RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 FAM171BQ6P995 826 aa13.38□□□□□ -0.27
VMP1-202ENST00000585847 RBM23Q86U06 439 aaKnown RBP13.38□□□□□ -0.27
VMP1-202ENST00000585847 NOP9Q86U38 636 aaKnown RBP13.38□□□□□ -0.27
VMP1-202ENST00000585847 SLC47A2Q86VL8 602 aa13.38□□□□□ -0.27
VMP1-202ENST00000585847 METTL23Q86XA0 190 aa13.38□□□□□ -0.27
VMP1-202ENST00000585847 OR6B3Q8NGW1 331 aa13.38□□□□□ -0.27
VMP1-202ENST00000585847 FEZF2Q8TBJ5 459 aa13.38□□□□□ -0.27
VMP1-202ENST00000585847 DDX1Q92499 740 aaKnown RBP13.38□□□□□ -0.27
VMP1-202ENST00000585847 ACBD6Q9BR61 282 aa13.38□□□□□ -0.27
VMP1-202ENST00000585847 LHX5Q9H2C1 402 aa13.38□□□□□ -0.27
VMP1-202ENST00000585847 CRISPLD1Q9H336 500 aa13.38□□□□□ -0.27
VMP1-202ENST00000585847 LZTFL1Q9NQ48 299 aa13.38□□□□□ -0.27
VMP1-202ENST00000585847 AVENQ9NQS1 362 aaPredicted RBP13.38□□□□□ -0.27
VMP1-202ENST00000585847 UVRAGQ9P2Y5 699 aa13.38□□□□□ -0.27
VMP1-202ENST00000585847 GTF3C4Q9UKN8 822 aa13.38□□□□□ -0.27
VMP1-202ENST00000585847 STRIP2Q9ULQ0 834 aa13.38□□□□□ -0.27
VMP1-202ENST00000585847 DOCK6Q96HP0 2047 aa13.38□□□□□ -0.27
VMP1-202ENST00000585847 USP27XA6NNY8 438 aa13.37□□□□□ -0.27
VMP1-202ENST00000585847 LINC01565O15544 149 aa13.37□□□□□ -0.27
VMP1-202ENST00000585847 TGM5O43548 720 aa13.37□□□□□ -0.27
VMP1-202ENST00000585847 MTA2O94776 668 aa13.37□□□□□ -0.27
VMP1-202ENST00000585847 CALCAP01258 141 aa13.37□□□□□ -0.27
VMP1-202ENST00000585847 CYP1A1P04798 512 aaPredicted RBP13.37□□□□□ -0.27
VMP1-202ENST00000585847 CALB1P05937 261 aa13.37□□□□□ -0.27
VMP1-202ENST00000585847 PNMA6AP0CW24 399 aaPredicted RBP13.37□□□□□ -0.27
VMP1-202ENST00000585847 VDRP11473 427 aa13.37□□□□□ -0.27
VMP1-202ENST00000585847 CD58P19256 250 aa13.37□□□□□ -0.27
VMP1-202ENST00000585847 CDH5P33151 784 aaPredicted RBP13.37□□□□□ -0.27
VMP1-202ENST00000585847 NRIP1P48552 1158 aa13.37□□□□□ -0.27
VMP1-202ENST00000585847 NDUFV1P49821 464 aa13.37□□□□□ -0.27
VMP1-202ENST00000585847 CDR1P51861 262 aa13.37□□□□□ -0.27
VMP1-202ENST00000585847 TERF1P54274 439 aa13.37□□□□□ -0.27
VMP1-202ENST00000585847 RAD23BP54727 409 aa13.37□□□□□ -0.27
VMP1-202ENST00000585847 PSMC1P62191 440 aaKnown RBP13.37□□□□□ -0.27
VMP1-202ENST00000585847 FMO1Q01740 532 aa13.37□□□□□ -0.27
VMP1-202ENST00000585847 GPR17Q13304 367 aa13.37□□□□□ -0.27
VMP1-202ENST00000585847 CLEC16AQ2KHT3 1053 aa13.37□□□□□ -0.27
VMP1-202ENST00000585847 RNF19BQ6ZMZ0 732 aa13.37□□□□□ -0.27
VMP1-202ENST00000585847 PAQR9Q6ZVX9 377 aa13.37□□□□□ -0.27
VMP1-202ENST00000585847 PALB2Q86YC2 1186 aa13.37□□□□□ -0.27
VMP1-202ENST00000585847 CRYBG2Q8N1P7 616 aa13.37□□□□□ -0.27
VMP1-202ENST00000585847 THEM5Q8N1Q8 247 aa13.37□□□□□ -0.27
VMP1-202ENST00000585847 TTC9BQ8N6N2 239 aa13.37□□□□□ -0.27
VMP1-202ENST00000585847 SLC4A11Q8NBS3 891 aa13.37□□□□□ -0.27
VMP1-202ENST00000585847 TMEM35BQ8NCS4 154 aa13.37□□□□□ -0.27
VMP1-202ENST00000585847 TMEM176AQ96HP8 235 aa13.37□□□□□ -0.27
VMP1-202ENST00000585847 SYT15Q9BQS2 421 aa13.37□□□□□ -0.27
VMP1-202ENST00000585847 OXCT2Q9BYC2 517 aaPredicted RBP13.37□□□□□ -0.27
VMP1-202ENST00000585847 CDH9Q9ULB4 789 aa13.37□□□□□ -0.27
VMP1-202ENST00000585847 JRKLQ9Y4A0 524 aa13.37□□□□□ -0.27
VMP1-202ENST00000585847 ARIH1Q9Y4X5 557 aaPredicted RBP13.37□□□□□ -0.27
VMP1-202ENST00000585847 SCINQ9Y6U3 715 aa13.37□□□□□ -0.27
VMP1-202ENST00000585847 MTMR11A4FU01 709 aa13.36□□□□□ -0.27
VMP1-202ENST00000585847 CTAGE9A4FU28 777 aa13.36□□□□□ -0.27
VMP1-202ENST00000585847 A8MXQ7 604 aa13.36□□□□□ -0.27
VMP1-202ENST00000585847 SEC24AO95486 1093 aa13.36□□□□□ -0.27
VMP1-202ENST00000585847 EPCAMP16422 314 aa13.36□□□□□ -0.27
VMP1-202ENST00000585847 PTPN1P18031 435 aaKnown RBP13.36□□□□□ -0.27
VMP1-202ENST00000585847 KLRC2P26717 231 aa13.36□□□□□ -0.27
VMP1-202ENST00000585847 CA8P35219 290 aa13.36□□□□□ -0.27
VMP1-202ENST00000585847 ARPP19P56211 112 aa13.36□□□□□ -0.27
VMP1-202ENST00000585847 GPC5P78333 572 aa13.36□□□□□ -0.27
VMP1-202ENST00000585847 CYP27A1Q02318 531 aa13.36□□□□□ -0.27
VMP1-202ENST00000585847 CLUL1Q15846 466 aa13.36□□□□□ -0.27
VMP1-202ENST00000585847 LIN9Q5TKA1 542 aa13.36□□□□□ -0.27
VMP1-202ENST00000585847 ACAD10Q6JQN1 1059 aa13.36□□□□□ -0.27
VMP1-202ENST00000585847 ACOT1Q86TX2 421 aa13.36□□□□□ -0.27
VMP1-202ENST00000585847 PHF13Q86YI8 300 aaPredicted RBP13.36□□□□□ -0.27
VMP1-202ENST00000585847 NAPGQ99747 312 aaPredicted RBP13.36□□□□□ -0.27
VMP1-202ENST00000585847 ZSWIM1Q9BR11 485 aa13.36□□□□□ -0.27
VMP1-202ENST00000585847 EMILIN2Q9BXX0 1053 aa13.36□□□□□ -0.27
VMP1-202ENST00000585847 SNX25Q9H3E2 840 aa13.36□□□□□ -0.27
VMP1-202ENST00000585847 TLE6Q9H808 572 aa13.36□□□□□ -0.27
VMP1-202ENST00000585847 MRPL47Q9HD33 250 aaKnown RBP13.36□□□□□ -0.27
VMP1-202ENST00000585847 CYLDQ9NQC7 956 aa13.36□□□□□ -0.27
VMP1-202ENST00000585847 SEPT11Q9NVA2 429 aaKnown RBP13.36□□□□□ -0.27
VMP1-202ENST00000585847 WDR35Q9P2L0 1181 aa13.36□□□□□ -0.27
VMP1-202ENST00000585847 FBXW11Q9UKB1 542 aa13.36□□□□□ -0.27
VMP1-202ENST00000585847 HCFC2Q9Y5Z7 792 aa13.36□□□□□ -0.27
VMP1-202ENST00000585847 GREB1Q4ZG55 1949 aa13.36□□□□□ -0.27
VMP1-202ENST00000585847 NOTCH4Q99466 2003 aa13.35□□□□□ -0.27
VMP1-202ENST00000585847 MYH10P35580 1976 aa13.35□□□□□ -0.27
VMP1-202ENST00000585847 C2orf16Q68DN1 1984 aa13.35□□□□□ -0.27
VMP1-202ENST00000585847 FAM86C2PA6NEL3 165 aa13.35□□□□□ -0.27
VMP1-202ENST00000585847 THAP12O43422 761 aa13.35□□□□□ -0.27
VMP1-202ENST00000585847 ADH1AP07327 375 aa13.35□□□□□ -0.27
VMP1-202ENST00000585847 SPATA31D3P0C874 917 aa13.35□□□□□ -0.27
VMP1-202ENST00000585847 UNGP13051 313 aaPredicted RBP13.35□□□□□ -0.27
VMP1-202ENST00000585847 PCSK1P29120 753 aa13.35□□□□□ -0.27
VMP1-202ENST00000585847 CASQ1P31415 396 aa13.35□□□□□ -0.27
VMP1-202ENST00000585847 LTBRP36941 435 aa13.35□□□□□ -0.27
VMP1-202ENST00000585847 GSCP56915 257 aaPredicted RBP13.35□□□□□ -0.27
VMP1-202ENST00000585847 SLC8A3P57103 927 aa13.35□□□□□ -0.27
VMP1-202ENST00000585847 CREMQ03060 361 aa13.35□□□□□ -0.27
VMP1-202ENST00000585847 ADAM15Q13444 863 aa13.35□□□□□ -0.27
VMP1-202ENST00000585847 MAPRE1Q15691 268 aaKnown RBP13.35□□□□□ -0.27
VMP1-202ENST00000585847 CNGA2Q16280 664 aa13.35□□□□□ -0.27
VMP1-202ENST00000585847 CTC1Q2NKJ3 1217 aa13.35□□□□□ -0.27
VMP1-202ENST00000585847 SLC39A12Q504Y0 691 aa13.35□□□□□ -0.27
VMP1-202ENST00000585847 ZNF394Q53GI3 561 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms