RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 CLUL1Q15846 466 aa21.53■■□□□ 1.04
ATG4D-204ENST00000586417 WSCD1Q658N2 575 aa21.53■■□□□ 1.04
ATG4D-204ENST00000586417 MTERF4Q7Z6M4 381 aaKnown RBP21.53■■□□□ 1.04
ATG4D-204ENST00000586417 NIPA2Q8N8Q9 360 aa21.53■■□□□ 1.04
ATG4D-204ENST00000586417 JOSD2Q8TAC2 188 aa21.53■■□□□ 1.04
ATG4D-204ENST00000586417 HNRNPLLQ8WVV9 542 aaKnown RBP21.53■■□□□ 1.04
ATG4D-204ENST00000586417 SLC9A7Q96T83 725 aa21.53■■□□□ 1.04
ATG4D-204ENST00000586417 NAP1L3Q99457 506 aaPredicted RBP21.53■■□□□ 1.04
ATG4D-204ENST00000586417 ZBED2Q9BTP6 218 aa21.53■■□□□ 1.04
ATG4D-204ENST00000586417 UBE2OQ9C0C9 1292 aaKnown RBP21.53■■□□□ 1.04
ATG4D-204ENST00000586417 PRG3Q9Y2Y8 225 aaPredicted RBP21.53■■□□□ 1.04
ATG4D-204ENST00000586417 GRXCR1A8MXD5 290 aa21.52■■□□□ 1.04
ATG4D-204ENST00000586417 NT5C1B-RDH14C9J2C7 533 aa21.52■■□□□ 1.04
ATG4D-204ENST00000586417 PSTPIP1O43586 416 aa21.52■■□□□ 1.04
ATG4D-204ENST00000586417 B3GAT3O94766 335 aa21.52■■□□□ 1.04
ATG4D-204ENST00000586417 ZRANB2O95218 330 aaKnown RBP eCLIP21.52■■□□□ 1.04
ATG4D-204ENST00000586417 KRT3P12035 628 aa21.52■■□□□ 1.04
ATG4D-204ENST00000586417 CCDC130P13994 396 aa21.52■■□□□ 1.04
ATG4D-204ENST00000586417 SLC11A1P49279 550 aa21.52■■□□□ 1.04
ATG4D-204ENST00000586417 SLC7A5Q01650 507 aa21.52■■□□□ 1.04
ATG4D-204ENST00000586417 SEL1L2Q5TEA6 688 aa21.52■■□□□ 1.04
ATG4D-204ENST00000586417 PMF1Q6P1K2 205 aa21.52■■□□□ 1.04
ATG4D-204ENST00000586417 TMCO3Q6UWJ1 677 aa21.52■■□□□ 1.04
ATG4D-204ENST00000586417 KLHL7Q8IXQ5 586 aa21.52■■□□□ 1.04
ATG4D-204ENST00000586417 PHOSPHO2Q8TCD6 241 aa21.52■■□□□ 1.04
ATG4D-204ENST00000586417 IPO4Q8TEX9 1081 aaKnown RBP21.52■■□□□ 1.04
ATG4D-204ENST00000586417 SLC35F5Q8WV83 523 aa21.52■■□□□ 1.04
ATG4D-204ENST00000586417 RUBCNQ92622 972 aa21.52■■□□□ 1.04
ATG4D-204ENST00000586417 SLC4A5Q9BY07 1137 aa21.52■■□□□ 1.04
ATG4D-204ENST00000586417 MRPL42Q9Y6G3 142 aaKnown RBP21.52■■□□□ 1.04
ATG4D-204ENST00000586417 KIAA1671Q9BY89 1806 aa21.51■■□□□ 1.03
ATG4D-204ENST00000586417 E5RJQ4 531 aa21.51■■□□□ 1.03
ATG4D-204ENST00000586417 I3L4J1 428 aa21.51■■□□□ 1.03
ATG4D-204ENST00000586417 ZMYND10O75800 440 aa21.51■■□□□ 1.03
ATG4D-204ENST00000586417 SEC31AO94979 1220 aaKnown RBP21.51■■□□□ 1.03
ATG4D-204ENST00000586417 RABGGTBP53611 331 aa21.51■■□□□ 1.03
ATG4D-204ENST00000586417 RHOT1Q8IXI2 618 aa21.51■■□□□ 1.03
ATG4D-204ENST00000586417 CMTR2Q8IYT2 770 aaKnown RBP21.51■■□□□ 1.03
ATG4D-204ENST00000586417 ZDHHC14Q8IZN3 488 aa21.51■■□□□ 1.03
ATG4D-204ENST00000586417 FNIP1Q8TF40 1166 aa21.51■■□□□ 1.03
ATG4D-204ENST00000586417 TNIP3Q96KP6 325 aa21.51■■□□□ 1.03
ATG4D-204ENST00000586417 UROC1Q96N76 676 aa21.51■■□□□ 1.03
ATG4D-204ENST00000586417 MTIF3Q9H2K0 278 aaKnown RBP21.51■■□□□ 1.03
ATG4D-204ENST00000586417 ST7Q9NRC1 585 aa21.51■■□□□ 1.03
ATG4D-204ENST00000586417 METTL5Q9NRN9 209 aaKnown RBP21.51■■□□□ 1.03
ATG4D-204ENST00000586417 STIM2Q9P246 746 aa21.51■■□□□ 1.03
ATG4D-204ENST00000586417 HESX1Q9UBX0 185 aa21.51■■□□□ 1.03
ATG4D-204ENST00000586417 USTQ9Y2C2 406 aa21.51■■□□□ 1.03
ATG4D-204ENST00000586417 GBF1Q92538 1859 aa21.51■■□□□ 1.03
ATG4D-204ENST00000586417 LCHNA4D1U4 455 aa21.51■■□□□ 1.03
ATG4D-204ENST00000586417 F8VP50 259 aa21.51■■□□□ 1.03
ATG4D-204ENST00000586417 NRP1O14786 923 aa21.51■■□□□ 1.03
ATG4D-204ENST00000586417 GABBR2O75899 941 aa21.51■■□□□ 1.03
ATG4D-204ENST00000586417 GALTP07902 379 aa21.51■■□□□ 1.03
ATG4D-204ENST00000586417 TCF4P15884 667 aa21.51■■□□□ 1.03
ATG4D-204ENST00000586417 PDE4CQ08493 712 aa21.51■■□□□ 1.03
ATG4D-204ENST00000586417 PIGHQ14442 188 aaPredicted RBP21.51■■□□□ 1.03
ATG4D-204ENST00000586417 TMEM173Q86WV6 379 aaPredicted RBP21.51■■□□□ 1.03
ATG4D-204ENST00000586417 ANKRD52Q8NB46 1076 aa21.51■■□□□ 1.03
ATG4D-204ENST00000586417 B3GALNT2Q8NCR0 500 aa21.51■■□□□ 1.03
ATG4D-204ENST00000586417 STK32AQ8WU08 396 aa21.51■■□□□ 1.03
ATG4D-204ENST00000586417 DDX47Q9H0S4 455 aaKnown RBP21.51■■□□□ 1.03
ATG4D-204ENST00000586417 SART1O43290 800 aaKnown RBP21.5■■□□□ 1.03
ATG4D-204ENST00000586417 RAD51CO43502 376 aa21.5■■□□□ 1.03
ATG4D-204ENST00000586417 MCM3P25205 808 aa21.5■■□□□ 1.03
ATG4D-204ENST00000586417 TKTP29401 623 aaKnown RBP21.5■■□□□ 1.03
ATG4D-204ENST00000586417 BRCC3P46736 316 aa21.5■■□□□ 1.03
ATG4D-204ENST00000586417 RGS7P49802 495 aa21.5■■□□□ 1.03
ATG4D-204ENST00000586417 BCAR1P56945 870 aa21.5■■□□□ 1.03
ATG4D-204ENST00000586417 DCLRE1AQ6PJP8 1040 aa21.5■■□□□ 1.03
ATG4D-204ENST00000586417 FAM183BPQ6ZVS7 135 aa21.5■■□□□ 1.03
ATG4D-204ENST00000586417 TMEM110Q86TL2 294 aa21.5■■□□□ 1.03
ATG4D-204ENST00000586417 SLC13A5Q86YT5 568 aaPredicted RBP21.5■■□□□ 1.03
ATG4D-204ENST00000586417 TMEM86AQ8N2M4 240 aa21.5■■□□□ 1.03
ATG4D-204ENST00000586417 RSPH1Q8WYR4 309 aa21.5■■□□□ 1.03
ATG4D-204ENST00000586417 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.5■■□□□ 1.03
ATG4D-204ENST00000586417 INSL6Q9Y581 213 aa21.5■■□□□ 1.03
ATG4D-204ENST00000586417 TSC2P49815 1807 aa21.49■■□□□ 1.03
ATG4D-204ENST00000586417 TLL1O43897 1013 aa21.49■■□□□ 1.03
ATG4D-204ENST00000586417 ATP2C2O75185 946 aa21.49■■□□□ 1.03
ATG4D-204ENST00000586417 ALDH2P05091 517 aa21.49■■□□□ 1.03
ATG4D-204ENST00000586417 GLI1P08151 1106 aa21.49■■□□□ 1.03
ATG4D-204ENST00000586417 MYOGP15173 224 aa21.49■■□□□ 1.03
ATG4D-204ENST00000586417 ADORA2BP29275 332 aa21.49■■□□□ 1.03
ATG4D-204ENST00000586417 CCDC142Q17RM4 750 aa21.49■■□□□ 1.03
ATG4D-204ENST00000586417 TIGD5Q53EQ6 642 aa21.49■■□□□ 1.03
ATG4D-204ENST00000586417 BEND6Q5SZJ8 279 aaPredicted RBP21.49■■□□□ 1.03
ATG4D-204ENST00000586417 KIAA0319Q5VV43 1072 aa21.49■■□□□ 1.03
ATG4D-204ENST00000586417 ADAT2Q7Z6V5 191 aaKnown RBP21.49■■□□□ 1.03
ATG4D-204ENST00000586417 KATNAL2Q8IYT4 538 aa21.49■■□□□ 1.03
ATG4D-204ENST00000586417 EMC1Q8N766 993 aa21.49■■□□□ 1.03
ATG4D-204ENST00000586417 SLC2A14Q8TDB8 520 aa21.49■■□□□ 1.03
ATG4D-204ENST00000586417 BCL7CQ8WUZ0 217 aaPredicted RBP21.49■■□□□ 1.03
ATG4D-204ENST00000586417 PIWIL1Q96J94 861 aaKnown RBP21.49■■□□□ 1.03
ATG4D-204ENST00000586417 RAD9AQ99638 391 aa21.49■■□□□ 1.03
ATG4D-204ENST00000586417 HINFPQ9BQA5 517 aa21.49■■□□□ 1.03
ATG4D-204ENST00000586417 DNAI2Q9GZS0 605 aa21.49■■□□□ 1.03
ATG4D-204ENST00000586417 MIS12Q9H081 205 aa21.49■■□□□ 1.03
ATG4D-204ENST00000586417 ARFGAP3Q9NP61 516 aa21.49■■□□□ 1.03
ATG4D-204ENST00000586417 TCRBV7S2A1N4TA0A589 114 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms