 MAPK13O15264 365 aa16.76■□□□□ 0.27
NCLN-203ENST00000587740 ARSAP15289 507 aa16.76■□□□□ 0.27
NCLN-203ENST00000587740 TUFMP49411 452 aaKnown RBP16.76■□□□□ 0.27
NCLN-203ENST00000587740 GALK1P51570 392 aa16.76■□□□□ 0.27
NCLN-203ENST00000587740 PMS1P54277 932 aaKnown RBP16.76■□□□□ 0.27
NCLN-203ENST00000587740 NLRP12P59046 1061 aa16.76■□□□□ 0.27
NCLN-203ENST00000587740 FKBP3Q00688 224 aaKnown RBP16.76■□□□□ 0.27
NCLN-203ENST00000587740 DUOXA2Q1HG44 320 aa16.76■□□□□ 0.27
NCLN-203ENST00000587740 C9orf57Q5W0N0 161 aa16.76■□□□□ 0.27
NCLN-203ENST00000587740 LMBRD2Q68DH5 695 aaPredicted RBP16.76■□□□□ 0.27
NCLN-203ENST00000587740 UNQ6494/PRO21346Q6UXR6 183 aa16.76■□□□□ 0.27
NCLN-203ENST00000587740 LRRTM3Q86VH5 581 aa16.76■□□□□ 0.27
NCLN-203ENST00000587740 FAM186BQ8IYM0 893 aa16.76■□□□□ 0.27
NCLN-203ENST00000587740 MLKLQ8NB16 471 aa16.76■□□□□ 0.27
NCLN-203ENST00000587740 SYAP1Q96A49 352 aaPredicted RBP16.76■□□□□ 0.27
NCLN-203ENST00000587740 CGRRF1Q99675 332 aa16.76■□□□□ 0.27
NCLN-203ENST00000587740 EDEM2Q9BV94 578 aa16.76■□□□□ 0.27
NCLN-203ENST00000587740 INTS13Q9NVM9 706 aa16.76■□□□□ 0.27
NCLN-203ENST00000587740 DACH1Q9UI36 760 aa16.76■□□□□ 0.27
NCLN-203ENST00000587740 R3HCC1Q9Y3T6 440 aaKnown RBP16.76■□□□□ 0.27
NCLN-203ENST00000587740 GON4LQ3T8J9 2241 aa16.76■□□□□ 0.27
NCLN-203ENST00000587740 ASCC3Q8N3C0 2202 aaKnown RBP16.76■□□□□ 0.27
NCLN-203ENST00000587740 OBSL1O75147 1896 aa16.76■□□□□ 0.27
NCLN-203ENST00000587740 PKD1L2Q7Z442 2459 aa16.75■□□□□ 0.27
NCLN-203ENST00000587740 BCLAF3A2AJT9 711 aaKnown RBP16.75■□□□□ 0.27
NCLN-203ENST00000587740 C4orf47A7E2U8 309 aa16.75■□□□□ 0.27
NCLN-203ENST00000587740 PIRO00625 290 aa16.75■□□□□ 0.27
NCLN-203ENST00000587740 TOP3BO95985 862 aaKnown RBP16.75■□□□□ 0.27
NCLN-203ENST00000587740 F11P03951 625 aa16.75■□□□□ 0.27
NCLN-203ENST00000587740 CYP11A1P05108 521 aa16.75■□□□□ 0.27
NCLN-203ENST00000587740 EPB41P11171 864 aaKnown RBP16.75■□□□□ 0.27
NCLN-203ENST00000587740 ODC1P11926 461 aa16.75■□□□□ 0.27
NCLN-203ENST00000587740 KRT13P13646 458 aa16.75■□□□□ 0.27
NCLN-203ENST00000587740 HMGA1P17096 107 aaKnown RBP16.75■□□□□ 0.27
NCLN-203ENST00000587740 SPINK2P20155 84 aa16.75■□□□□ 0.27
NCLN-203ENST00000587740 NOVA1P51513 510 aaKnown RBP16.75■□□□□ 0.27
NCLN-203ENST00000587740 COL9A2Q14055 689 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms