RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 ARHGAP18Q8N392 663 aa13.65□□□□□ -0.22
TRIM47-202ENST00000585333 SLC35F5Q8WV83 523 aa13.65□□□□□ -0.22
TRIM47-202ENST00000585333 SECISBP2LQ93073 1101 aaKnown RBP13.65□□□□□ -0.22
TRIM47-202ENST00000585333 C18orf8Q96DM3 657 aa13.65□□□□□ -0.22
TRIM47-202ENST00000585333 PPP1R13BQ96KQ4 1090 aa13.65□□□□□ -0.22
TRIM47-202ENST00000585333 KLHL5Q96PQ7 755 aa13.65□□□□□ -0.22
TRIM47-202ENST00000585333 ADAM22Q9P0K1 906 aa13.65□□□□□ -0.22
TRIM47-202ENST00000585333 UXTQ9UBK9 157 aaPredicted RBP13.65□□□□□ -0.22
TRIM47-202ENST00000585333 NME7Q9Y5B8 376 aa13.65□□□□□ -0.22
TRIM47-202ENST00000585333 GBF1Q92538 1859 aa13.65□□□□□ -0.22
TRIM47-202ENST00000585333 SZT2Q5T011 3432 aa13.65□□□□□ -0.22
TRIM47-202ENST00000585333 TRIOBPQ9H2D6 2365 aa13.65□□□□□ -0.22
TRIM47-202ENST00000585333 FGF19O95750 216 aa13.64□□□□□ -0.23
TRIM47-202ENST00000585333 FTLP02792 175 aaPredicted RBP13.64□□□□□ -0.23
TRIM47-202ENST00000585333 PLEKP08567 350 aaPredicted RBP13.64□□□□□ -0.23
TRIM47-202ENST00000585333 TMEM253P0C7T8 217 aa13.64□□□□□ -0.23
TRIM47-202ENST00000585333 CSH1P0DML2 217 aa13.64□□□□□ -0.23
TRIM47-202ENST00000585333 CSH2P0DML3 217 aa13.64□□□□□ -0.23
TRIM47-202ENST00000585333 HAPLN1P10915 354 aaPredicted RBP13.64□□□□□ -0.23
TRIM47-202ENST00000585333 HOXA9P31269 272 aa13.64□□□□□ -0.23
TRIM47-202ENST00000585333 PPP3CCP48454 512 aa13.64□□□□□ -0.23
TRIM47-202ENST00000585333 VAV2P52735 878 aa13.64□□□□□ -0.23
TRIM47-202ENST00000585333 EPHB3P54753 998 aa13.64□□□□□ -0.23
TRIM47-202ENST00000585333 ERVFC1P60507 584 aa13.64□□□□□ -0.23
TRIM47-202ENST00000585333 GPC5P78333 572 aa13.64□□□□□ -0.23
TRIM47-202ENST00000585333 GFPT1Q06210 699 aaPredicted RBP13.64□□□□□ -0.23
TRIM47-202ENST00000585333 PDE4CQ08493 712 aa13.64□□□□□ -0.23
TRIM47-202ENST00000585333 ZNF268Q14587 947 aaPredicted RBP13.64□□□□□ -0.23
TRIM47-202ENST00000585333 TAF12Q16514 161 aa13.64□□□□□ -0.23
TRIM47-202ENST00000585333 ZNF697Q5TEC3 545 aa13.64□□□□□ -0.23
TRIM47-202ENST00000585333 DENND1BQ6P3S1 775 aa13.64□□□□□ -0.23
TRIM47-202ENST00000585333 RNF19BQ6ZMZ0 732 aa13.64□□□□□ -0.23
TRIM47-202ENST00000585333 ZNF662Q6ZS27 426 aa13.64□□□□□ -0.23
TRIM47-202ENST00000585333 CLEC20AQ6ZU45 233 aa13.64□□□□□ -0.23
TRIM47-202ENST00000585333 TMEM110Q86TL2 294 aa13.64□□□□□ -0.23
TRIM47-202ENST00000585333 LRRTM3Q86VH5 581 aa13.64□□□□□ -0.23
TRIM47-202ENST00000585333 TTC30AQ86WT1 665 aa13.64□□□□□ -0.23
TRIM47-202ENST00000585333 PASD1Q8IV76 773 aa13.64□□□□□ -0.23
TRIM47-202ENST00000585333 SCN4BQ8IWT1 228 aa13.64□□□□□ -0.23
TRIM47-202ENST00000585333 IRGQQ8WZA9 623 aa13.64□□□□□ -0.23
TRIM47-202ENST00000585333 SEPT5Q99719 369 aaPredicted RBP13.64□□□□□ -0.23
TRIM47-202ENST00000585333 SLC4A5Q9BY07 1137 aa13.64□□□□□ -0.23
TRIM47-202ENST00000585333 CYP4F11Q9HBI6 524 aa13.64□□□□□ -0.23
TRIM47-202ENST00000585333 ACP6Q9NPH0 428 aa13.64□□□□□ -0.23
TRIM47-202ENST00000585333 AVENQ9NQS1 362 aaPredicted RBP13.64□□□□□ -0.23
TRIM47-202ENST00000585333 CNGB3Q9NQW8 809 aa13.64□□□□□ -0.23
TRIM47-202ENST00000585333 ST7Q9NRC1 585 aa13.64□□□□□ -0.23
TRIM47-202ENST00000585333 PARVAQ9NVD7 372 aa13.64□□□□□ -0.23
TRIM47-202ENST00000585333 DZANK1Q9NVP4 752 aa13.64□□□□□ -0.23
TRIM47-202ENST00000585333 UVRAGQ9P2Y5 699 aa13.64□□□□□ -0.23
TRIM47-202ENST00000585333 COLQQ9Y215 455 aaPredicted RBP13.64□□□□□ -0.23
TRIM47-202ENST00000585333 A0A0A6YYK5 440 aaPredicted RBP13.63□□□□□ -0.23
TRIM47-202ENST00000585333 SPDYE4A6NLX3 237 aa13.63□□□□□ -0.23
TRIM47-202ENST00000585333 HCRTO43612 131 aa13.63□□□□□ -0.23
TRIM47-202ENST00000585333 LRG1P02750 347 aa13.63□□□□□ -0.23
TRIM47-202ENST00000585333 GLI1P08151 1106 aa13.63□□□□□ -0.23
TRIM47-202ENST00000585333 POU2F2P09086 479 aa13.63□□□□□ -0.23
TRIM47-202ENST00000585333 HNRNPA1P09651 372 aaKnown RBP eCLIP13.63□□□□□ -0.23
TRIM47-202ENST00000585333 OR4Q2P0C623 313 aa13.63□□□□□ -0.23
TRIM47-202ENST00000585333 GABRB2P47870 512 aa13.63□□□□□ -0.23
TRIM47-202ENST00000585333 RPL34P49207 117 aaKnown RBP13.63□□□□□ -0.23
TRIM47-202ENST00000585333 PSEN1P49768 467 aa13.63□□□□□ -0.23
TRIM47-202ENST00000585333 MAP3K7CLP57077 242 aa13.63□□□□□ -0.23
TRIM47-202ENST00000585333 ARHGAP29Q52LW3 1261 aa13.63□□□□□ -0.23
TRIM47-202ENST00000585333 EFHC1Q5JVL4 640 aa13.63□□□□□ -0.23
TRIM47-202ENST00000585333 RAD9BQ6WBX8 426 aa13.63□□□□□ -0.23
TRIM47-202ENST00000585333 DENND5BQ6ZUT9 1274 aa13.63□□□□□ -0.23
TRIM47-202ENST00000585333 PIGZQ86VD9 579 aa13.63□□□□□ -0.23
TRIM47-202ENST00000585333 MCOLN2Q8IZK6 566 aa13.63□□□□□ -0.23
TRIM47-202ENST00000585333 NUP93Q8N1F7 819 aa13.63□□□□□ -0.23
TRIM47-202ENST00000585333 LEMD2Q8NC56 503 aa13.63□□□□□ -0.23
TRIM47-202ENST00000585333 PDZD8Q8NEN9 1154 aa13.63□□□□□ -0.23
TRIM47-202ENST00000585333 UBA3Q8TBC4 463 aa13.63□□□□□ -0.23
TRIM47-202ENST00000585333 TMEM209Q96SK2 561 aa13.63□□□□□ -0.23
TRIM47-202ENST00000585333 NCAPGQ9BPX3 1015 aa13.63□□□□□ -0.23
TRIM47-202ENST00000585333 ZSWIM1Q9BR11 485 aa13.63□□□□□ -0.23
TRIM47-202ENST00000585333 NSUN3Q9H649 340 aaKnown RBP13.63□□□□□ -0.23
TRIM47-202ENST00000585333 TLE6Q9H808 572 aa13.63□□□□□ -0.23
TRIM47-202ENST00000585333 SPTLC3Q9NUV7 552 aa13.63□□□□□ -0.23
TRIM47-202ENST00000585333 FBXW11Q9UKB1 542 aa13.63□□□□□ -0.23
TRIM47-202ENST00000585333 PCDHA13Q9Y5I0 950 aa13.63□□□□□ -0.23
TRIM47-202ENST00000585333 ADGRG1Q9Y653 693 aa13.63□□□□□ -0.23
TRIM47-202ENST00000585333 PLXNA4Q9HCM2 1894 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 BTNL10A8MVZ5 291 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 F8VP50 259 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 CLDN5O00501 218 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 TGM5O43548 720 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 XYLBO75191 536 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 ARHGEF15O94989 841 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 RPL17P18621 184 aaKnown RBP13.62□□□□□ -0.23
TRIM47-202ENST00000585333 CYP2F1P24903 491 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 DEKP35659 375 aaKnown RBP13.62□□□□□ -0.23
TRIM47-202ENST00000585333 DUSP4Q13115 394 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 PABPC1LQ4VXU2 614 aaKnown RBP13.62□□□□□ -0.23
TRIM47-202ENST00000585333 DNAJC24Q6P3W2 148 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 LILRA6Q6PI73 481 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 PAQR9Q6ZVX9 377 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 MON1BQ7L1V2 547 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 ARCQ7LC44 396 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 TADA2BQ86TJ2 420 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms