RNA–Protein interactions for RNA: ENST00000585726.5

RETREG3-202, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 522 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-202ENST00000585726 GOLGA7BQ2TAP0 167 aa22.72■■□□□ 1.23
RETREG3-202ENST00000585726 ARHGAP17Q68EM7 881 aa22.72■■□□□ 1.23
RETREG3-202ENST00000585726 DPY19L2P1Q6NXN4 242 aa22.72■■□□□ 1.23
RETREG3-202ENST00000585726 CLEC20AQ6ZU45 233 aa22.72■■□□□ 1.23
RETREG3-202ENST00000585726 ZDHHC14Q8IZN3 488 aa22.72■■□□□ 1.23
RETREG3-202ENST00000585726 ZMIZ2Q8NF64 920 aa22.72■■□□□ 1.23
RETREG3-202ENST00000585726 SLITRK6Q9H5Y7 841 aa22.72■■□□□ 1.23
RETREG3-202ENST00000585726 IL21Q9HBE4 155 aa22.72■■□□□ 1.23
RETREG3-202ENST00000585726 FAM207AQ9NSI2 230 aaPredicted RBP22.72■■□□□ 1.23
RETREG3-202ENST00000585726 FHOD1Q9Y613 1164 aa22.72■■□□□ 1.23
RETREG3-202ENST00000585726 FGF19O95750 216 aa22.71■■□□□ 1.23
RETREG3-202ENST00000585726 BRD2P25440 801 aaKnown RBP22.71■■□□□ 1.23
RETREG3-202ENST00000585726 CDC25CP30307 473 aa22.71■■□□□ 1.23
RETREG3-202ENST00000585726 PTPN21Q16825 1174 aa22.71■■□□□ 1.23
RETREG3-202ENST00000585726 FILIP1LQ4L180 1135 aa22.71■■□□□ 1.23
RETREG3-202ENST00000585726 STXBP5Q5T5C0 1151 aa22.71■■□□□ 1.23
RETREG3-202ENST00000585726 RNF135Q8IUD6 432 aa22.71■■□□□ 1.23
RETREG3-202ENST00000585726 NUP93Q8N1F7 819 aa22.71■■□□□ 1.23
RETREG3-202ENST00000585726 TFAP2BQ92481 460 aa22.71■■□□□ 1.23
RETREG3-202ENST00000585726 DUSP16Q9BY84 665 aa22.71■■□□□ 1.23
RETREG3-202ENST00000585726 CSNK1G1Q9HCP0 422 aa22.71■■□□□ 1.23
RETREG3-202ENST00000585726 EPS15L1Q9UBC2 864 aa22.71■■□□□ 1.23
RETREG3-202ENST00000585726 UXTQ9UBK9 157 aaPredicted RBP22.71■■□□□ 1.23
RETREG3-202ENST00000585726 TSPAN16Q9UKR8 245 aa22.71■■□□□ 1.23
RETREG3-202ENST00000585726 KIAA1257Q9ULG3 409 aa22.71■■□□□ 1.23
RETREG3-202ENST00000585726 NOTCH4Q99466 2003 aa22.7■■□□□ 1.23
RETREG3-202ENST00000585726 TEX33O43247 280 aa22.7■■□□□ 1.22
RETREG3-202ENST00000585726 ASGR2P07307 311 aa22.7■■□□□ 1.22
RETREG3-202ENST00000585726 PNMA6AP0CW24 399 aaPredicted RBP22.7■■□□□ 1.22
RETREG3-202ENST00000585726 NPR3P17342 541 aa22.7■■□□□ 1.22
RETREG3-202ENST00000585726 GPR158Q5T848 1215 aa22.7■■□□□ 1.22
RETREG3-202ENST00000585726 POTEHQ6S545 545 aa22.7■■□□□ 1.22
RETREG3-202ENST00000585726 RNF214Q8ND24 703 aa22.7■■□□□ 1.22
RETREG3-202ENST00000585726 UBA3Q8TBC4 463 aa22.7■■□□□ 1.22
RETREG3-202ENST00000585726 TRMT2BQ96GJ1 504 aaKnown RBP22.7■■□□□ 1.22
RETREG3-202ENST00000585726 CEP295NLQ96MC4 621 aa22.7■■□□□ 1.22
RETREG3-202ENST00000585726 ZSWIM3Q96MP5 696 aa22.7■■□□□ 1.22
RETREG3-202ENST00000585726 ACP6Q9NPH0 428 aa22.7■■□□□ 1.22
RETREG3-202ENST00000585726 HESX1Q9UBX0 185 aa22.7■■□□□ 1.22
RETREG3-202ENST00000585726 CNTN6Q9UQ52 1028 aa22.7■■□□□ 1.22
RETREG3-202ENST00000585726 PTPRDP23468 1912 aa22.7■■□□□ 1.22
RETREG3-202ENST00000585726 MICAL2O94851 1124 aa22.69■■□□□ 1.22
RETREG3-202ENST00000585726 F11P03951 625 aa22.69■■□□□ 1.22
RETREG3-202ENST00000585726 UCHL3P15374 230 aa22.69■■□□□ 1.22
RETREG3-202ENST00000585726 ZNF132P52740 706 aa22.69■■□□□ 1.22
RETREG3-202ENST00000585726 SLC5A3P53794 718 aa22.69■■□□□ 1.22
RETREG3-202ENST00000585726 DRAP1Q14919 205 aaPredicted RBP22.69■■□□□ 1.22
RETREG3-202ENST00000585726 ARHGAP15Q53QZ3 475 aa22.69■■□□□ 1.22
RETREG3-202ENST00000585726 GPIHBP1Q8IV16 184 aa22.69■■□□□ 1.22
RETREG3-202ENST00000585726 ANKRD52Q8NB46 1076 aa22.69■■□□□ 1.22
RETREG3-202ENST00000585726 SCAMP5Q8TAC9 235 aa22.69■■□□□ 1.22
RETREG3-202ENST00000585726 SHC3Q92529 594 aa22.69■■□□□ 1.22
RETREG3-202ENST00000585726 MYRFLQ96LU7 910 aa22.69■■□□□ 1.22
RETREG3-202ENST00000585726 NAP1L5Q96NT1 182 aaPredicted RBP22.69■■□□□ 1.22
RETREG3-202ENST00000585726 ZSWIM1Q9BR11 485 aa22.69■■□□□ 1.22
RETREG3-202ENST00000585726 PLCB1Q9NQ66 1216 aa22.69■■□□□ 1.22
RETREG3-202ENST00000585726 RTN4Q9NQC3 1192 aaKnown RBP22.69■■□□□ 1.22
RETREG3-202ENST00000585726 GDE1Q9NZC3 331 aa22.69■■□□□ 1.22
RETREG3-202ENST00000585726 EHD2Q9NZN4 543 aa22.69■■□□□ 1.22
RETREG3-202ENST00000585726 SIK3Q9Y2K2 1263 aa22.69■■□□□ 1.22
RETREG3-202ENST00000585726 ZFP37Q9Y6Q3 630 aaPredicted RBP22.69■■□□□ 1.22
RETREG3-202ENST00000585726 O00370 1275 aa22.68■■□□□ 1.22
RETREG3-202ENST00000585726 FOXN3O00409 490 aaPredicted RBP22.68■■□□□ 1.22
RETREG3-202ENST00000585726 CYP26A1O43174 497 aa22.68■■□□□ 1.22
RETREG3-202ENST00000585726 ABL1P00519 1130 aa22.68■■□□□ 1.22
RETREG3-202ENST00000585726 YWHAQP27348 245 aa22.68■■□□□ 1.22
RETREG3-202ENST00000585726 SLC8A3P57103 927 aa22.68■■□□□ 1.22
RETREG3-202ENST00000585726 POLR2FP61218 127 aaKnown RBP22.68■■□□□ 1.22
RETREG3-202ENST00000585726 FANCCQ00597 558 aa22.68■■□□□ 1.22
RETREG3-202ENST00000585726 TMEM150AQ86TG1 271 aa22.68■■□□□ 1.22
RETREG3-202ENST00000585726 TTC30AQ86WT1 665 aa22.68■■□□□ 1.22
RETREG3-202ENST00000585726 NEK11Q8NG66 645 aa22.68■■□□□ 1.22
RETREG3-202ENST00000585726 RSAD2Q8WXG1 361 aa22.68■■□□□ 1.22
RETREG3-202ENST00000585726 GANQ9H2C0 597 aa22.68■■□□□ 1.22
RETREG3-202ENST00000585726 TNFRSF10BO14763 440 aa22.67■■□□□ 1.22
RETREG3-202ENST00000585726 EPHB6O15197 1021 aa22.67■■□□□ 1.22
RETREG3-202ENST00000585726 THAP12O43422 761 aa22.67■■□□□ 1.22
RETREG3-202ENST00000585726 RTN3O95197 1032 aaPredicted RBP22.67■■□□□ 1.22
RETREG3-202ENST00000585726 GNA15P30679 374 aa22.67■■□□□ 1.22
RETREG3-202ENST00000585726 ZNF445P59923 1031 aa22.67■■□□□ 1.22
RETREG3-202ENST00000585726 TAF10Q12962 218 aa22.67■■□□□ 1.22
RETREG3-202ENST00000585726 PARM1Q6UWI2 310 aa22.67■■□□□ 1.22
RETREG3-202ENST00000585726 GPRIN1Q7Z2K8 1008 aa22.67■■□□□ 1.22
RETREG3-202ENST00000585726 MRPS31Q92665 395 aaKnown RBP22.67■■□□□ 1.22
RETREG3-202ENST00000585726 FBXO32Q969P5 355 aa22.67■■□□□ 1.22
RETREG3-202ENST00000585726 ERGIC2Q96RQ1 377 aa22.67■■□□□ 1.22
RETREG3-202ENST00000585726 TTLL2Q9BWV7 592 aa22.67■■□□□ 1.22
RETREG3-202ENST00000585726 KCNK12Q9HB15 430 aa22.67■■□□□ 1.22
RETREG3-202ENST00000585726 TRPC7Q9HCX4 862 aa22.67■■□□□ 1.22
RETREG3-202ENST00000585726 NLRC4Q9NPP4 1024 aa22.67■■□□□ 1.22
RETREG3-202ENST00000585726 MUTYHQ9UIF7 546 aa22.67■■□□□ 1.22
RETREG3-202ENST00000585726 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.67■■□□□ 1.22
RETREG3-202ENST00000585726 HHLA1C9JL84 531 aa22.66■■□□□ 1.22
RETREG3-202ENST00000585726 M0QYV0 167 aa22.66■■□□□ 1.22
RETREG3-202ENST00000585726 TADA3O75528 432 aa22.66■■□□□ 1.22
RETREG3-202ENST00000585726 RFX1P22670 979 aa22.66■■□□□ 1.22
RETREG3-202ENST00000585726 BCAT1P54687 386 aa22.66■■□□□ 1.22
RETREG3-202ENST00000585726 PDE4CQ08493 712 aa22.66■■□□□ 1.22
RETREG3-202ENST00000585726 CNGA2Q16280 664 aa22.66■■□□□ 1.22
RETREG3-202ENST00000585726 FAM78AQ5JUQ0 283 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms