RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 NECTIN4Q96NY8 510 aa15.43■□□□□ 0.06
SCAMP4-209ENST00000585335 ASAH2Q9NR71 780 aa15.43■□□□□ 0.06
SCAMP4-209ENST00000585335 THEGQ9P2T0 379 aa15.43■□□□□ 0.06
SCAMP4-209ENST00000585335 SLC38A8A6NNN8 435 aa15.42■□□□□ 0.06
SCAMP4-209ENST00000585335 GOLGA6L6A8MZA4 724 aa15.42■□□□□ 0.06
SCAMP4-209ENST00000585335 ZNF197O14709 1029 aa15.42■□□□□ 0.06
SCAMP4-209ENST00000585335 XPO1O14980 1071 aaKnown RBP15.42■□□□□ 0.06
SCAMP4-209ENST00000585335 AP5Z1O43299 807 aa15.42■□□□□ 0.06
SCAMP4-209ENST00000585335 GPR15P49685 360 aa15.42■□□□□ 0.06
SCAMP4-209ENST00000585335 LEXMQ3ZCV2 418 aa15.42■□□□□ 0.06
SCAMP4-209ENST00000585335 CYP4A22Q5TCH4 519 aa15.42■□□□□ 0.06
SCAMP4-209ENST00000585335 CLEC20AQ6ZU45 233 aa15.42■□□□□ 0.06
SCAMP4-209ENST00000585335 DENND5BQ6ZUT9 1274 aa15.42■□□□□ 0.06
SCAMP4-209ENST00000585335 PDZD4Q76G19 769 aaPredicted RBP15.42■□□□□ 0.06
SCAMP4-209ENST00000585335 DRC7Q8IY82 874 aa15.42■□□□□ 0.06
SCAMP4-209ENST00000585335 NUP93Q8N1F7 819 aa15.42■□□□□ 0.06
SCAMP4-209ENST00000585335 ZNF707Q96C28 371 aaPredicted RBP15.42■□□□□ 0.06
SCAMP4-209ENST00000585335 NOX5Q96PH1 765 aa15.42■□□□□ 0.06
SCAMP4-209ENST00000585335 GCNAQ96QF7 691 aa15.42■□□□□ 0.06
SCAMP4-209ENST00000585335 SMOQ99835 787 aa15.42■□□□□ 0.06
SCAMP4-209ENST00000585335 CORO1BQ9BR76 489 aa15.42■□□□□ 0.06
SCAMP4-209ENST00000585335 UBXN6Q9BZV1 441 aa15.42■□□□□ 0.06
SCAMP4-209ENST00000585335 ZNHIT6Q9NWK9 470 aaKnown RBP15.42■□□□□ 0.06
SCAMP4-209ENST00000585335 COMMD8Q9NX08 183 aa15.42■□□□□ 0.06
SCAMP4-209ENST00000585335 PCDHGC3Q9UN70 934 aa15.42■□□□□ 0.06
SCAMP4-209ENST00000585335 PTPRDP23468 1912 aa15.42■□□□□ 0.06
SCAMP4-209ENST00000585335 CALCAP01258 141 aa15.41■□□□□ 0.06
SCAMP4-209ENST00000585335 GYPCP04921 128 aa15.41■□□□□ 0.06
SCAMP4-209ENST00000585335 CASP14P31944 242 aa15.41■□□□□ 0.06
SCAMP4-209ENST00000585335 CACNA2D1P54289 1103 aa15.41■□□□□ 0.06
SCAMP4-209ENST00000585335 SNX16P57768 344 aa15.41■□□□□ 0.06
SCAMP4-209ENST00000585335 PDE4CQ08493 712 aa15.41■□□□□ 0.06
SCAMP4-209ENST00000585335 PABPC1LQ4VXU2 614 aaKnown RBP15.41■□□□□ 0.06
SCAMP4-209ENST00000585335 SDHAF4Q5VUM1 108 aa15.41■□□□□ 0.06
SCAMP4-209ENST00000585335 GRASPQ7Z6J2 395 aaPredicted RBP15.41■□□□□ 0.06
SCAMP4-209ENST00000585335 DNAJB7Q7Z6W7 309 aaPredicted RBP15.41■□□□□ 0.06
SCAMP4-209ENST00000585335 TTC30AQ86WT1 665 aa15.41■□□□□ 0.06
SCAMP4-209ENST00000585335 CNGA4Q8IV77 575 aa15.41■□□□□ 0.06
SCAMP4-209ENST00000585335 MSANTD4Q8NCY6 345 aa15.41■□□□□ 0.06
SCAMP4-209ENST00000585335 UBA3Q8TBC4 463 aa15.41■□□□□ 0.06
SCAMP4-209ENST00000585335 GPR152Q8TDT2 470 aa15.41■□□□□ 0.06
SCAMP4-209ENST00000585335 EPS8L1Q8TE68 723 aa15.41■□□□□ 0.06
SCAMP4-209ENST00000585335 SYN2Q92777 582 aaPredicted RBP15.41■□□□□ 0.06
SCAMP4-209ENST00000585335 KCNK16Q96T55 309 aa15.41■□□□□ 0.06
SCAMP4-209ENST00000585335 S1PR5Q9H228 398 aa15.41■□□□□ 0.06
SCAMP4-209ENST00000585335 FBXO44Q9H4M3 255 aa15.41■□□□□ 0.06
SCAMP4-209ENST00000585335 GRPEL1Q9HAV7 217 aa15.41■□□□□ 0.06
SCAMP4-209ENST00000585335 ACP6Q9NPH0 428 aa15.41■□□□□ 0.06
SCAMP4-209ENST00000585335 AIPL1Q9NZN9 384 aa15.41■□□□□ 0.06
SCAMP4-209ENST00000585335 MAGED2Q9UNF1 606 aaPredicted RBP15.41■□□□□ 0.06
SCAMP4-209ENST00000585335 BZW2Q9Y6E2 419 aaKnown RBP15.41■□□□□ 0.06
SCAMP4-209ENST00000585335 ADCY5O95622 1261 aa15.4■□□□□ 0.06
SCAMP4-209ENST00000585335 LSM8O95777 96 aaKnown RBP15.4■□□□□ 0.06
SCAMP4-209ENST00000585335 RHOP08100 348 aa15.4■□□□□ 0.06
SCAMP4-209ENST00000585335 MYL4P12829 197 aa15.4■□□□□ 0.06
SCAMP4-209ENST00000585335 CDC25BP30305 580 aa15.4■□□□□ 0.06
SCAMP4-209ENST00000585335 CDC25CP30307 473 aa15.4■□□□□ 0.06
SCAMP4-209ENST00000585335 PLA2G4AP47712 749 aa15.4■□□□□ 0.06
SCAMP4-209ENST00000585335 SLC5A3P53794 718 aa15.4■□□□□ 0.06
SCAMP4-209ENST00000585335 CDR2Q01850 454 aa15.4■□□□□ 0.06
SCAMP4-209ENST00000585335 KLHL30Q0D2K2 578 aa15.4■□□□□ 0.06
SCAMP4-209ENST00000585335 TAF3Q5VWG9 929 aa15.4■□□□□ 0.06
SCAMP4-209ENST00000585335 TRIM72Q6ZMU5 477 aa15.4■□□□□ 0.06
SCAMP4-209ENST00000585335 NOP9Q86U38 636 aaKnown RBP15.4■□□□□ 0.06
SCAMP4-209ENST00000585335 VPS36Q86VN1 386 aa15.4■□□□□ 0.06
SCAMP4-209ENST00000585335 TMEM35BQ8NCS4 154 aa15.4■□□□□ 0.06
SCAMP4-209ENST00000585335 PDZD8Q8NEN9 1154 aa15.4■□□□□ 0.06
SCAMP4-209ENST00000585335 ANP32BQ92688 251 aaKnown RBP15.4■□□□□ 0.06
SCAMP4-209ENST00000585335 SECISBP2LQ93073 1101 aaKnown RBP15.4■□□□□ 0.06
SCAMP4-209ENST00000585335 TRMT2BQ96GJ1 504 aaKnown RBP15.4■□□□□ 0.06
SCAMP4-209ENST00000585335 SLITRK1Q96PX8 696 aa15.4■□□□□ 0.06
SCAMP4-209ENST00000585335 LHX5Q9H2C1 402 aa15.4■□□□□ 0.06
SCAMP4-209ENST00000585335 LRRC4Q9HBW1 653 aa15.4■□□□□ 0.06
SCAMP4-209ENST00000585335 AVENQ9NQS1 362 aaPredicted RBP15.4■□□□□ 0.06
SCAMP4-209ENST00000585335 USP15Q9Y4E8 981 aaPredicted RBP15.4■□□□□ 0.06
SCAMP4-209ENST00000585335 MYH10P35580 1976 aa15.4■□□□□ 0.06
SCAMP4-209ENST00000585335 SZT2Q5T011 3432 aa15.4■□□□□ 0.06
SCAMP4-209ENST00000585335 CLUHO75153 1309 aa15.4■□□□□ 0.06
SCAMP4-209ENST00000585335 AKR1B15C9JRZ8 316 aaPredicted RBP15.39■□□□□ 0.05
SCAMP4-209ENST00000585335 BEST1O76090 585 aa15.39■□□□□ 0.05
SCAMP4-209ENST00000585335 FSHRP23945 695 aa15.39■□□□□ 0.05
SCAMP4-209ENST00000585335 YWHAQP27348 245 aa15.39■□□□□ 0.05
SCAMP4-209ENST00000585335 SSTR3P32745 418 aaPredicted RBP15.39■□□□□ 0.05
SCAMP4-209ENST00000585335 ACADSBP45954 432 aa15.39■□□□□ 0.05
SCAMP4-209ENST00000585335 PPP3CCP48454 512 aa15.39■□□□□ 0.05
SCAMP4-209ENST00000585335 IFRD2Q12894 506 aaPredicted RBP15.39■□□□□ 0.05
SCAMP4-209ENST00000585335 CBX2Q14781 532 aaPredicted RBP15.39■□□□□ 0.05
SCAMP4-209ENST00000585335 PKDCCQ504Y2 493 aa15.39■□□□□ 0.05
SCAMP4-209ENST00000585335 ARHGAP15Q53QZ3 475 aa15.39■□□□□ 0.05
SCAMP4-209ENST00000585335 TDRD12Q587J7 1177 aaKnown RBP15.39■□□□□ 0.05
SCAMP4-209ENST00000585335 PTCRAQ6ISU1 281 aaPredicted RBP15.39■□□□□ 0.05
SCAMP4-209ENST00000585335 DENND1BQ6P3S1 775 aa15.39■□□□□ 0.05
SCAMP4-209ENST00000585335 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.39■□□□□ 0.05
SCAMP4-209ENST00000585335 PIGZQ86VD9 579 aa15.39■□□□□ 0.05
SCAMP4-209ENST00000585335 SIX6OS1Q8N1H7 587 aa15.39■□□□□ 0.05
SCAMP4-209ENST00000585335 ZMIZ2Q8NF64 920 aa15.39■□□□□ 0.05
SCAMP4-209ENST00000585335 OR8K1Q8NGG5 319 aa15.39■□□□□ 0.05
SCAMP4-209ENST00000585335 STK32AQ8WU08 396 aa15.39■□□□□ 0.05
SCAMP4-209ENST00000585335 HSFY1Q96LI6 401 aa15.39■□□□□ 0.05
SCAMP4-209ENST00000585335 ZSWIM1Q9BR11 485 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms