RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 ZDHHC7Q9NXF8 308 aa17.2■□□□□ 0.34
RANBP3-209ENST00000587411 FEM1BQ9UK73 627 aa17.2■□□□□ 0.34
RANBP3-209ENST00000587411 TBC1D30Q9Y2I9 924 aa17.2■□□□□ 0.34
RANBP3-209ENST00000587411 H0YCG3 227 aa17.2■□□□□ 0.34
RANBP3-209ENST00000587411 TMEM63AO94886 807 aa17.2■□□□□ 0.34
RANBP3-209ENST00000587411 SSTR3P32745 418 aaPredicted RBP17.2■□□□□ 0.34
RANBP3-209ENST00000587411 GDF10P55107 478 aa17.2■□□□□ 0.34
RANBP3-209ENST00000587411 RTP1P59025 263 aa17.2■□□□□ 0.34
RANBP3-209ENST00000587411 LRRC23Q53EV4 343 aaPredicted RBP17.2■□□□□ 0.34
RANBP3-209ENST00000587411 C1orf146Q5VVC0 180 aa17.2■□□□□ 0.34
RANBP3-209ENST00000587411 LMBRD2Q68DH5 695 aaPredicted RBP17.2■□□□□ 0.34
RANBP3-209ENST00000587411 TXNRD3NBQ6F5E7 133 aa17.2■□□□□ 0.34
RANBP3-209ENST00000587411 RFX8Q6ZV50 586 aa17.2■□□□□ 0.34
RANBP3-209ENST00000587411 BBS12Q6ZW61 710 aa17.2■□□□□ 0.34
RANBP3-209ENST00000587411 APBB2Q92870 758 aa17.2■□□□□ 0.34
RANBP3-209ENST00000587411 FAM84AQ96KN4 292 aa17.2■□□□□ 0.34
RANBP3-209ENST00000587411 HAPLN3Q96S86 360 aa17.2■□□□□ 0.34
RANBP3-209ENST00000587411 SRPK1Q96SB4 655 aaKnown RBP17.2■□□□□ 0.34
RANBP3-209ENST00000587411 DDX50Q9BQ39 737 aaKnown RBP17.2■□□□□ 0.34
RANBP3-209ENST00000587411 APOBEC3GQ9HC16 384 aaKnown RBP17.2■□□□□ 0.34
RANBP3-209ENST00000587411 COL20A1Q9P218 1284 aa17.2■□□□□ 0.34
RANBP3-209ENST00000587411 SLC7A8Q9UHI5 535 aa17.2■□□□□ 0.34
RANBP3-209ENST00000587411 TCRBV9S1A1TA0A576 114 aa17.19■□□□□ 0.34
RANBP3-209ENST00000587411 VNN1O95497 513 aa17.19■□□□□ 0.34
RANBP3-209ENST00000587411 KRT76Q01546 638 aa17.19■□□□□ 0.34
RANBP3-209ENST00000587411 MARK2Q7KZI7 788 aaKnown RBP17.19■□□□□ 0.34
RANBP3-209ENST00000587411 STKLD1Q8NE28 680 aa17.19■□□□□ 0.34
RANBP3-209ENST00000587411 THTPAQ9BU02 230 aa17.19■□□□□ 0.34
RANBP3-209ENST00000587411 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.19■□□□□ 0.347e-6■□□□□ 9.9
RANBP3-209ENST00000587411 CHMP2BQ9UQN3 213 aa17.19■□□□□ 0.34
RANBP3-209ENST00000587411 C3orf70A6NLC5 250 aaPredicted RBP17.19■□□□□ 0.34
RANBP3-209ENST00000587411 OGDHQ02218 1023 aa17.19■□□□□ 0.34
RANBP3-209ENST00000587411 TTC39BQ5VTQ0 682 aaPredicted RBP17.19■□□□□ 0.34
RANBP3-209ENST00000587411 MCF2L2Q86YR7 1114 aa17.19■□□□□ 0.34
RANBP3-209ENST00000587411 FAM81AQ8TBF8 368 aa17.19■□□□□ 0.34
RANBP3-209ENST00000587411 RAB3IL1Q8TBN0 382 aa17.19■□□□□ 0.34
RANBP3-209ENST00000587411 ZNF606Q8WXB4 792 aa17.19■□□□□ 0.34
RANBP3-209ENST00000587411 ACSF2Q96CM8 615 aaPredicted RBP17.19■□□□□ 0.34
RANBP3-209ENST00000587411 OPTNQ96CV9 577 aa17.19■□□□□ 0.34
RANBP3-209ENST00000587411 TTC1Q99614 292 aa17.19■□□□□ 0.34
RANBP3-209ENST00000587411 MIS12Q9H081 205 aa17.19■□□□□ 0.34
RANBP3-209ENST00000587411 NRXN2Q9P2S2 1712 aa17.19■□□□□ 0.34
RANBP3-209ENST00000587411 E5RJQ4 531 aa17.18■□□□□ 0.34
RANBP3-209ENST00000587411 POLRMTO00411 1230 aaKnown RBP17.18■□□□□ 0.34
RANBP3-209ENST00000587411 BAG2O95816 211 aa17.18■□□□□ 0.34
RANBP3-209ENST00000587411 PIM1P11309 404 aaPredicted RBP17.18■□□□□ 0.34
RANBP3-209ENST00000587411 STIP1P31948 543 aaKnown RBP17.18■□□□□ 0.34
RANBP3-209ENST00000587411 MRPS9P82933 396 aaKnown RBP17.18■□□□□ 0.34
RANBP3-209ENST00000587411 KBTBD12Q3ZCT8 623 aa17.18■□□□□ 0.34
RANBP3-209ENST00000587411 ANO5Q75V66 913 aa17.18■□□□□ 0.34
RANBP3-209ENST00000587411 TRMT1LQ7Z2T5 733 aaKnown RBP17.18■□□□□ 0.34
RANBP3-209ENST00000587411 NME8Q8N427 588 aa17.18■□□□□ 0.34
RANBP3-209ENST00000587411 RDM1Q8NG50 284 aa17.18■□□□□ 0.34
RANBP3-209ENST00000587411 NDNQ99608 321 aa17.18■□□□□ 0.34
RANBP3-209ENST00000587411 STK32BQ9NY57 414 aa17.18■□□□□ 0.34
RANBP3-209ENST00000587411 CCPG1Q9ULG6 757 aa17.18■□□□□ 0.34
RANBP3-209ENST00000587411 SORCS3Q9UPU3 1222 aa17.18■□□□□ 0.34
RANBP3-209ENST00000587411 A0A1B0GVG6 124 aa17.18■□□□□ 0.34
RANBP3-209ENST00000587411 TCRBV7S3A2A0A539 114 aa17.18■□□□□ 0.34
RANBP3-209ENST00000587411 ICAM1P05362 532 aa17.18■□□□□ 0.34
RANBP3-209ENST00000587411 KRT7P08729 469 aa17.18■□□□□ 0.34
RANBP3-209ENST00000587411 ELK3P41970 407 aa17.18■□□□□ 0.34
RANBP3-209ENST00000587411 ZNF132P52740 706 aa17.18■□□□□ 0.34
RANBP3-209ENST00000587411 XIAPP98170 497 aa17.18■□□□□ 0.34
RANBP3-209ENST00000587411 VPS72Q15906 364 aa17.18■□□□□ 0.34
RANBP3-209ENST00000587411 DACT2Q5SW24 774 aa17.18■□□□□ 0.34
RANBP3-209ENST00000587411 WDR78Q5VTH9 848 aa17.18■□□□□ 0.34
RANBP3-209ENST00000587411 PRPF39Q86UA1 669 aaKnown RBP17.18■□□□□ 0.34
RANBP3-209ENST00000587411 SLC26A11Q86WA9 606 aa17.18■□□□□ 0.34
RANBP3-209ENST00000587411 THNSL1Q8IYQ7 743 aa17.18■□□□□ 0.34
RANBP3-209ENST00000587411 FBXO27Q8NI29 283 aa17.18■□□□□ 0.34
RANBP3-209ENST00000587411 E2F7Q96AV8 911 aa17.18■□□□□ 0.34
RANBP3-209ENST00000587411 FAM210AQ96ND0 272 aa17.18■□□□□ 0.34
RANBP3-209ENST00000587411 DBNDD1Q9H9R9 158 aa17.18■□□□□ 0.34
RANBP3-209ENST00000587411 PNPLA8Q9NP80 782 aa17.18■□□□□ 0.34
RANBP3-209ENST00000587411 SLX4Q8IY92 1834 aa17.18■□□□□ 0.34
RANBP3-209ENST00000587411 BUD23O43709 281 aaKnown RBP17.17■□□□□ 0.34
RANBP3-209ENST00000587411 CREB3O43889 395 aa17.17■□□□□ 0.34
RANBP3-209ENST00000587411 CST8O60676 142 aa17.17■□□□□ 0.34
RANBP3-209ENST00000587411 KRT37O76014 449 aa17.17■□□□□ 0.34
RANBP3-209ENST00000587411 LIG4P49917 911 aa17.17■□□□□ 0.34
RANBP3-209ENST00000587411 DYNLT1P63172 113 aa17.17■□□□□ 0.34
RANBP3-209ENST00000587411 TMPRSS15P98073 1019 aa17.17■□□□□ 0.34
RANBP3-209ENST00000587411 GHRHRQ02643 423 aa17.17■□□□□ 0.34
RANBP3-209ENST00000587411 KDSRQ06136 332 aa17.17■□□□□ 0.34
RANBP3-209ENST00000587411 BST1Q10588 318 aa17.17■□□□□ 0.34
RANBP3-209ENST00000587411 TMEM35BQ8NCS4 154 aa17.17■□□□□ 0.34
RANBP3-209ENST00000587411 CCDC106Q9BWC9 280 aa17.17■□□□□ 0.34
RANBP3-209ENST00000587411 ZNF518BQ9C0D4 1074 aa17.17■□□□□ 0.34
RANBP3-209ENST00000587411 MKS1Q9NXB0 559 aa17.17■□□□□ 0.34
RANBP3-209ENST00000587411 PPM1HQ9ULR3 514 aa17.17■□□□□ 0.34
RANBP3-209ENST00000587411 PLLPQ9Y342 182 aa17.17■□□□□ 0.34
RANBP3-209ENST00000587411 PABPC4LP0CB38 370 aaKnown RBP17.17■□□□□ 0.34
RANBP3-209ENST00000587411 LSAMPQ13449 338 aa17.17■□□□□ 0.34
RANBP3-209ENST00000587411 TAZQ16635 292 aa17.17■□□□□ 0.34
RANBP3-209ENST00000587411 HSF5Q4G112 596 aaPredicted RBP17.17■□□□□ 0.34
RANBP3-209ENST00000587411 LGSNQ5TDP6 509 aa17.17■□□□□ 0.34
RANBP3-209ENST00000587411 CRLF3Q8IUI8 442 aa17.17■□□□□ 0.34
RANBP3-209ENST00000587411 ARID3BQ8IVW6 561 aaPredicted RBP17.17■□□□□ 0.34
RANBP3-209ENST00000587411 MCPH1Q8NEM0 835 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms