RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 PCSK1P29120 753 aa12.72□□□□□ -0.37
BRCA1-225ENST00000586385 LHX1P48742 406 aa12.72□□□□□ -0.37
BRCA1-225ENST00000586385 CACNA2D1P54289 1103 aa12.72□□□□□ -0.37
BRCA1-225ENST00000586385 SLC7A9P82251 487 aa12.72□□□□□ -0.37
BRCA1-225ENST00000586385 FOXC1Q12948 553 aa12.72□□□□□ -0.37
BRCA1-225ENST00000586385 KCNB1Q14721 858 aa12.72□□□□□ -0.37
BRCA1-225ENST00000586385 CRY1Q16526 586 aa12.72□□□□□ -0.37
BRCA1-225ENST00000586385 EMC10Q5UCC4 262 aa12.72□□□□□ -0.37
BRCA1-225ENST00000586385 ADGRG2Q8IZP9 1017 aa12.72□□□□□ -0.37
BRCA1-225ENST00000586385 KDF1Q8NAX2 398 aaPredicted RBP12.72□□□□□ -0.37
BRCA1-225ENST00000586385 RLN3Q8WXF3 142 aa12.72□□□□□ -0.37
BRCA1-225ENST00000586385 GATA6Q92908 595 aa12.72□□□□□ -0.37
BRCA1-225ENST00000586385 SPATA17Q96L03 361 aa12.72□□□□□ -0.37
BRCA1-225ENST00000586385 CLIC6Q96NY7 704 aa12.72□□□□□ -0.37
BRCA1-225ENST00000586385 FNBP1Q96RU3 617 aa12.72□□□□□ -0.37
BRCA1-225ENST00000586385 TTLL2Q9BWV7 592 aa12.72□□□□□ -0.37
BRCA1-225ENST00000586385 PCIF1Q9H4Z3 704 aa12.72□□□□□ -0.37
BRCA1-225ENST00000586385 OLFML3Q9NRN5 406 aa12.72□□□□□ -0.37
BRCA1-225ENST00000586385 MBD1Q9UIS9 605 aaPredicted RBP12.72□□□□□ -0.37
BRCA1-225ENST00000586385 FAM208BQ5VWN6 2430 aa12.72□□□□□ -0.37
BRCA1-225ENST00000586385 TCHHQ07283 1943 aa12.72□□□□□ -0.37
BRCA1-225ENST00000586385 SPEGQ15772 3267 aa12.72□□□□□ -0.37
BRCA1-225ENST00000586385 ZFYVE26Q68DK2 2539 aa12.71□□□□□ -0.37
BRCA1-225ENST00000586385 ANAPC1Q9H1A4 1944 aa12.71□□□□□ -0.37
BRCA1-225ENST00000586385 SGK1O00141 431 aa12.71□□□□□ -0.37
BRCA1-225ENST00000586385 KHNYNO15037 678 aaKnown RBP12.71□□□□□ -0.37
BRCA1-225ENST00000586385 ADAM23O75077 832 aa12.71□□□□□ -0.37
BRCA1-225ENST00000586385 PRPF6O94906 941 aaKnown RBP12.71□□□□□ -0.37
BRCA1-225ENST00000586385 NFATC1O95644 943 aa12.71□□□□□ -0.37
BRCA1-225ENST00000586385 OAS1P00973 400 aaKnown RBP12.71□□□□□ -0.37
BRCA1-225ENST00000586385 KRT19P08727 400 aa12.71□□□□□ -0.37
BRCA1-225ENST00000586385 PDGFRBP09619 1106 aa12.71□□□□□ -0.37
BRCA1-225ENST00000586385 GAP43P17677 238 aa12.71□□□□□ -0.37
BRCA1-225ENST00000586385 CSRP1P21291 193 aaKnown RBP12.71□□□□□ -0.37
BRCA1-225ENST00000586385 HOXD13P35453 343 aa12.71□□□□□ -0.37
BRCA1-225ENST00000586385 P2RY2P41231 377 aa12.71□□□□□ -0.37
BRCA1-225ENST00000586385 KIR2DL1P43626 348 aaPredicted RBP12.71□□□□□ -0.37
BRCA1-225ENST00000586385 DHCR24Q15392 516 aa12.71□□□□□ -0.37
BRCA1-225ENST00000586385 USP39Q53GS9 565 aaKnown RBP12.71□□□□□ -0.37
BRCA1-225ENST00000586385 LARP1BQ659C4 914 aaKnown RBP12.71□□□□□ -0.37
BRCA1-225ENST00000586385 CYP2U1Q7Z449 544 aa12.71□□□□□ -0.37
BRCA1-225ENST00000586385 BRAPQ7Z569 592 aa12.71□□□□□ -0.37
BRCA1-225ENST00000586385 FILIP1Q7Z7B0 1213 aa12.71□□□□□ -0.37
BRCA1-225ENST00000586385 CBWD2Q8IUF1 395 aa12.71□□□□□ -0.37
BRCA1-225ENST00000586385 PHTF2Q8N3S3 785 aa12.71□□□□□ -0.37
BRCA1-225ENST00000586385 ALLCQ8N6M5 410 aa12.71□□□□□ -0.37
BRCA1-225ENST00000586385 IL17RCQ8NAC3 791 aa12.71□□□□□ -0.37
BRCA1-225ENST00000586385 CACTINQ8WUQ7 758 aaKnown RBP12.71□□□□□ -0.37
BRCA1-225ENST00000586385 EXOC4Q96A65 974 aa12.71□□□□□ -0.37
BRCA1-225ENST00000586385 PCED1BQ96HM7 432 aa12.71□□□□□ -0.37
BRCA1-225ENST00000586385 ZDHHC4Q9NPG8 344 aa12.71□□□□□ -0.37
BRCA1-225ENST00000586385 TMEM9BQ9NQ34 198 aa12.71□□□□□ -0.37
BRCA1-225ENST00000586385 TMEM74BQ9NUR3 256 aa12.71□□□□□ -0.37
BRCA1-225ENST00000586385 INTS13Q9NVM9 706 aa12.71□□□□□ -0.37
BRCA1-225ENST00000586385 CDH9Q9ULB4 789 aa12.71□□□□□ -0.37
BRCA1-225ENST00000586385 EXOC7Q9UPT5 735 aa12.71□□□□□ -0.37
BRCA1-225ENST00000586385 SMC3Q9UQE7 1217 aa12.71□□□□□ -0.37
BRCA1-225ENST00000586385 CACNA1EQ15878 2313 aa12.7□□□□□ -0.38
BRCA1-225ENST00000586385 F8VP50 259 aa12.7□□□□□ -0.38
BRCA1-225ENST00000586385 TULP1O00294 542 aaPredicted RBP12.7□□□□□ -0.38
BRCA1-225ENST00000586385 CEACAM1P13688 526 aa12.7□□□□□ -0.38
BRCA1-225ENST00000586385 WARSP23381 471 aaKnown RBP12.7□□□□□ -0.38
BRCA1-225ENST00000586385 PTGER3P43115 390 aa12.7□□□□□ -0.38
BRCA1-225ENST00000586385 DHPSP49366 369 aaPredicted RBP12.7□□□□□ -0.38
BRCA1-225ENST00000586385 NR1H3Q13133 447 aa12.7□□□□□ -0.38
BRCA1-225ENST00000586385 MAP7D1Q3KQU3 841 aa12.7□□□□□ -0.38
BRCA1-225ENST00000586385 DAB2IPQ5VWQ8 1189 aa12.7□□□□□ -0.38
BRCA1-225ENST00000586385 ERICH6BQ5W0A0 696 aa12.7□□□□□ -0.38
BRCA1-225ENST00000586385 FAM173BQ6P4H8 233 aa12.7□□□□□ -0.38
BRCA1-225ENST00000586385 RHBDF2Q6PJF5 856 aa12.7□□□□□ -0.38
BRCA1-225ENST00000586385 VSTM1Q6UX27 236 aa12.7□□□□□ -0.38
BRCA1-225ENST00000586385 DENND5BQ6ZUT9 1274 aa12.7□□□□□ -0.38
BRCA1-225ENST00000586385 DPH6Q7L8W6 267 aa12.7□□□□□ -0.38
BRCA1-225ENST00000586385 FSIP1Q8NA03 581 aa12.7□□□□□ -0.38
BRCA1-225ENST00000586385 TXNDC5Q8NBS9 432 aaKnown RBP12.7□□□□□ -0.38
BRCA1-225ENST00000586385 DEFB124Q8NES8 71 aa12.7□□□□□ -0.38
BRCA1-225ENST00000586385 PIGKQ92643 395 aa12.7□□□□□ -0.38
BRCA1-225ENST00000586385 HPS3Q969F9 1004 aa12.7□□□□□ -0.38
BRCA1-225ENST00000586385 HPDLQ96IR7 371 aa12.7□□□□□ -0.38
BRCA1-225ENST00000586385 MRPL45Q9BRJ2 306 aaKnown RBP12.7□□□□□ -0.38
BRCA1-225ENST00000586385 ADAM33Q9BZ11 813 aa12.7□□□□□ -0.38
BRCA1-225ENST00000586385 SMPD4Q9NXE4 827 aa12.7□□□□□ -0.38
BRCA1-225ENST00000586385 MAGEC2Q9UBF1 373 aaPredicted RBP12.7□□□□□ -0.38
BRCA1-225ENST00000586385 EVLQ9UI08 416 aaPredicted RBP12.7□□□□□ -0.38
BRCA1-225ENST00000586385 HCN2Q9UL51 889 aa12.7□□□□□ -0.38
BRCA1-225ENST00000586385 SRPRBQ9Y5M8 271 aaKnown RBP12.7□□□□□ -0.38
BRCA1-225ENST00000586385 CPQQ9Y646 472 aa12.7□□□□□ -0.38
BRCA1-225ENST00000586385 ZNF638Q14966 1978 aaKnown RBP12.7□□□□□ -0.38
BRCA1-225ENST00000586385 PTPRDP23468 1912 aa12.69□□□□□ -0.38
BRCA1-225ENST00000586385 A0A0A0MRY4 1105 aa12.69□□□□□ -0.38
BRCA1-225ENST00000586385 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.69□□□□□ -0.38
BRCA1-225ENST00000586385 KLF8O95600 359 aaPredicted RBP12.69□□□□□ -0.38
BRCA1-225ENST00000586385 LDHAP00338 332 aaKnown RBP12.69□□□□□ -0.38
BRCA1-225ENST00000586385 TMEM191BP0C7N4 346 aa12.69□□□□□ -0.38
BRCA1-225ENST00000586385 PFKLP17858 780 aa12.69□□□□□ -0.38
BRCA1-225ENST00000586385 GRIK1P39086 918 aa12.69□□□□□ -0.38
BRCA1-225ENST00000586385 NOP14P78316 857 aaKnown RBP12.69□□□□□ -0.38
BRCA1-225ENST00000586385 MRPS21P82921 87 aaKnown RBP12.69□□□□□ -0.38
BRCA1-225ENST00000586385 MDH1BQ5I0G3 518 aa12.69□□□□□ -0.38
BRCA1-225ENST00000586385 RRAGBQ5VZM2 374 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms