RNA–Protein interactions for RNA: ENST00000585685.5

APOC4-APOC2-201, Transcript of APOC4-APOC2 readthrough (NMD candidate), humanhuman

TSL 5

Gene APOC4-APOC2, Length 1,829 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-APOC2-201ENST00000585685 GBA2Q9HCG7 927 aaPredicted RBP17.29■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 SAMD15Q9P1V8 674 aa17.29■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 TBK1Q9UHD2 729 aa17.29■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 CAPN7Q9Y6W3 813 aa17.29■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 GOLGA6L7A0A1B0GV03 622 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 EXOC1LA0A1B0GW35 172 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 E5RJQ4 531 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 SMAPO00193 183 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 VIMP08670 466 aaKnown RBP17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 PSMC4P43686 418 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 CTCFP49711 727 aaPredicted RBP17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 CDC42EP1Q00587 391 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 FASTKD3Q14CZ7 662 aaKnown RBP17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 RASA2Q15283 850 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 TAF5Q15542 800 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 PKDCCQ504Y2 493 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 TRNP1Q6NT89 227 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 FAM183BPQ6ZVS7 135 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 CYP4V2Q6ZWL3 525 aaPredicted RBP17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 RFX6Q8HWS3 928 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 NAT8LQ8N9F0 302 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 CKAP2Q8WWK9 683 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 CPT1BQ92523 772 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 CCT6BQ92526 530 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 KCNK9Q9NPC2 374 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 DPYSL4O14531 572 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 NPTXRO95502 500 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 GHRP10912 638 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 HOXA11P31270 313 aaPredicted RBP17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 RDXP35241 583 aaKnown RBP17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 MPP2Q14168 576 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 LRRC14Q15048 493 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 PCBP1Q15365 356 aaKnown RBP eCLIP17.28■□□□□ 0.362e-28■■■■■ 47
APOC4-APOC2-201ENST00000585685 ZBTB6Q15916 424 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 ANKRD20A8PQ5CZ79 823 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 OR6B2Q6IFH4 312 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 SLC27A1Q6PCB7 646 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 ARHGEF18Q6ZSZ5 1173 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 DPH6Q7L8W6 267 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 CCDC13Q8IYE1 715 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 ZBED8Q8IZ13 594 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 RXFP2Q8WXD0 754 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 RSAD2Q8WXG1 361 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 HSPH1Q92598 858 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 SNX27Q96L92 541 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 GCOM2Q9BZD3 368 aaPredicted RBP17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 UBN1Q9NPG3 1134 aa17.28■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 FOXO6A8MYZ6 492 aa17.27■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 GPR32O75388 356 aa17.27■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 SETSIPP0DME0 302 aa17.27■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 PDGFRAP16234 1089 aa17.27■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 RPL22P35268 128 aaKnown RBP17.27■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 PDIA2Q13087 525 aaKnown RBP17.27■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 TMED2Q15363 201 aa17.27■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 HIF1AQ16665 826 aa17.27■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 KIZQ2M2Z5 673 aa17.27■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 GOLGA7BQ2TAP0 167 aa17.27■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 TRABD2AQ86V40 505 aa17.27■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 SRRM1Q8IYB3 904 aaKnown RBP17.27■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 CNPY4Q8N129 248 aa17.27■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 MGARPQ8TDB4 240 aa17.27■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 KAT2BQ92831 832 aa17.27■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 ZMAT2Q96NC0 199 aaKnown RBP17.27■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 SETD4Q9NVD3 440 aa17.27■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 SNTG2Q9NY99 539 aa17.27■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 FETUBQ9UGM5 382 aa17.27■□□□□ 0.36
APOC4-APOC2-201ENST00000585685 RASA4BC9J798 803 aa17.26■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 E7ESA3 106 aa17.26■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 MCF2LO15068 1137 aa17.26■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 RASA4O43374 803 aa17.26■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 OAS1P00973 400 aaKnown RBP17.26■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 EIF3EP60228 445 aaKnown RBP17.26■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 FAM110CQ1W6H9 321 aa17.26■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 FAM47CQ5HY64 1035 aa17.26■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 PPP1R26Q5T8A7 1209 aaPredicted RBP17.26■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 PPP1R21Q6ZMI0 780 aa17.26■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 PLEKHH3Q7Z736 793 aa17.26■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 UNC45BQ8IWX7 931 aa17.26■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 LRRC52Q8N7C0 313 aa17.26■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 C12orf29Q8N999 325 aa17.26■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 ANKRD42Q8N9B4 389 aa17.26■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 PIWIL1Q96J94 861 aaKnown RBP17.26■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 ELAC2Q9BQ52 826 aaKnown RBP17.26■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 MRPL45Q9BRJ2 306 aaKnown RBP17.26■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 CALN1Q9BXU9 219 aa17.26■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 SLC4A5Q9BY07 1137 aa17.26■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 CXCL16Q9H2A7 254 aa17.26■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 ZNF408Q9H9D4 720 aa17.26■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 SLC24A2Q9UI40 661 aa17.26■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 DOCK3Q8IZD9 2030 aa17.26■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 DCAF8L1A6NGE4 600 aa17.26■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 CCT8L1PA6NM43 557 aa17.26■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 ADCY6O43306 1168 aa17.26■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 SNX3O60493 162 aa17.26■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 RBP3P10745 1247 aa17.26■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 SLC18A1P54219 525 aa17.26■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 CDH6P55285 790 aa17.26■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 ARL4CP56559 192 aa17.26■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 MKRN3Q13064 507 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms