RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 USP24Q9UPU5 2620 aa8.39□□□□□ -1.07
VMP1-204ENST00000587259 PRR5-ARHGAP8B1AHC4 643 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 K7ESF4 209 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 ZNF263O14978 683 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 KIAA0391O15091 583 aaKnown RBP8.38□□□□□ -1.07
VMP1-204ENST00000587259 TRAPPC3O43617 180 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 ADRB1P08588 477 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 CXCL8P10145 99 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 CASP14P31944 242 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 KRT9P35527 623 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 CYLC1P35663 651 aaPredicted RBP8.38□□□□□ -1.07
VMP1-204ENST00000587259 PSMC2P35998 433 aaKnown RBP8.38□□□□□ -1.07
VMP1-204ENST00000587259 MAGEA9P43362 315 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 CXCL12P48061 93 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 YARSP54577 528 aaKnown RBP8.38□□□□□ -1.07
VMP1-204ENST00000587259 NCKAP1LP55160 1127 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 ARHGAP8P85298 464 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 CDK17Q00537 523 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 CETN1Q12798 172 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 MAPK7Q13164 816 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 PON2Q15165 354 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 SYCP1Q15431 976 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 SLC10A6Q3KNW5 377 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 XKR4Q5GH76 650 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 MIIPQ5JXC2 388 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 CYP4A22Q5TCH4 519 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 NAIF1Q69YI7 327 aaPredicted RBP8.38□□□□□ -1.07
VMP1-204ENST00000587259 LAIR1Q6GTX8 287 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 THSD4Q6ZMP0 1018 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 PRR23CQ6ZRP0 262 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 TMC8Q8IU68 726 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 CCDC170Q8IYT3 715 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 STKLD1Q8NE28 680 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 NEK11Q8NG66 645 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 IRF7Q92985 503 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 ZNF512Q96ME7 567 aaPredicted RBP8.38□□□□□ -1.07
VMP1-204ENST00000587259 DNAJC7Q99615 494 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 EPAS1Q99814 870 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 TCHPQ9BT92 498 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 LRRC3Q9BY71 257 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 HAPLN2Q9GZV7 340 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 LUC7LQ9NQ29 371 aaKnown RBP8.38□□□□□ -1.07
VMP1-204ENST00000587259 AVENQ9NQS1 362 aaPredicted RBP8.38□□□□□ -1.07
VMP1-204ENST00000587259 ASAH2Q9NR71 780 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 RAB23Q9ULC3 237 aa8.38□□□□□ -1.07
VMP1-204ENST00000587259 CACNA1GO43497 2377 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 CITO14578 2027 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 MAN2B1O00754 1011 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 ZNF197O14709 1029 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 SLC30A4O14863 429 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 AXIN1O15169 862 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 EXTL3O43909 919 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 PRPF6O94906 941 aaKnown RBP8.37□□□□□ -1.07
VMP1-204ENST00000587259 PRAMEF12O95522 483 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 AFPP02771 609 aaKnown RBP8.37□□□□□ -1.07
VMP1-204ENST00000587259 RETP07949 1114 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 KRT13P13646 458 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 PROZP22891 400 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 TNFSF9P41273 254 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 CCR3P51677 355 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 CASP5P51878 434 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 KPNA1P52294 538 aaPredicted RBP8.37□□□□□ -1.07
VMP1-204ENST00000587259 EFNA5P52803 228 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 CYP4F8P98187 520 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 GTF2BQ00403 316 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 DUSP4Q13115 394 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 IQCEQ6IPM2 695 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 ZNF280DQ6N043 979 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 MPZL3Q6UWV2 235 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 INTS8Q75QN2 995 aaKnown RBP8.37□□□□□ -1.07
VMP1-204ENST00000587259 CACNA2D4Q7Z3S7 1137 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 TMEM139Q8IV31 216 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 ARID3BQ8IVW6 561 aaPredicted RBP8.37□□□□□ -1.07
VMP1-204ENST00000587259 MFSD6LQ8IWD5 586 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 ELMOD1Q8N336 334 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 FAM160A2Q8N612 972 aaPredicted RBP8.37□□□□□ -1.07
VMP1-204ENST00000587259 GPR161Q8N6U8 529 aaKnown RBP8.37□□□□□ -1.07
VMP1-204ENST00000587259 CELF5Q8N6W0 485 aaKnown RBP8.37□□□□□ -1.07
VMP1-204ENST00000587259 ATAD1Q8NBU5 361 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 EHBP1Q8NDI1 1231 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 KIF18AQ8NI77 898 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 SYN2Q92777 582 aaPredicted RBP8.37□□□□□ -1.07
VMP1-204ENST00000587259 SUSD3Q96L08 255 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 ACAP3Q96P50 834 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 LPIN3Q9BQK8 851 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 NTPCRQ9BSD7 190 aaKnown RBP8.37□□□□□ -1.07
VMP1-204ENST00000587259 STRA6Q9BX79 667 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 MRPL4Q9BYD3 311 aaKnown RBP8.37□□□□□ -1.07
VMP1-204ENST00000587259 KMT5AQ9NQR1 393 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 CNTN3Q9P232 1028 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 ARHGAP28Q9P2N2 729 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 AFF4Q9UHB7 1163 aaKnown RBP8.37□□□□□ -1.07
VMP1-204ENST00000587259 MYO6Q9UM54 1294 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 MYH10P35580 1976 aa8.37□□□□□ -1.07
VMP1-204ENST00000587259 ANK1P16157 1881 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 FRYQ5TBA9 3013 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 SPECC1L-ADORA2AF8WAN1 911 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 H7C4K7 107 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 SYN3O14994 580 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 P4HA2O15460 535 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms